Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj9C655T12 Lonicera japonica HOM05D005545 ORTHO05D006917 6.6e-102 374.0 185 100.0
CSS0008348 Camellia sinensis var. sinensis HOM05D005545 ORTHO05D006917 1.6e-44 183.3 187 56.1
CSS0040259 Camellia sinensis var. sinensis HOM05D005545 ORTHO05D006917 4.8e-44 181.8 187 55.6
Dinv32030 Davidia involucrata HOM05D005545 ORTHO05D006917 1.5e-42 176.8 183 54.6
Actinidia10163 Actinidia chinensis HOM05D005545 ORTHO05D006917 9.4e-40 167.5 183 55.2
Hma1.2p1_2114F.1_g314270 Hydrangea macrophylla HOM05D005545 ORTHO05D006917 1.6e-39 166.8 193 52.8
Lsat_1_v5_gn_1_115460 Lactuca sativa HOM05D005545 ORTHO05D006917 3.6e-39 165.6 188 51.1
Actinidia10168 Actinidia chinensis HOM05D005545 ORTHO05D006917 3.9e-38 162.2 184 52.7
Thhalv10010067m.g Eutrema salsugineum HOM05D005545 ORTHO05D006917 1.1e-35 154.1 209 46.9
Carub.0005s2108 Capsella rubella HOM05D005545 ORTHO05D006917 2.0e-34 149.8 203 45.8
AT3G54460 Arabidopsis thaliana HOM05D005545 ORTHO05D006917 5.9e-34 148.3 201 48.3
Cfa010879 Carpinus fangiana HOM05D005545 ORTHO05D006917 5.9e-34 148.3 192 43.2
TAR636G1823 Trochodendron aralioides HOM05D005545 ORTHO05D006917 1.7e-33 146.7 196 46.9
vmacro13750 Vaccinium macrocarpon HOM05D005545 ORTHO05D006917 2.9e-33 146.0 181 48.6
AL5G35510 Arabidopsis lyrata HOM05D005545 ORTHO05D006917 6.5e-33 144.8 198 47.0
Nn7g36650 Nelumbo nucifera HOM05D005545 ORTHO05D006917 2.5e-32 142.9 189 46.0
QL04p018188 Quercus lobata HOM05D005545 ORTHO05D006917 3.2e-32 142.5 183 47.5
QL04p014793 Quercus lobata HOM05D005545 ORTHO05D006917 4.2e-32 142.1 183 47.0
TWI63G0062 Tripterygium wilfordii HOM05D005545 ORTHO05D006917 7.2e-32 141.4 182 44.0
Hund15735 Selenicereus undatus HOM05D005545 ORTHO05D006917 9.4e-32 141.0 187 44.4
Cc00_g05310 Coffea canephora HOM05D005545 ORTHO05D006917 2.1e-31 139.8 182 48.9
DCAR_003247 Daucus carota HOM05D005545 ORTHO05D006917 2.7e-31 139.4 181 48.1
BolC4t25380H Brassica oleracea HOM05D005545 ORTHO05D006917 4.7e-31 138.7 191 46.1
Aa31sc35G110 Aethionema arabicum HOM05D005545 ORTHO05D006917 6.1e-31 138.3 206 43.2
Haze_03077 Corylus avellana HOM05D005545 ORTHO05D006917 7.9e-31 137.9 181 42.5
SGA_v2.0_scaffold319G48544 Striga asiatica HOM05D005545 ORTHO05D006917 1.0e-30 137.5 184 45.7
Sp5g07960 Schrenkiella parvula HOM05D005545 ORTHO05D006917 1.4e-30 137.1 213 43.2
SGA_v2.0_scaffold124G33619 Striga asiatica HOM05D005545 ORTHO05D006917 1.4e-30 137.1 183 44.3
BcaC02g09068 Brassica carinata HOM05D005545 ORTHO05D006917 1.8e-30 136.7 191 45.5
C04p38060 Brassica napus HOM05D005545 ORTHO05D006917 1.8e-30 136.7 191 45.5
CiPaw.13G013000 Carya illinoinensis HOM05D005545 ORTHO05D006917 2.3e-30 136.3 181 45.9
MD07G1038300 Malus domestica HOM05D005545 ORTHO05D006917 3.0e-30 136.0 182 47.3
Nn2g14866 Nelumbo nucifera HOM05D005545 ORTHO05D006917 3.0e-30 136.0 200 47.0
