Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj7C288T6 Lonicera japonica HOM05D004901 ORTHO05D005592 0.0e+00 1432.2 738 100.0
Dinv02586 Davidia involucrata HOM05D004901 ORTHO05D005592 7.7e-178 628.2 753 52.2
QL09p004928 Quercus lobata HOM05D004901 ORTHO05D005592 2.2e-156 557.0 799 47.7
Cfa008133 Carpinus fangiana HOM05D004901 ORTHO05D005592 6.0e-154 548.9 800 45.4
GSVIVG01034779001 Vitis vinifera HOM05D004901 ORTHO05D005592 8.6e-153 545.0 816 44.4
Oeu021225.1 Olea europaea HOM05D004901 ORTHO05D005592 4.1e-147 526.2 794 44.2
Manes.18G103400 Manihot esculenta HOM05D004901 ORTHO05D005592 4.7e-143 512.7 796 45.0
Prupe.1G551100 Prunus persica HOM05D004901 ORTHO05D005592 1.8e-142 510.8 799 45.2
Ciclev10000033m.g Citrus clementina HOM05D004901 ORTHO05D005592 5.8e-141 505.8 804 44.3
TAR628G1246 Trochodendron aralioides HOM05D004901 ORTHO05D005592 6.0e-138 495.7 855 42.5
Atru.chr13.2408 Acer truncatum HOM05D004901 ORTHO05D005592 5.1e-137 492.7 795 43.1
FAN03G3444 Fragaria x ananassa HOM05D004901 ORTHO05D005592 5.2e-134 482.6 799 44.6
Rhsim11G0056100 Rhododendron simsii HOM05D004901 ORTHO05D005592 2.6e-133 480.3 762 44.2
CSS0009856 Camellia sinensis var. sinensis HOM05D004901 ORTHO05D005592 5.8e-133 479.2 605 49.8
RcHm_v2.0_Chr7g0228871 Rosa chinensis HOM05D004901 ORTHO05D005592 2.9e-132 476.9 807 43.6
FAN06G0910 Fragaria x ananassa HOM05D004901 ORTHO05D005592 4.9e-132 476.1 799 43.9
FvH4_7g03750 Fragaria vesca HOM05D004901 ORTHO05D005592 8.4e-132 475.3 799 43.7
Potri.013G109600 Populus trichocarpa HOM05D004901 ORTHO05D005592 4.6e-130 469.5 790 42.9
DCAR_011526 Daucus carota HOM05D004901 ORTHO05D005592 1.1e-126 458.4 800 41.9
Duzib177G0087 Durio zibethinus HOM05D004901 ORTHO05D005592 1.8e-126 457.6 789 44.5
Sopen11g010870 Solanum pennellii HOM05D004901 ORTHO05D005592 1.2e-122 444.9 798 41.9
Gohir.A13G120700 Gossypium hirsutum HOM05D004901 ORTHO05D005592 2.7e-122 443.7 786 42.7
Gorai.013G139300 Gossypium raimondii HOM05D004901 ORTHO05D005592 3.9e-121 439.9 791 42.6
Gohir.D13G124700 Gossypium hirsutum HOM05D004901 ORTHO05D005592 8.7e-121 438.7 791 42.5
Migut.C01287 Erythranthe guttata HOM05D004901 ORTHO05D005592 1.1e-120 438.3 749 40.9
MD15G1404400 Malus domestica HOM05D004901 ORTHO05D005592 9.6e-120 435.3 812 41.5
CAN.G259.2 Capsicum annuum HOM05D004901 ORTHO05D005592 7.6e-117 425.6 797 40.4
Nn5g27609 Nelumbo nucifera HOM05D004901 ORTHO05D005592 2.2e-116 424.1 921 36.8
MSTRG.1544 Avicennia marina HOM05D004901 ORTHO05D005592 2.7e-114 417.2 792 39.8
Eucgr.F02585 Eucalyptus grandis HOM05D004901 ORTHO05D005592 4.3e-112 409.8 800 39.0
MBI17_g21472_MAGBIO Magnolia biondii HOM05D004901 ORTHO05D005592 5.6e-112 409.5 814 39.7
SalBow7G4726 Salvia bowleyana HOM05D004901 ORTHO05D005592 2.8e-111 407.1 765 39.3
CANSAT56G0037 Cannabis sativa HOM05D004901 ORTHO05D005592 1.8e-110 404.4 795 38.6
SGA_v2.0_scaffold24G10583 Striga asiatica HOM05D004901 ORTHO05D005592 8.4e-108 395.6 759 40.1
Haze_13904 Corylus avellana HOM05D004901 ORTHO05D005592 2.1e-106 391.0 553 45.2
PGR042G2824 Punica granatum HOM05D004901 ORTHO05D005592 6.0e-106 389.4 786 37.9
