Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj7C88G8 Lonicera japonica HOM05D001054 ORTHO05D007110 0.0e+00 1098.6 535 100.0
MSTRG.23690 Avicennia marina HOM05D001054 ORTHO05D007110 1.2e-281 972.6 531 88.3
Hma1.2p1_0017F.1_g012090 Hydrangea macrophylla HOM05D001054 ORTHO05D007110 2.5e-279 964.9 531 87.2
Oeu013280.1 Olea europaea HOM05D001054 ORTHO05D007110 9.6e-279 963.0 531 87.4
Nn7g37208 Nelumbo nucifera HOM05D001054 ORTHO05D007110 3.4e-276 954.5 537 84.9
HanXRQChr14g0441861 Helianthus annuus HOM05D001054 ORTHO05D007110 4.5e-276 954.1 539 85.5
DCAR_010834 Daucus carota HOM05D001054 ORTHO05D007110 2.9e-275 951.4 548 83.6
PGSC0003DMG400023692 Solanum tuberosum HOM05D001054 ORTHO05D007110 4.9e-275 950.7 531 86.3
Solyc10g080040.3 Solanum lycopersicum HOM05D001054 ORTHO05D007110 1.1e-274 949.5 531 86.3
SalBow6G1211 Salvia bowleyana HOM05D001054 ORTHO05D007110 2.4e-274 948.3 532 85.2
Sopen10g030650 Solanum pennellii HOM05D001054 ORTHO05D007110 9.3e-274 946.4 531 85.9
Migut.H00367 Erythranthe guttata HOM05D001054 ORTHO05D007110 4.6e-273 944.1 536 85.8
Cc07_g06840 Coffea canephora HOM05D001054 ORTHO05D007110 6.0e-273 943.7 539 84.2
TAR625G0225 Trochodendron aralioides HOM05D001054 ORTHO05D007110 3.3e-271 937.9 537 84.0
SGA_v2.0_scaffold72G24093 Striga asiatica HOM05D001054 ORTHO05D007110 3.7e-270 934.5 535 83.9
TWI09G0178 Tripterygium wilfordii HOM05D001054 ORTHO05D007110 3.1e-269 931.4 537 82.7
Nitab4.5_0006689g0010 Nicotiana tabacum HOM05D001054 ORTHO05D007110 5.3e-269 930.6 531 84.9
Cpa.g.sc6.46 Carica papaya HOM05D001054 ORTHO05D007110 2.0e-268 928.7 526 83.8
PSO541G5579 Papaver somniferum HOM05D001054 ORTHO05D007110 2.6e-268 928.3 534 83.5
Manes.13G113500 Manihot esculenta HOM05D001054 ORTHO05D007110 4.5e-268 927.5 532 83.3
Nitab4.5_0002331g0050 Nicotiana tabacum HOM05D001054 ORTHO05D007110 5.8e-268 927.2 531 84.7
PSO675G2247 Papaver somniferum HOM05D001054 ORTHO05D007110 1.0e-267 926.4 534 83.3
Peaxi162Scf00365g00936 Petunia axillaris HOM05D001054 ORTHO05D007110 1.0e-267 926.4 529 84.5
FvH4_1g17270 Fragaria vesca HOM05D001054 ORTHO05D007110 2.9e-267 924.9 534 82.8
Lsat_1_v5_gn_2_83701 Lactuca sativa HOM05D001054 ORTHO05D007110 3.8e-267 924.5 541 83.7
Thecc.01G069100 Theobroma cacao HOM05D001054 ORTHO05D007110 6.5e-267 923.7 536 83.8
TAR628G0943 Trochodendron aralioides HOM05D001054 ORTHO05D007110 6.5e-267 923.7 537 82.3
MBI19_g10811_MAGBIO Magnolia biondii HOM05D001054 ORTHO05D007110 1.1e-266 922.9 519 85.2
PGR004G0129 Punica granatum HOM05D001054 ORTHO05D007110 3.2e-266 921.4 535 82.8
DCAR_021470 Daucus carota HOM05D001054 ORTHO05D007110 4.6e-265 917.5 522 84.7
CANSAT01G2549 Cannabis sativa HOM05D001054 ORTHO05D007110 6.0e-265 917.1 532 82.3
Prupe.6G223800 Prunus persica HOM05D001054 ORTHO05D007110 1.0e-264 916.4 517 84.1
FAN19G1445 Fragaria x ananassa HOM05D001054 ORTHO05D007110 1.3e-264 916.0 543 81.2
Rhsim10G0102900 Rhododendron simsii HOM05D001054 ORTHO05D007110 1.8e-264 915.6 591 76.8
Gorai.008G080600 Gossypium raimondii HOM05D001054 ORTHO05D007110 1.1e-263 912.9 534 83.3
