Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj9A645G79 Lonicera japonica HOM05D004944 ORTHO05D005989 2.0e-71 272.3 138 100.0
Duzib128G1953 Durio zibethinus HOM05D004944 ORTHO05D005989 1.7e-22 109.8 57 89.5
Hma1.2p1_0184F.1_g081120 Hydrangea macrophylla HOM05D004944 ORTHO05D005989 2.9e-22 109.0 55 89.1
ECA232G0518 Erigeron canadensis HOM05D004944 ORTHO05D005989 1.1e-21 107.1 57 84.2
Gohir.A13G013200 Gossypium hirsutum HOM05D004944 ORTHO05D005989 7.3e-21 104.4 56 85.7
Lsat_1_v5_gn_9_47141 Lactuca sativa HOM05D004944 ORTHO05D005989 7.3e-21 104.4 55 81.8
MD07G1077800 Malus domestica HOM05D004944 ORTHO05D005989 7.3e-21 104.4 55 85.5
Prupe.2G028500 Prunus persica HOM05D004944 ORTHO05D005989 7.3e-21 104.4 55 85.5
Sabra03G0149500 Salix brachista HOM05D004944 ORTHO05D005989 7.3e-21 104.4 55 87.3
SalBow2G1212 Salvia bowleyana HOM05D004944 ORTHO05D005989 7.3e-21 104.4 55 85.5
THA.LOC104819120 Tarenaya hassleriana HOM05D004944 ORTHO05D005989 7.3e-21 104.4 54 85.2
Medtr3g022850 Medicago truncatula HOM05D004944 ORTHO05D005989 1.2e-20 103.6 55 85.5
ClCG05G020810 Citrullus lanatus HOM05D004944 ORTHO05D005989 1.6e-20 103.2 56 80.4
Gorai.013G015500 Gossypium raimondii HOM05D004944 ORTHO05D005989 1.6e-20 103.2 57 84.2
Prupe.7G020900 Prunus persica HOM05D004944 ORTHO05D005989 1.6e-20 103.2 58 81.0
VMungo1080G1012 Vigna mungo HOM05D004944 ORTHO05D005989 1.6e-20 103.2 55 85.5
CANSAT80G2771 Cannabis sativa HOM05D004944 ORTHO05D005989 2.1e-20 102.8 55 85.5
SHI03976 Sapria himalayana HOM05D004944 ORTHO05D005989 2.1e-20 102.8 62 71.0
Aa31LG2G19510 Aethionema arabicum HOM05D004944 ORTHO05D005989 2.8e-20 102.4 54 87.0
Cpa.g.sc197.13 Carica papaya HOM05D004944 ORTHO05D005989 2.8e-20 102.4 63 77.8
DCAR_009210 Daucus carota HOM05D004944 ORTHO05D005989 2.8e-20 102.4 53 88.7
Dinv32057 Davidia involucrata HOM05D004944 ORTHO05D005989 2.8e-20 102.4 55 83.6
HanXRQChr05g0145061 Helianthus annuus HOM05D004944 ORTHO05D005989 2.8e-20 102.4 127 48.0
Thecc.10G005400 Theobroma cacao HOM05D004944 ORTHO05D005989 2.8e-20 102.4 57 84.2
CSS0024385 Camellia sinensis var. sinensis HOM05D004944 ORTHO05D005989 3.6e-20 102.1 52 86.5
Migut.N01817 Erythranthe guttata HOM05D004944 ORTHO05D005989 3.6e-20 102.1 55 81.8
FAN03G3505 Fragaria x ananassa HOM05D004944 ORTHO05D005989 3.6e-20 102.1 55 83.6
Lj3g0016020 Lotus japonicus HOM05D004944 ORTHO05D005989 3.6e-20 102.1 55 85.5
RcHm_v2.0_Chr1g0319541 Rosa chinensis HOM05D004944 ORTHO05D005989 3.6e-20 102.1 55 83.6
SGA_v2.0_scaffold5G02935 Striga asiatica HOM05D004944 ORTHO05D005989 3.6e-20 102.1 55 83.6
Potri.003G202300 Populus trichocarpa HOM05D004944 ORTHO05D005989 6.1e-20 101.3 55 85.5
CiPaw.13G010200 Carya illinoinensis HOM05D004944 ORTHO05D005989 1.4e-19 100.1 55 81.8
FvH4_7g02220 Fragaria vesca HOM05D004944 ORTHO05D005989 1.4e-19 100.1 55 83.6
Gohir.D13G014300 Gossypium hirsutum HOM05D004944 ORTHO05D005989 1.4e-19 100.1 57 82.5
MBI17_g33308_MAGBIO Magnolia biondii HOM05D004944 ORTHO05D005989 1.4e-19 100.1 54 83.3
QL04p013327 Quercus lobata HOM05D004944 ORTHO05D005989 1.4e-19 100.1 54 81.5
