Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj9A683T26 Lonicera japonica HOM05D006305 ORTHO05D007984 1.8e-216 755.7 404 100.0
GSVIVG01000016001 Vitis vinifera HOM05D006305 ORTHO05D007984 1.7e-142 510.0 392 73.2
Dinv23970 Davidia involucrata HOM05D006305 ORTHO05D007984 8.3e-142 507.7 413 70.9
QL03p004578 Quercus lobata HOM05D006305 ORTHO05D007984 2.7e-140 502.7 397 72.3
CiPaw.07G015100 Carya illinoinensis HOM05D006305 ORTHO05D007984 8.6e-139 497.7 383 68.7
Cc02_g33730 Coffea canephora HOM05D006305 ORTHO05D007984 7.3e-138 494.6 376 71.5
Eucgr.H04470 Eucalyptus grandis HOM05D006305 ORTHO05D007984 6.2e-137 491.5 387 72.6
TWI56G0624 Tripterygium wilfordii HOM05D006305 ORTHO05D007984 6.2e-137 491.5 398 70.6
Manes.09G164300 Manihot esculenta HOM05D006305 ORTHO05D007984 8.9e-136 487.6 394 66.5
Lsat_1_v5_gn_2_67520 Lactuca sativa HOM05D006305 ORTHO05D007984 1.5e-135 486.9 364 72.0
CSS0021232 Camellia sinensis var. sinensis HOM05D006305 ORTHO05D007984 2.0e-135 486.5 404 68.8
CANSAT54G0217 Cannabis sativa HOM05D006305 ORTHO05D007984 2.6e-135 486.1 386 67.9
FAN05G5097 Fragaria x ananassa HOM05D006305 ORTHO05D007984 7.6e-135 484.6 397 67.8
FAN14G0751 Fragaria x ananassa HOM05D006305 ORTHO05D007984 1.7e-134 483.4 397 67.8
FAN14G5210 Fragaria x ananassa HOM05D006305 ORTHO05D007984 1.7e-134 483.4 397 67.8
MD04G1208500 Malus domestica HOM05D006305 ORTHO05D007984 1.7e-134 483.4 400 69.0
RcHm_v2.0_Chr3g0454231 Rosa chinensis HOM05D006305 ORTHO05D007984 1.7e-134 483.4 384 68.2
CSS0018445 Camellia sinensis var. sinensis HOM05D006305 ORTHO05D007984 2.9e-134 482.6 404 68.3
PGR031G3204 Punica granatum HOM05D006305 ORTHO05D007984 4.9e-134 481.9 385 70.4
EL10Ac4g09328 Beta vulgaris HOM05D006305 ORTHO05D007984 1.4e-133 480.3 385 66.0
Nitab4.5_0002756g0070 Nicotiana tabacum HOM05D006305 ORTHO05D007984 2.4e-133 479.6 393 67.2
FvH4_6g05460 Fragaria vesca HOM05D006305 ORTHO05D007984 3.2e-133 479.2 397 67.5
Rhsim05G0143900 Rhododendron simsii HOM05D006305 ORTHO05D007984 5.4e-133 478.4 391 69.1
Atru.chr2.472 Acer truncatum HOM05D006305 ORTHO05D007984 7.1e-133 478.0 388 67.3
FAN05G0068 Fragaria x ananassa HOM05D006305 ORTHO05D007984 2.1e-132 476.5 397 67.0
Medtr1g082570 Medicago truncatula HOM05D006305 ORTHO05D007984 2.7e-132 476.1 388 65.7
TAR636G3548 Trochodendron aralioides HOM05D006305 ORTHO05D007984 6.0e-132 474.9 404 67.8
Ca_10097_v3 Cicer arietinum L. HOM05D006305 ORTHO05D007984 1.3e-131 473.8 388 64.9
PGSC0003DMG400024658 Solanum tuberosum HOM05D006305 ORTHO05D007984 3.9e-131 472.2 399 66.9
CAN.G479.41 Capsicum annuum HOM05D006305 ORTHO05D007984 8.6e-131 471.1 398 65.1
HanXRQChr15g0472081 Helianthus annuus HOM05D006305 ORTHO05D007984 1.9e-130 469.9 369 71.3