Aqoxy2G00045 Aquilegia oxysepala HOM05D001054 ORTHO05D007110 2.5e-263 911.8 540 82.2
Sc16g0004970 Simmondsia chinensis HOM05D001054 ORTHO05D007110 3.3e-263 911.4 535 82.1
CsaV3_6G043910 Cucumis sativus L. HOM05D001054 ORTHO05D007110 5.7e-263 910.6 533 81.6
Sed0014779 Sechium edule HOM05D001054 ORTHO05D007110 9.6e-263 909.8 534 81.1
Eucgr.C03692 Eucalyptus grandis HOM05D001054 ORTHO05D007110 1.3e-262 909.4 523 82.8
Atru.chr3.194 Acer truncatum HOM05D001054 ORTHO05D007110 3.7e-262 907.9 537 81.2
Gohir.D12G073300 Gossypium hirsutum HOM05D001054 ORTHO05D007110 3.7e-262 907.9 534 82.8
ClCG01G017380 Citrullus lanatus HOM05D001054 ORTHO05D007110 4.8e-262 907.5 534 81.5
FAN23G1327 Fragaria x ananassa HOM05D001054 ORTHO05D007110 4.8e-262 907.5 556 79.0
RcHm_v2.0_Chr2g0107461 Rosa chinensis HOM05D001054 ORTHO05D007110 4.8e-262 907.5 590 76.1
FAN26G1436 Fragaria x ananassa HOM05D001054 ORTHO05D007110 6.3e-262 907.1 569 77.7
Cfa004102 Carpinus fangiana HOM05D001054 ORTHO05D007110 1.8e-261 905.6 535 82.2
Duzib264G0621 Durio zibethinus HOM05D001054 ORTHO05D007110 6.9e-261 903.7 536 81.9
Atru.chr3.165 Acer truncatum HOM05D001054 ORTHO05D007110 1.2e-260 902.9 540 80.7
Potri.007G053000 Populus trichocarpa HOM05D001054 ORTHO05D007110 1.0e-259 899.8 532 80.3
Eucgr.C03920 Eucalyptus grandis HOM05D001054 ORTHO05D007110 1.7e-259 899.0 512 82.8
Sed0024674 Sechium edule HOM05D001054 ORTHO05D007110 1.7e-259 899.0 534 80.1
Aa31LG6G14390 Aethionema arabicum HOM05D001054 ORTHO05D007110 5.0e-259 897.5 546 80.0
CDE04G1953 Ceratophyllum demersum HOM05D001054 ORTHO05D007110 5.0e-259 897.5 518 83.8
MELO3C007616.2 Cucumis melo HOM05D001054 ORTHO05D007110 6.5e-259 897.1 560 77.7
COL.COLO4_11542 Corchorus olitorius HOM05D001054 ORTHO05D007110 5.5e-258 894.0 535 80.7
Ciclev10025341m.g Citrus clementina HOM05D001054 ORTHO05D007110 1.2e-257 892.9 532 80.1
Carub.0007s0278 Capsella rubella HOM05D001054 ORTHO05D007110 1.6e-257 892.5 540 79.6
CiPaw.01G007000 Carya illinoinensis HOM05D001054 ORTHO05D007110 2.1e-257 892.1 534 81.1
AUR62040267 Chenopodium quinoa HOM05D001054 ORTHO05D007110 4.6e-257 891.0 538 80.7
SGA_v2.0_scaffold15G07420 Striga asiatica HOM05D001054 ORTHO05D007110 4.6e-257 891.0 532 82.0
THA.LOC104807624 Tarenaya hassleriana HOM05D001054 ORTHO05D007110 7.9e-257 890.2 523 81.6
AT4G37510 Arabidopsis thaliana HOM05D001054 ORTHO05D007110 1.0e-256 889.8 542 79.7
AUR62003982 Chenopodium quinoa HOM05D001054 ORTHO05D007110 1.3e-256 889.4 538 80.3
Sabra07G0046600 Salix brachista HOM05D001054 ORTHO05D007110 1.3e-256 889.4 532 80.3
CARHR245910 Cardamine hirsuta HOM05D001054 ORTHO05D007110 6.7e-256 887.1 542 79.2
AL7G13250 Arabidopsis lyrata HOM05D001054 ORTHO05D007110 1.5e-255 885.9 540 79.4
EL10Ac6g15648 Beta vulgaris HOM05D001054 ORTHO05D007110 1.9e-255 885.6 536 80.0
Thhalv10024858m.g Eutrema salsugineum HOM05D001054 ORTHO05D007110 1.9e-255 885.6 542 78.8
Sp7g35190 Schrenkiella parvula HOM05D001054 ORTHO05D007110 2.2e-254 882.1 544 77.9