Potri.003G197701 Populus trichocarpa HOM05D005545 ORTHO05D006917 8.8e-30 134.4 183 46.4
PGR044G1070 Punica granatum HOM05D005545 ORTHO05D006917 1.5e-29 133.7 220 40.0
Sabra03G0147100 Salix brachista HOM05D005545 ORTHO05D006917 2.0e-29 133.3 183 45.9
Sc10g0004410 Simmondsia chinensis HOM05D005545 ORTHO05D006917 2.0e-29 133.3 182 44.5
MSTRG.20517 Avicennia marina HOM05D005545 ORTHO05D006917 2.6e-29 132.9 187 46.5
BraA04t16237Z Brassica rapa HOM05D005545 ORTHO05D006917 2.6e-29 132.9 184 44.6
Potri.T125006 Populus trichocarpa HOM05D005545 ORTHO05D006917 4.4e-29 132.1 183 45.9
A04p05370 Brassica napus HOM05D005545 ORTHO05D006917 7.4e-29 131.3 184 44.6
HanXRQChr11g0341811 Helianthus annuus HOM05D005545 ORTHO05D006917 1.3e-28 130.6 188 42.0
Ciclev10004162m.g Citrus clementina HOM05D005545 ORTHO05D006917 1.7e-28 130.2 181 45.9
Ca_19084_v3 Cicer arietinum L. HOM05D005545 ORTHO05D006917 2.2e-28 129.8 180 43.3
Sed0011144 Sechium edule HOM05D005545 ORTHO05D006917 2.2e-28 129.8 201 40.8
GSVIVG01013494001 Vitis vinifera HOM05D005545 ORTHO05D006917 2.2e-28 129.8 177 46.9
Atru.chr12.1348 Acer truncatum HOM05D005545 ORTHO05D006917 2.8e-28 129.4 185 43.8
Lalb_Chr04g0264091 Lupinus albus HOM05D005545 ORTHO05D006917 4.8e-28 128.6 190 43.7
Phvul.005G027400 Phaseolus vulgaris HOM05D005545 ORTHO05D006917 6.3e-28 128.3 180 43.9
ClCG05G026770 Citrullus lanatus HOM05D005545 ORTHO05D006917 8.2e-28 127.9 198 40.9
CsaV3_5G036710 Cucumis sativus L. HOM05D005545 ORTHO05D006917 8.2e-28 127.9 190 41.1
Oeu040901.1 Olea europaea HOM05D005545 ORTHO05D006917 8.2e-28 127.9 193 41.5
Nitab4.5_0000320g0210 Nicotiana tabacum HOM05D005545 ORTHO05D006917 1.1e-27 127.5 188 46.8
EL10Ac2g02815 Beta vulgaris HOM05D005545 ORTHO05D006917 1.4e-27 127.1 181 46.4
COL.COLO4_21694 Corchorus olitorius HOM05D005545 ORTHO05D006917 1.4e-27 127.1 185 44.3
Glyma.04G138300 Glycine max HOM05D005545 ORTHO05D006917 1.4e-27 127.1 182 42.3
Manes.04G160000 Manihot esculenta HOM05D005545 ORTHO05D006917 1.8e-27 126.7 179 41.9
THA.LOC104824192 Tarenaya hassleriana HOM05D005545 ORTHO05D006917 1.8e-27 126.7 200 40.5
MELO3C012467.2 Cucumis melo HOM05D005545 ORTHO05D006917 2.4e-27 126.3 194 39.7
Prupe.2G034500 Prunus persica HOM05D005545 ORTHO05D006917 2.4e-27 126.3 198 48.0
VMungo1080G1303 Vigna mungo HOM05D005545 ORTHO05D006917 4.1e-27 125.6 179 44.7
SalBow5G5421 Salvia bowleyana HOM05D005545 ORTHO05D006917 5.3e-27 125.2 184 43.5
MD02G1288500 Malus domestica HOM05D005545 ORTHO05D006917 1.6e-26 123.6 178 45.5
Aqoxy2G00348 Aquilegia oxysepala HOM05D005545 ORTHO05D006917 2.0e-26 123.2 190 37.4
arahy.Tifrunner.gnm1.ann1.598UNF Arachis hypogaea HOM05D005545 ORTHO05D006917 2.0e-26 123.2 189 42.9
Sopen11g001260 Solanum pennellii HOM05D005545 ORTHO05D006917 2.0e-26 123.2 183 41.0
RcHm_v2.0_Chr1g0323901 Rosa chinensis HOM05D005545 ORTHO05D006917 4.5e-26 122.1 182 44.5
arahy.Tifrunner.gnm1.ann1.3MZP5F Arachis hypogaea HOM05D005545 ORTHO05D006917 7.7e-26 121.3 188 42.6