SGA_v2.0_scaffold34G13953 Striga asiatica HOM05D006305 ORTHO05D007984 1.9e-130 469.9 384 65.6
Gorai.013G204500 Gossypium raimondii HOM05D006305 ORTHO05D007984 2.5e-130 469.5 392 66.8
Phvul.007G181700 Phaseolus vulgaris HOM05D006305 ORTHO05D007984 2.5e-130 469.5 401 64.1
arahy.Tifrunner.gnm1.ann1.84BFE2 Arachis hypogaea HOM05D006305 ORTHO05D007984 3.3e-130 469.2 396 68.4
ECA238G3439 Erigeron canadensis HOM05D006305 ORTHO05D007984 7.3e-130 468.0 373 71.0
Gohir.A13G173500 Gossypium hirsutum HOM05D006305 ORTHO05D007984 7.3e-130 468.0 396 66.4
Thecc.05G307300 Theobroma cacao HOM05D006305 ORTHO05D007984 1.6e-129 466.8 409 62.8
Potri.005G036700 Populus trichocarpa HOM05D006305 ORTHO05D007984 2.1e-129 466.5 406 68.2
Solyc03g115580.4 Solanum lycopersicum HOM05D006305 ORTHO05D007984 2.8e-129 466.1 397 65.2
DCAR_029432 Daucus carota HOM05D006305 ORTHO05D007984 3.6e-129 465.7 393 66.7
Glyma.10G156300 Glycine max HOM05D006305 ORTHO05D007984 8.1e-129 464.5 393 63.6
SalBow6G6985 Salvia bowleyana HOM05D006305 ORTHO05D007984 8.1e-129 464.5 394 63.5
Sabra05G0037100 Salix brachista HOM05D006305 ORTHO05D007984 1.1e-128 464.2 406 67.2
Migut.F01514 Erythranthe guttata HOM05D006305 ORTHO05D007984 1.8e-128 463.4 404 63.9
ClCG08G002270 Citrullus lanatus HOM05D006305 ORTHO05D007984 2.4e-128 463.0 379 65.7
Gohir.D13G179200 Gossypium hirsutum HOM05D006305 ORTHO05D007984 2.4e-128 463.0 392 66.1
Peaxi162Scf00274g00026 Petunia axillaris HOM05D006305 ORTHO05D007984 2.4e-128 463.0 427 61.6
Psat0ss6702g0320 Pisum sativum HOM05D006305 ORTHO05D007984 3.1e-128 462.6 401 62.6
Sopen03g034570 Solanum pennellii HOM05D006305 ORTHO05D007984 1.2e-127 460.7 397 65.7
VMungo0720G1654 Vigna mungo HOM05D006305 ORTHO05D007984 1.2e-127 460.7 382 67.8
Hund21683 Selenicereus undatus HOM05D006305 ORTHO05D007984 2.6e-127 459.5 372 68.5
vmacro19639 Vaccinium macrocarpon HOM05D006305 ORTHO05D007984 2.6e-127 459.5 455 60.4
arahy.Tifrunner.gnm1.ann1.39Z7HW Arachis hypogaea HOM05D006305 ORTHO05D007984 3.4e-127 459.1 397 67.0
Lj5g0026498 Lotus japonicus HOM05D006305 ORTHO05D007984 4.4e-127 458.8 378 66.1
Hma1.2p1_0666F.1_g199520 Hydrangea macrophylla HOM05D006305 ORTHO05D007984 1.7e-126 456.8 319 73.0
Ah.06g189130 Amaranthus hybridus HOM05D006305 ORTHO05D007984 1.4e-125 453.8 377 67.1
MSTRG.306 Avicennia marina HOM05D006305 ORTHO05D007984 9.3e-125 451.1 397 64.0
Sp3g04060 Schrenkiella parvula HOM05D006305 ORTHO05D007984 2.1e-124 449.9 383 62.1
Carub.0003s0446 Capsella rubella HOM05D006305 ORTHO05D007984 4.6e-124 448.7 373 66.8
FAN02G0061 Fragaria x ananassa HOM05D006305 ORTHO05D007984 1.3e-123 447.2 395 64.6