unitig_0.g506 Utricularia gibba HOM05D001054 ORTHO05D007110 6.3e-254 880.6 469 89.1
ATR1096G061 Amborella trichopoda HOM05D001054 ORTHO05D007110 1.8e-253 879.0 522 80.8
CSS0030463 Camellia sinensis var. sinensis HOM05D001054 ORTHO05D007110 1.8e-253 879.0 522 82.6
Haze_15309 Corylus avellana HOM05D001054 ORTHO05D007110 1.8e-253 879.0 555 78.2
Glyma.01G192200 Glycine max HOM05D001054 ORTHO05D007110 1.8e-248 862.4 527 79.9
Glyma.11G049900 Glycine max HOM05D001054 ORTHO05D007110 3.0e-248 861.7 523 80.1
Hund13932 Selenicereus undatus HOM05D001054 ORTHO05D007110 6.7e-248 860.5 536 77.4
Lj2g0007837 Lotus japonicus HOM05D001054 ORTHO05D007110 8.8e-248 860.1 538 78.4
BcaNung03665 Brassica carinata HOM05D001054 ORTHO05D007110 5.7e-247 857.4 539 77.6
C01p01620 Brassica napus HOM05D001054 ORTHO05D007110 5.7e-247 857.4 539 77.6
A01p01450 Brassica napus HOM05D001054 ORTHO05D007110 7.4e-247 857.1 537 77.5
BraA01t00139Z Brassica rapa HOM05D001054 ORTHO05D007110 1.3e-246 856.3 537 77.3
Psat2g170280 Pisum sativum HOM05D001054 ORTHO05D007110 2.4e-245 852.0 538 76.6
TPR.G20955 Trifolium pratense HOM05D001054 ORTHO05D007110 5.3e-245 850.9 542 76.9
Medtr5g016070 Medicago truncatula HOM05D001054 ORTHO05D007110 1.5e-244 849.4 534 78.1
Lalb_Chr05g0213551 Lupinus albus HOM05D001054 ORTHO05D007110 3.4e-244 848.2 528 78.0
BolC1t00157H Brassica oleracea HOM05D001054 ORTHO05D007110 5.9e-244 847.4 542 76.4
Ca_24720_v3 Cicer arietinum L. HOM05D001054 ORTHO05D007110 5.9e-244 847.4 503 80.5
Phvul.002G012600 Phaseolus vulgaris HOM05D001054 ORTHO05D007110 3.2e-242 841.6 533 77.3
BcaNung05084 Brassica carinata HOM05D001054 ORTHO05D007110 1.2e-241 839.7 548 75.2
VMungo1215G2035 Vigna mungo HOM05D001054 ORTHO05D007110 2.1e-241 839.0 533 78.4
Lalb_Chr09g0323511 Lupinus albus HOM05D001054 ORTHO05D007110 3.9e-240 834.7 545 75.4
arahy.Tifrunner.gnm1.ann1.5YK3TE Arachis hypogaea HOM05D001054 ORTHO05D007110 5.7e-239 830.9 530 76.6
Os01g0810100 Oryza sativa ssp. japonica HOM05D001054 ORTHO05D007110 9.7e-239 830.1 482 81.1
HPP92_018502 Vanilla planifolia HOM05D001054 ORTHO05D007110 4.8e-238 827.8 533 75.8
arahy.Tifrunner.gnm1.ann1.AR4BCX Arachis hypogaea HOM05D001054 ORTHO05D007110 2.0e-236 822.4 544 74.6
arahy.Tifrunner.gnm1.ann1.S94KHE Arachis hypogaea HOM05D001054 ORTHO05D007110 7.7e-236 820.5 559 73.0
arahy.Tifrunner.gnm1.ann1.UKA06W Arachis hypogaea HOM05D001054 ORTHO05D007110 1.0e-235 820.1 544 74.6
arahy.Tifrunner.gnm1.ann1.V4EKGG Arachis hypogaea HOM05D001054 ORTHO05D007110 8.5e-235 817.0 559 72.8
arahy.Tifrunner.gnm1.ann1.SB8Z2H Arachis hypogaea HOM05D001054 ORTHO05D007110 5.2e-232 807.7 553 73.1
Lj4g0019986 Lotus japonicus HOM05D001054 ORTHO05D007110 2.7e-225 785.4 535 73.1
VMungo0251G1033 Vigna mungo HOM05D001054 ORTHO05D007110 4.7e-225 784.6 533 72.2
Phvul.003G236900 Phaseolus vulgaris HOM05D001054 ORTHO05D007110 9.8e-223 776.9 535 71.0
HPP92_017544 Vanilla planifolia HOM05D001054 ORTHO05D007110 1.8e-221 772.7 476 77.3
ECA238G1085 Erigeron canadensis HOM05D001054 ORTHO05D007110 7.7e-220 767.3 398 89.2