CsaV3_5G036480 Cucumis sativus L. HOM05D004944 ORTHO05D005989 1.8e-19 99.8 56 75.0
FAN01G0470 Fragaria x ananassa HOM05D004944 ORTHO05D005989 2.3e-19 99.4 55 80.0
Lalb_Chr04g0263921 Lupinus albus HOM05D004944 ORTHO05D005989 2.3e-19 99.4 55 81.8
MD02G1296200 Malus domestica HOM05D004944 ORTHO05D005989 2.3e-19 99.4 55 81.8
Sed0005559 Sechium edule HOM05D004944 ORTHO05D005989 2.3e-19 99.4 55 78.2
GSVIVG01000850001 Vitis vinifera HOM05D004944 ORTHO05D005989 2.3e-19 99.4 55 78.2
CARHR238770 Cardamine hirsuta HOM05D004944 ORTHO05D005989 3.1e-19 99.0 54 79.6
MBI17_g24522_MAGBIO Magnolia biondii HOM05D004944 ORTHO05D005989 3.1e-19 99.0 54 81.5
Nn7g36468 Nelumbo nucifera HOM05D004944 ORTHO05D005989 3.1e-19 99.0 55 80.0
Thhalv10024629m.g Eutrema salsugineum HOM05D004944 ORTHO05D005989 4.0e-19 98.6 54 81.5
Atru.chr11.2502 Acer truncatum HOM05D004944 ORTHO05D005989 5.2e-19 98.2 55 81.8
arahy.Tifrunner.gnm1.ann1.L5CKR4 Arachis hypogaea HOM05D004944 ORTHO05D005989 5.2e-19 98.2 55 81.8
arahy.Tifrunner.gnm1.ann1.YV81B1 Arachis hypogaea HOM05D004944 ORTHO05D005989 5.2e-19 98.2 55 81.8
Ciclev10030882m.g Citrus clementina HOM05D004944 ORTHO05D005989 5.2e-19 98.2 55 80.0
BcaB01g01761 Brassica carinata HOM05D004944 ORTHO05D005989 6.8e-19 97.8 54 83.3
BcaC04g21249 Brassica carinata HOM05D004944 ORTHO05D005989 6.8e-19 97.8 54 83.3
A09p26720 Brassica napus HOM05D004944 ORTHO05D005989 6.8e-19 97.8 54 83.3
C09p33850 Brassica napus HOM05D004944 ORTHO05D005989 6.8e-19 97.8 54 83.3
BolC9t56223H Brassica oleracea HOM05D004944 ORTHO05D005989 6.8e-19 97.8 54 83.3
BraA09t38244Z Brassica rapa HOM05D004944 ORTHO05D005989 6.8e-19 97.8 54 83.3
COL.COLO4_25841 Corchorus olitorius HOM05D004944 ORTHO05D005989 6.8e-19 97.8 57 77.2
MELO3C012446.2 Cucumis melo HOM05D004944 ORTHO05D005989 6.8e-19 97.8 55 78.2
Eucgr.G03259 Eucalyptus grandis HOM05D004944 ORTHO05D005989 6.8e-19 97.8 55 80.0
Sc10g0004240 Simmondsia chinensis HOM05D004944 ORTHO05D005989 6.8e-19 97.8 54 79.6
Aqoxy1G00293 Aquilegia oxysepala HOM05D004944 ORTHO05D005989 8.9e-19 97.4 55 80.0
Cfa010847 Carpinus fangiana HOM05D004944 ORTHO05D005989 8.9e-19 97.4 54 83.3
SEGI_11905 Sequoiadendron giganteum HOM05D004944 ORTHO05D005989 8.9e-19 97.4 55 76.4
Cc02_g29470 Coffea canephora HOM05D004944 ORTHO05D005989 1.2e-18 97.1 55 76.4
TAR636G1724 Trochodendron aralioides HOM05D004944 ORTHO05D005989 1.2e-18 97.1 55 76.4
Actinidia06272 Actinidia chinensis HOM05D004944 ORTHO05D005989 1.5e-18 96.7 55 78.2
Haze_03113 Corylus avellana HOM05D004944 ORTHO05D005989 1.5e-18 96.7 55 80.0
BcaNung04417 Brassica carinata HOM05D000343 ORTHO05D003187 2.6e-18 95.9 54 75.9
AUR62026814 Chenopodium quinoa HOM05D004944 ORTHO05D005989 2.6e-18 95.9 54 79.6
AUR62037239 Chenopodium quinoa HOM05D004944 ORTHO05D005989 2.6e-18 95.9 54 79.6
FAN06G2455 Fragaria x ananassa HOM05D004944 ORTHO05D005989 2.6e-18 95.9 55 80.0
Peaxi162Scf00309g00011 Petunia axillaris HOM05D004944 ORTHO05D005989 2.6e-18 95.9 61 70.5
EL10Ac2g02867 Beta vulgaris HOM05D004944 ORTHO05D005989 3.4e-18 95.5 54 77.8
Glyma.11G150100 Glycine max HOM05D004944 ORTHO05D005989 3.4e-18 95.5 55 80.0