CDE11G1040 Ceratophyllum demersum HOM05D006305 ORTHO05D007984 1.7e-123 446.8 371 63.3
A05p42370 Brassica napus HOM05D006305 ORTHO05D007984 5.1e-123 445.3 378 64.8
BraA05t23013Z Brassica rapa HOM05D006305 ORTHO05D007984 5.1e-123 445.3 378 64.8
BcaC05g30009 Brassica carinata HOM05D006305 ORTHO05D007984 1.5e-122 443.7 375 63.2
C05p61980 Brassica napus HOM05D006305 ORTHO05D007984 1.5e-122 443.7 375 63.2
BcaC05g30168 Brassica carinata HOM05D006305 ORTHO05D007984 3.3e-122 442.6 408 63.0
BolC5t34858H Brassica oleracea HOM05D006305 ORTHO05D007984 3.3e-122 442.6 375 62.9
Thhalv10020823m.g Eutrema salsugineum HOM05D006305 ORTHO05D007984 3.3e-122 442.6 371 66.8
Lalb_Chr02g0148341 Lupinus albus HOM05D006305 ORTHO05D007984 3.3e-122 442.6 395 62.8
HPP92_015091 Vanilla planifolia HOM05D006305 ORTHO05D007984 3.3e-122 442.6 379 64.4
Aqoxy5G04250 Aquilegia oxysepala HOM05D006305 ORTHO05D007984 2.8e-121 439.5 394 61.7
Aa31LG5G15590 Aethionema arabicum HOM05D006305 ORTHO05D007984 3.4e-119 432.6 420 59.3
AL3G15630 Arabidopsis lyrata HOM05D006305 ORTHO05D007984 9.9e-119 431.0 390 59.7
Ciclev10001229m.g Citrus clementina HOM05D006305 ORTHO05D007984 2.9e-118 429.5 407 62.9
THA.LOC104820089 Tarenaya hassleriana HOM05D006305 ORTHO05D007984 1.4e-117 427.2 384 60.9
Prupe.6G329400 Prunus persica HOM05D006305 ORTHO05D007984 2.4e-117 426.4 272 78.3
unitig_746.g26625 Utricularia gibba HOM05D006305 ORTHO05D007984 2.3e-115 419.9 302 71.5
ATR0620G066 Amborella trichopoda HOM05D006305 ORTHO05D007984 3.0e-115 419.5 397 60.7
AUR62005086 Chenopodium quinoa HOM05D006305 ORTHO05D007984 3.0e-115 419.5 294 73.5
AUR62000888 Chenopodium quinoa HOM05D006305 ORTHO05D007984 8.7e-115 417.9 282 75.2
BcaC05g30019 Brassica carinata HOM05D006305 ORTHO05D007984 1.4e-112 410.6 375 60.0
Cfa006552 Carpinus fangiana HOM05D006305 ORTHO05D007984 1.5e-111 407.1 291 76.3
Nn3g18889 Nelumbo nucifera HOM05D006305 ORTHO05D007984 2.0e-111 406.8 281 76.2
COL.COLO4_19840 Corchorus olitorius HOM05D006305 ORTHO05D007984 6.4e-110 401.7 247 82.6
PSO782G4398 Papaver somniferum HOM05D006305 ORTHO05D007984 2.4e-109 399.8 396 59.6
PSO063G7033 Papaver somniferum HOM05D006305 ORTHO05D007984 5.5e-109 398.7 400 61.8
MELO3C025022.2 Cucumis melo HOM05D006305 ORTHO05D007984 2.1e-108 396.7 296 69.3
Haze_04230 Corylus avellana HOM05D006305 ORTHO05D007984 4.6e-108 395.6 406 60.3
MBI04_g21739_MAGBIO Magnolia biondii HOM05D006305 ORTHO05D007984 5.1e-107 392.1 270 73.3
Sed0018566 Sechium edule HOM05D006305 ORTHO05D007984 5.1e-107 392.1 297 68.4
CsaV3_6G002610 Cucumis sativus L. HOM05D006305 ORTHO05D007984 6.7e-107 391.7 290 69.0
Os10g0518900 Oryza sativa ssp. japonica HOM05D006305 ORTHO05D007984 1.5e-103 380.6 289 66.4