arahy.Tifrunner.gnm1.ann1.HR7PRR Arachis hypogaea HOM05D005545 ORTHO05D006917 7.7e-26 121.3 189 42.3
Glyma.11G154800 Glycine max HOM05D005545 ORTHO05D006917 7.7e-26 121.3 183 42.1
Nitab4.5_0003414g0020 Nicotiana tabacum HOM05D005545 ORTHO05D006917 7.7e-26 121.3 188 44.1
Solyc11g005250.3 Solanum lycopersicum HOM05D005545 ORTHO05D006917 1.3e-25 120.6 183 40.4
Medtr3g017390 Medicago truncatula HOM05D005545 ORTHO05D006917 3.8e-25 119.0 178 39.9
Migut.B01225 Erythranthe guttata HOM05D005545 ORTHO05D006917 6.5e-25 118.2 183 38.8
Gohir.D04G014900 Gossypium hirsutum HOM05D005545 ORTHO05D006917 1.5e-24 117.1 185 41.6
Gorai.012G017400 Gossypium raimondii HOM05D005545 ORTHO05D006917 1.5e-24 117.1 185 41.6
Thecc.10G162000 Theobroma cacao HOM05D005545 ORTHO05D006917 1.5e-24 117.1 185 41.1
TPR.G17827 Trifolium pratense HOM05D005545 ORTHO05D006917 1.9e-24 116.7 178 42.1
Ah.12g062880 Amaranthus hybridus HOM05D005545 ORTHO05D006917 2.5e-24 116.3 179 40.2
CDE12G0276 Ceratophyllum demersum HOM05D005545 ORTHO05D006917 5.5e-24 115.2 189 39.7
Psat5g217720 Pisum sativum HOM05D005545 ORTHO05D006917 9.4e-24 114.4 180 42.2
Rhsim07G0066900 Rhododendron simsii HOM05D005545 ORTHO05D006917 3.6e-23 112.5 199 42.2
AUR62037185 Chenopodium quinoa HOM05D005545 ORTHO05D006917 4.7e-23 112.1 192 39.1
CANSAT56G1029 Cannabis sativa HOM05D005545 ORTHO05D006917 1.4e-22 110.5 187 38.0
FAN03G2070 Fragaria x ananassa HOM05D005545 ORTHO05D006917 3.0e-22 109.4 185 40.5
FAN06G4324 Fragaria x ananassa HOM05D005545 ORTHO05D006917 5.2e-22 108.6 182 41.8
CAN.G1074.9 Capsicum annuum HOM05D005545 ORTHO05D006917 6.3e-20 101.7 189 39.2
Duzib114G0439 Durio zibethinus HOM05D005545 ORTHO05D006917 1.4e-19 100.5 184 35.9
HPP92_001016 Vanilla planifolia HOM05D005545 ORTHO05D006917 2.4e-19 99.8 184 37.0
Lj3g0017403 Lotus japonicus HOM05D005545 ORTHO05D006917 5.3e-19 98.6 178 39.9
SHI03991 Sapria himalayana HOM05D005545 ORTHO05D006917 1.2e-18 97.4 184 38.0
CARHR164360 Cardamine hirsuta HOM05D005545 ORTHO05D006917 1.7e-17 93.6 74 62.2
PSO384G2575 Papaver somniferum HOM05D005545 ORTHO05D006917 2.9e-17 92.8 189 35.4
CAN.G694.97 Capsicum annuum HOM05D001043 ORTHO05D001555 5.0e-17 92.0 215 35.3
Peaxi162Scf00025g01520 Petunia axillaris HOM05D005545 ORTHO05D006917 8.5e-17 91.3 78 61.5
ATR0745G085 Amborella trichopoda HOM05D005545 ORTHO05D006917 1.1e-16 90.9 191 33.5
unitig_749.g13482 Utricularia gibba HOM05D005545 ORTHO05D006917 3.1e-11 72.8 85 47.1
Os01g0952200 Oryza sativa ssp. japonica HOM05D005545 ORTHO05D006917 3.5e-10 69.3 80 47.5
Zm00001eb140820 Zea mays HOM05D005545 ORTHO05D006917 5.9e-10 68.6 77 45.5
Zm00001eb140840 Zea mays HOM05D005545 ORTHO05D006917 5.5e-08 62.0 78 42.3
AUR62026877 Chenopodium quinoa HOM05D005545 ORTHO05D006917 7.2e-08 61.6 59 57.6


User provided reference genes

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