Rhsim07G0062200 Rhododendron simsii HOM05D004944 ORTHO05D005989 3.4e-18 95.5 58 75.9
RcHm_v2.0_Chr3g0488831 Rosa chinensis HOM05D004944 ORTHO05D005989 5.8e-18 94.7 55 76.4
PGR031G0610 Punica granatum HOM05D004944 ORTHO05D005989 7.5e-18 94.4 55 76.4
Solyc01g068340.3 Solanum lycopersicum HOM05D004944 ORTHO05D005989 7.5e-18 94.4 66 66.7
AL7G21230 Arabidopsis lyrata HOM05D004944 ORTHO05D005989 9.8e-18 94.0 54 75.9
AT4G30870 Arabidopsis thaliana HOM05D004944 ORTHO05D005989 9.8e-18 94.0 54 75.9
CAN.G410.46 Capsicum annuum HOM05D004944 ORTHO05D005989 9.8e-18 94.0 55 76.4
Sp6g04870 Schrenkiella parvula HOM05D004944 ORTHO05D005989 9.8e-18 94.0 54 81.5
TWI15G1108 Tripterygium wilfordii HOM05D004944 ORTHO05D005989 9.8e-18 94.0 55 78.2
Nitab4.5_0000316g0180 Nicotiana tabacum HOM05D004944 ORTHO05D005989 1.7e-17 93.2 55 74.5
Nitab4.5_0006307g0060 Nicotiana tabacum HOM05D004944 ORTHO05D005989 1.7e-17 93.2 55 74.5
Sopen01g030310 Solanum pennellii HOM05D004944 ORTHO05D005989 1.7e-17 93.2 55 76.4
CDE01G0132 Ceratophyllum demersum HOM05D004944 ORTHO05D005989 2.2e-17 92.8 75 60.0
Hund15708 Selenicereus undatus HOM05D004944 ORTHO05D005989 2.2e-17 92.8 55 74.5
HPP92_001459 Vanilla planifolia HOM05D004944 ORTHO05D005989 2.2e-17 92.8 62 72.6
vmacro13723 Vaccinium macrocarpon HOM05D004944 ORTHO05D005989 3.7e-17 92.0 67 67.2
Carub.0007s0968 Capsella rubella HOM05D004944 ORTHO05D005989 4.9e-17 91.7 54 75.9
PSO782G0837 Papaver somniferum HOM05D004944 ORTHO05D005989 4.9e-17 91.7 55 72.7
Carub.0007s3598 Capsella rubella HOM05D004944 ORTHO05D005989 8.3e-17 90.9 54 75.9
Manes.04G164000 Manihot esculenta HOM05D004944 ORTHO05D005989 8.3e-17 90.9 53 79.2
Cfa010848 Carpinus fangiana HOM05D004944 ORTHO05D005989 1.4e-16 90.1 57 75.4
Thhalv10024809m.g Eutrema salsugineum HOM05D004944 ORTHO05D005989 2.4e-16 89.4 54 72.2
Zm00001eb141350 Zea mays HOM05D004944 ORTHO05D005989 5.4e-16 88.2 54 74.1
PSO135G0630 Papaver somniferum HOM05D004944 ORTHO05D005989 2.0e-15 86.3 55 69.1
Zm00001eb141330 Zea mays HOM05D004944 ORTHO05D005989 4.6e-15 85.1 54 70.4
Mapoly0005s0161 Marchantia polymorpha HOM05D004944 ORTHO05D005989 2.3e-14 82.8 57 61.4
PSO339G0509 Papaver somniferum HOM05D004944 ORTHO05D005989 6.6e-14 81.3 55 67.3
Pp3c16_12330 Physcomitrium patens HOM05D004944 ORTHO05D005989 8.6e-14 80.9 54 63.0
PSO384G2132 Papaver somniferum HOM05D004944 ORTHO05D005989 1.1e-13 80.5 55 67.3
Os01g0948100 Oryza sativa ssp. japonica HOM05D004944 ORTHO05D005989 1.5e-13 80.1 62 58.1
AagrBONN_evm.TU.Sc2ySwM_228.3522 Anthoceros agrestis HOM05D004944 ORTHO05D005989 4.3e-13 78.6 59 64.4
CBR_g44528 Chara braunii HOM05D004944 ORTHO05D005989 2.8e-12 75.9 57 54.4
SMO337G0105 Selaginella moellendorffii HOM05D004944 ORTHO05D005989 1.8e-11 73.2 55 60.0
AT5G39770 Arabidopsis thaliana HOM05D004944 ORTHO05D005989 2.4e-08 62.8 38 73.7
PRCOL_00004679 Prasinoderma coloniale HOM05D004944 ORTHO05D005989 6.0e-07 58.2 60 50.0
Haze_26725 Corylus avellana HOM05D004944 ORTHO05D005989 1.0e-06 57.4 56 48.2


User provided reference genes

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