THA.LOC104816395 Tarenaya hassleriana HOM05D004901 ORTHO05D005592 1.8e-105 387.9 767 39.6
Cc00_g06540 Coffea canephora HOM05D004901 ORTHO05D005592 2.2e-103 380.9 755 38.7
ECA233G3640 Erigeron canadensis HOM05D004901 ORTHO05D000001 2.8e-103 380.6 771 38.8
AT1G35530 Arabidopsis thaliana HOM05D004901 ORTHO05D005592 2.4e-102 377.5 781 36.9
Lsat_1_v5_gn_8_141780 Lactuca sativa HOM05D004901 ORTHO05D005592 3.4e-101 373.6 746 39.7
Aqoxy6G00145 Aquilegia oxysepala HOM05D004901 ORTHO05D005592 2.5e-99 367.5 858 37.4
Sc23g0001370 Simmondsia chinensis HOM05D004901 ORTHO05D005592 7.2e-99 365.9 825 37.0
Thecc.08G186400 Theobroma cacao HOM05D004901 ORTHO05D005592 3.6e-98 363.6 579 44.0
PSO170G4536 Papaver somniferum HOM05D004901 ORTHO05D005592 1.8e-97 361.3 846 36.8
PSO782G5557 Papaver somniferum HOM05D004901 ORTHO05D005592 3.9e-97 360.1 851 37.1
A05p23720 Brassica napus HOM05D004901 ORTHO05D005592 9.1e-94 349.0 790 36.5
Carub.0001s3315 Capsella rubella HOM05D004901 ORTHO05D005592 1.0e-92 345.5 785 36.3
Thhalv10002370m.g Eutrema salsugineum HOM05D004901 ORTHO05D005592 2.2e-92 344.4 784 36.4
Sp1g30300 Schrenkiella parvula HOM05D004901 ORTHO05D005592 5.0e-92 343.2 790 35.9
BcaC05g27729 Brassica carinata HOM05D004901 ORTHO05D005592 3.9e-89 333.6 789 36.1
C05p37130 Brassica napus HOM05D004901 ORTHO05D005592 3.9e-89 333.6 789 36.1
BcaB03g13661 Brassica carinata HOM05D004901 ORTHO05D005592 1.5e-88 331.6 772 35.9
BraA05t21240Z Brassica rapa HOM05D004901 ORTHO05D005592 1.5e-88 331.6 827 34.8
AL1G50380 Arabidopsis lyrata HOM05D004901 ORTHO05D005592 2.6e-88 330.9 781 34.3
COL.COLO4_12801 Corchorus olitorius HOM05D004901 ORTHO05D005592 2.6e-88 330.9 970 33.5
Thhalv10001810m.g Eutrema salsugineum HOM05D004901 ORTHO05D005592 3.3e-88 330.5 781 35.3
BolC5t32466H Brassica oleracea HOM05D004901 ORTHO05D005592 3.7e-87 327.0 830 34.9
Phvul.011G000500 Phaseolus vulgaris HOM05D004901 ORTHO05D005592 1.3e-84 318.5 754 37.5
CARHR034280 Cardamine hirsuta HOM05D004901 ORTHO05D005592 2.5e-83 314.3 770 34.3
Lj3g0009157 Lotus japonicus HOM05D004901 ORTHO05D005592 2.5e-83 314.3 762 36.6
Cpa.g.sc66.23 Carica papaya HOM05D004901 ORTHO05D005592 3.2e-83 313.9 554 41.3
Sed0000511 Sechium edule HOM05D004901 ORTHO05D005592 9.4e-83 312.4 788 33.2
Glyma.08G238200 Glycine max HOM05D004901 ORTHO05D005592 1.2e-82 312.0 755 36.4
Aa31LG6G8790 Aethionema arabicum HOM05D004901 ORTHO05D005592 1.6e-82 311.6 767 36.0
HanXRQChr17g0559191 Helianthus annuus HOM05D004901 ORTHO05D005592 3.6e-82 310.5 754 36.7
Peaxi162Scf00391g00532 Petunia axillaris HOM05D004901 ORTHO05D005592 2.3e-81 307.8 627 40.4
Lalb_Chr01g0000031 Lupinus albus HOM05D004901 ORTHO05D005592 6.7e-81 306.2 747 36.1
vmacro00755 Vaccinium macrocarpon HOM05D004901 ORTHO05D005592 8.8e-81 305.8 527 42.3
CiPaw.03G019300 Carya illinoinensis HOM05D004901 ORTHO05D005592 1.7e-79 301.6 646 38.9
Nitab4.5_0003010g0040 Nicotiana tabacum HOM05D004901 ORTHO05D005592 2.2e-79 301.2 625 38.9
TPR.G26106 Trifolium pratense HOM05D004901 ORTHO05D005592 8.2e-79 299.3 753 36.8
Hund16786 Selenicereus undatus HOM05D004901 ORTHO05D005592 5.3e-78 296.6 776 33.9
Solyc11g020770.3 Solanum lycopersicum HOM05D004901 ORTHO05D005592 5.0e-76 290.0 634 38.8