Zm00001eb043410 Zea mays HOM05D006305 ORTHO05D007984 2.0e-103 380.2 419 51.1
AT3G05210 Arabidopsis thaliana HOM05D006305 ORTHO05D007984 5.5e-93 345.5 288 67.7
Pp3c6_29610 Physcomitrium patens HOM05D006305 ORTHO05D007984 5.5e-93 345.5 408 49.5
SMO146G0211 Selaginella moellendorffii HOM05D006305 ORTHO05D007984 1.6e-92 344.0 217 78.3
Ciclev10002028m.g Citrus clementina HOM05D006305 ORTHO05D007984 5.1e-91 339.0 255 71.4
CBR_g4857 Chara braunii HOM05D006305 ORTHO05D007984 9.7e-90 334.7 279 60.9
Mapoly0128s0010 Marchantia polymorpha HOM05D006305 ORTHO05D007984 6.3e-89 332.0 425 49.6
Sc16g0008400 Simmondsia chinensis HOM05D006305 ORTHO05D007984 2.4e-88 330.1 254 69.7
Nitab4.5_0001211g0080 Nicotiana tabacum HOM05D006305 ORTHO05D007984 4.5e-87 325.9 407 48.6
TPR.G22794 Trifolium pratense HOM05D006305 ORTHO05D007984 4.2e-85 319.3 240 70.8
Ciclev10003828m.g Citrus clementina HOM05D006305 ORTHO05D007984 9.4e-85 318.2 314 58.6
Duzib106G1918 Durio zibethinus HOM05D006305 ORTHO05D007984 9.7e-82 308.1 396 50.5
Hma1.2p1_0666F.1_g199530 Hydrangea macrophylla HOM05D006305 ORTHO05D007984 2.2e-81 307.0 199 78.9
Cpa.g.sc1183.2 Carica papaya HOM05D006305 ORTHO05D007984 3.1e-80 303.1 413 47.0
MBI04_g44620_MAGBIO Magnolia biondii HOM05D006305 ORTHO05D007984 4.7e-68 262.7 140 89.3
CARHR079550 Cardamine hirsuta HOM05D006305 ORTHO05D007984 8.0e-68 261.9 161 79.5
AagrBONN_evm.TU.Sc2ySwM_369.531 Anthoceros agrestis HOM05D006305 ORTHO05D007984 2.0e-63 247.3 217 59.0
Cre03.g196651 Chlamydomonas reinhardtii HOM05D006305 ORTHO05D007984 2.9e-62 243.4 210 57.1
Ciclev10003373m.g Citrus clementina HOM05D006305 ORTHO05D007984 7.2e-61 238.8 303 51.8
Ciclev10003460m.g Citrus clementina HOM05D006305 ORTHO05D007984 1.8e-59 234.2 255 56.1
PRCOL_00003423 Prasinoderma coloniale HOM05D006305 ORTHO05D007984 2.0e-42 177.6 191 46.1
Cfa026476 Carpinus fangiana HOM05D006305 ORTHO05D007984 6.4e-41 172.6 321 35.2
SalBow6G3462 Salvia bowleyana HOM05D006305 ORTHO05D007984 5.4e-32 142.9 158 51.3
MCO01G606 Micromonas commoda HOM05D006305 ORTHO05D007984 6.0e-31 139.4 204 36.3
TPR.G7405 Trifolium pratense HOM05D006305 ORTHO05D007984 1.0e-30 138.7 159 51.6
Glyma.20G232002 Glycine max HOM05D006305 ORTHO05D007984 4.7e-20 103.2 76 71.1
Pp3c16_18520 Physcomitrium patens HOM05D006305 ORTHO05D007984 6.9e-11 72.8 43 72.1
Cpa.g.sc48.16 Carica papaya HOM05D006305 ORTHO05D007984 2.6e-10 70.9 102 48.0
MBI04_g33407_MAGBIO Magnolia biondii HOM05D006305 ORTHO05D007984 1.9e-08 64.7 120 42.5
MELO3C033326.2 Cucumis melo HOM05D006305 ORTHO05D168382 2.1e-07 61.2 74 47.3


User provided reference genes

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