Ah.02g125600 Amaranthus hybridus HOM05D001054 ORTHO05D007110 6.3e-214 747.7 426 81.9
TPR.G23864 Trifolium pratense HOM05D001054 ORTHO05D007110 2.7e-212 742.3 538 68.6
Medtr4g095410 Medicago truncatula HOM05D001054 ORTHO05D007110 2.9e-211 738.8 532 69.5
Zm00001eb150280 Zea mays HOM05D001054 ORTHO05D007110 4.4e-207 724.9 452 76.8
Dinv26904 Davidia involucrata HOM05D001054 ORTHO05D007110 4.9e-206 721.5 407 85.7
Gohir.A12G075200 Gossypium hirsutum HOM05D001054 ORTHO05D007110 3.6e-201 705.3 435 79.3
Actinidia36442 Actinidia chinensis HOM05D001054 ORTHO05D007110 1.9e-194 682.9 518 67.2
Psat4g083600 Pisum sativum HOM05D001054 ORTHO05D007110 1.9e-186 656.4 398 77.6
CSS0024742 Camellia sinensis var. sinensis HOM05D001054 ORTHO05D007110 5.2e-184 648.3 331 91.2
HPP92_017568 Vanilla planifolia HOM05D001054 ORTHO05D007110 5.1e-155 552.0 397 70.8
AL5G41245 Arabidopsis lyrata HOM05D001054 ORTHO05D007110 1.3e-153 547.4 406 68.5
GSVIVG01000148001 Vitis vinifera HOM05D001054 ORTHO05D007110 1.6e-153 547.0 284 88.7
Mapoly0005s0153 Marchantia polymorpha HOM05D001054 ORTHO05D007110 1.4e-152 543.9 496 56.0
Pp3c5_10700 Physcomitrium patens HOM05D001054 ORTHO05D007110 6.5e-150 535.0 477 56.2
vmacro05387 Vaccinium macrocarpon HOM05D001054 ORTHO05D007110 4.8e-137 492.3 348 70.1
SEGI_29234 Sequoiadendron giganteum HOM05D001054 ORTHO05D007110 7.9e-132 474.9 437 56.8
AagrBONN_evm.TU.Sc2ySwM_368.879 Anthoceros agrestis HOM05D001054 ORTHO05D007110 1.3e-129 467.6 451 54.1
SMO119G0428 Selaginella moellendorffii HOM05D001054 ORTHO05D007110 2.2e-129 466.8 451 52.3
Glyma.05G104100 Glycine max HOM05D001054 ORTHO05D007110 1.7e-121 440.7 334 68.3
vmacro05388 Vaccinium macrocarpon HOM05D001054 ORTHO05D007110 2.0e-114 417.2 269 75.8
FAN28G0670 Fragaria x ananassa HOM05D001054 ORTHO05D007110 5.6e-93 345.9 229 76.4
MD15G1293700 Malus domestica HOM05D001054 ORTHO05D007110 3.0e-91 340.1 181 85.1
Duzib147G0207 Durio zibethinus HOM05D001054 ORTHO05D007110 1.3e-86 324.7 181 84.0
AL7G13080 Arabidopsis lyrata HOM05D001054 ORTHO05D007110 3.4e-74 283.5 172 76.7
SEGI_10508 Sequoiadendron giganteum HOM05D001054 ORTHO05D007110 2.4e-56 224.2 135 75.6
Eucgr.C03694 Eucalyptus grandis HOM05D001054 ORTHO05D026867 7.4e-45 186.0 103 83.5
Actinidia11996 Actinidia chinensis HOM05D001054 ORTHO05D007110 2.8e-44 184.1 115 77.4
Actinidia11995 Actinidia chinensis HOM05D001054 ORTHO05D038022 5.3e-35 153.3 81 87.7
Oeu038701.1 Olea europaea HOM05D001054 ORTHO05D038022 6.3e-28 129.8 67 88.1
AT2G48121 Arabidopsis thaliana HOM05D001054 ORTHO05D026867 3.0e-22 110.9 57 87.7
A03p65210 Brassica napus HOM05D001054 ORTHO05D026867 6.7e-22 109.8 66 77.3
BraA03t15579Z Brassica rapa HOM05D001054 ORTHO05D026867 6.7e-22 109.8 66 77.3
C07p62420 Brassica napus HOM05D001054 ORTHO05D007110 2.0e-18 98.2 53 84.9
BcaNung02059 Brassica carinata HOM05D001054 ORTHO05D007110 1.4e-16 92.0 50 80.0
Sed0007349 Sechium edule HOM05D001054 ORTHO05D007110 2.8e-12 77.8 78 50.0


User provided reference genes

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