arahy.Tifrunner.gnm1.ann1.CA6GZM Arachis hypogaea HOM05D004901 ORTHO05D005592 1.9e-75 288.1 748 35.7
arahy.Tifrunner.gnm1.ann1.0Z9JWZ Arachis hypogaea HOM05D004901 ORTHO05D005592 3.2e-75 287.3 746 35.1
ClCG11G008660 Citrullus lanatus HOM05D004901 ORTHO05D005592 4.7e-74 283.5 787 34.4
Psat0s1585g0040 Pisum sativum HOM05D004901 ORTHO05D005592 6.1e-74 283.1 775 34.5
Nitab4.5_0000167g0270 Nicotiana tabacum HOM05D004901 ORTHO05D005592 4.4e-72 276.9 705 35.7
Ca_19714_v3 Cicer arietinum L. HOM05D004901 ORTHO05D005592 1.8e-70 271.6 747 34.7
MELO3C008073.2 Cucumis melo HOM05D004901 ORTHO05D005592 1.6e-69 268.5 772 33.2
VMungo1127G1203 Vigna mungo HOM05D004901 ORTHO05D005592 8.5e-68 262.7 741 33.7
Ah.04g162840 Amaranthus hybridus HOM05D004901 ORTHO05D005592 1.9e-67 261.5 788 32.4
CDE04G3479 Ceratophyllum demersum HOM05D004901 ORTHO05D005592 2.7e-66 257.7 841 31.4
EL10Ac1g00109 Beta vulgaris HOM05D004901 ORTHO05D005592 1.2e-64 252.3 778 31.9
Medtr1g103260 Medicago truncatula HOM05D004901 ORTHO05D005592 6.3e-63 246.5 742 33.3
SHI09022 Sapria himalayana HOM05D004901 ORTHO05D005592 6.6e-60 236.5 756 32.8
Zm00001eb201140 Zea mays HOM05D004901 ORTHO05D005592 6.6e-60 236.5 783 30.4
ATR0749G100 Amborella trichopoda HOM05D004901 ORTHO05D005592 2.6e-56 224.6 819 30.6
HPP92_004438 Vanilla planifolia HOM05D004901 ORTHO05D005592 9.8e-56 222.6 817 30.5
AUR62023519 Chenopodium quinoa HOM05D004901 ORTHO05D005592 3.7e-55 220.7 958 27.8
CsaV3_2G033030 Cucumis sativus L. HOM05D004901 ORTHO05D005592 8.3e-55 219.5 586 34.1
Aqoxy4G02416 Aquilegia oxysepala HOM05D004901 ORTHO05D005592 5.0e-44 183.7 229 48.9
Prupe.2G019600 Prunus persica HOM05D004901 ORTHO05D005592 4.3e-43 180.6 469 32.8
Peaxi162Scf00391g00531 Petunia axillaris HOM05D004901 ORTHO05D005592 8.3e-39 166.4 142 61.3
Solyc11g020760.3 Solanum lycopersicum HOM05D004901 ORTHO05D005592 1.9e-38 165.2 141 59.6
Nitab4.5_0003010g0060 Nicotiana tabacum HOM05D004901 ORTHO05D005592 1.5e-35 155.6 141 58.9
vmacro00754 Vaccinium macrocarpon HOM05D004901 ORTHO05D005592 1.4e-33 149.1 143 53.8
SEGI_29563 Sequoiadendron giganteum HOM05D004901 ORTHO05D005592 1.0e-28 132.9 117 57.3
Nitab4.5_0000167g0280 Nicotiana tabacum HOM05D004901 ORTHO05D005592 1.7e-28 132.1 115 59.1
CSS0042276 Camellia sinensis var. sinensis HOM05D004901 ORTHO05D005592 1.4e-25 122.5 186 47.3
Mapoly0001s0472 Marchantia polymorpha HOM05D004901 ORTHO05D005592 2.4e-25 121.7 118 49.2
Aqoxy4G02415 Aquilegia oxysepala HOM05D004901 ORTHO05D005592 7.6e-24 116.7 325 34.2
Hma1.2p1_0503F.1_g168030 Hydrangea macrophylla HOM05D004901 ORTHO05D005592 2.9e-23 114.8 191 45.0
AagrBONN_evm.TU.Sc2ySwM_228.534 Anthoceros agrestis HOM05D004901 ORTHO05D005592 2.4e-22 111.7 119 48.7
unitig_747.g21475 Utricularia gibba HOM05D004901 ORTHO05D005592 2.3e-20 105.1 522 28.7
Pp3c20_9530 Physcomitrium patens HOM05D004901 ORTHO05D005592 2.5e-19 101.7 905 23.9
Prupe.2G019700 Prunus persica HOM05D004901 ORTHO05D005592 7.8e-13 80.1 192 36.5
Psat5g126920 Pisum sativum HOM05D004901 ORTHO05D005592 1.4e-06 59.3 132 43.2


User provided reference genes

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