Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6A637T62 Lonicera japonica HOM05D004511 ORTHO05D005348 7.6e-28 126.3 59 100.0
Lalb_Chr02g0150721 Lupinus albus HOM05D004511 ORTHO05D005348 7.1e-26 119.8 56 98.2
Aa31LG8G11050 Aethionema arabicum HOM05D004511 ORTHO05D005348 1.6e-25 118.6 56 96.4
Carub.0003s2466 Capsella rubella HOM05D004511 ORTHO05D005348 1.6e-25 118.6 56 96.4
Cc03_g06420 Coffea canephora HOM05D004511 ORTHO05D005348 1.6e-25 118.6 56 96.4
Nn1g02989 Nelumbo nucifera HOM05D004511 ORTHO05D005348 1.6e-25 118.6 56 94.6
AL3G39770 Arabidopsis lyrata HOM05D004511 ORTHO05D005348 2.1e-25 118.2 56 94.6
A07p07990 Brassica napus HOM05D004511 ORTHO05D005348 2.1e-25 118.2 56 94.6
BraA07t28586Z Brassica rapa HOM05D004511 ORTHO05D005348 2.1e-25 118.2 56 94.6
Sp3g22130 Schrenkiella parvula HOM05D004511 ORTHO05D005348 2.1e-25 118.2 56 94.6
Ah.01g020260 Amaranthus hybridus HOM05D004511 ORTHO05D005348 2.7e-25 117.9 56 94.6
arahy.Tifrunner.gnm1.ann1.QET6JI Arachis hypogaea HOM05D004511 ORTHO05D005348 2.7e-25 117.9 56 94.6
AUR62011461 Chenopodium quinoa HOM05D004511 ORTHO05D005348 2.7e-25 117.9 56 92.9
AUR62016594 Chenopodium quinoa HOM05D004511 ORTHO05D005348 2.7e-25 117.9 56 92.9
Haze_11474 Corylus avellana HOM05D004511 ORTHO05D005348 2.7e-25 117.9 58 87.9
Thhalv10002376m.g Eutrema salsugineum HOM05D004511 ORTHO05D005348 3.5e-25 117.5 56 92.9
PSO170G1037 Papaver somniferum HOM05D004511 ORTHO05D005348 3.5e-25 117.5 56 92.9
PGR004G0717 Punica granatum HOM05D004511 ORTHO05D005348 3.5e-25 117.5 56 94.6
GSVIVG01027931001 Vitis vinifera HOM05D004511 ORTHO05D005348 3.5e-25 117.5 56 94.6
CSS0045058 Camellia sinensis var. sinensis HOM05D004511 ORTHO05D005348 4.6e-25 117.1 56 94.6
COL.COLO4_15984 Corchorus olitorius HOM05D004511 ORTHO05D005348 4.6e-25 117.1 56 94.6
QL06p021350 Quercus lobata HOM05D004511 ORTHO05D005348 4.6e-25 117.1 56 94.6
THA.LOC104821629 Tarenaya hassleriana HOM05D004511 ORTHO05D005348 4.6e-25 117.1 56 94.6
BcaC06g35683 Brassica carinata HOM05D004511 ORTHO05D005348 6.0e-25 116.7 56 94.6
C07p12050 Brassica napus HOM05D004511 ORTHO05D005348 6.0e-25 116.7 56 94.6
BolC7t41673H Brassica oleracea HOM05D004511 ORTHO05D005348 6.0e-25 116.7 56 94.6
DCAR_027355 Daucus carota HOM05D004511 ORTHO05D005348 6.0e-25 116.7 56 91.1
Os04g0507000 Oryza sativa ssp. japonica HOM05D004511 ORTHO05D005348 6.0e-25 116.7 56 91.1
Potri.010G065000 Populus trichocarpa HOM05D004511 ORTHO05D005348 6.0e-25 116.7 56 92.9
Duzib151G0197 Durio zibethinus HOM05D004511 ORTHO05D005348 7.9e-25 116.3 56 92.9
Gohir.A09G230900 Gossypium hirsutum HOM05D004511 ORTHO05D005348 7.9e-25 116.3 56 92.9
Gorai.006G254800 Gossypium raimondii HOM05D004511 ORTHO05D005348 7.9e-25 116.3 56 92.9
Prupe.1G050200 Prunus persica HOM05D004511 ORTHO05D005348 7.9e-25 116.3 56 92.9
Thecc.04G266800 Theobroma cacao HOM05D004511 ORTHO05D005348 7.9e-25 116.3 56 92.9
TAR365G1143 Trochodendron aralioides HOM05D004511 ORTHO05D005348 7.9e-25 116.3 56 91.1
MSTRG.9851 Avicennia marina HOM05D004511 ORTHO05D005348 1.0e-24 115.9 56 92.9
Eucgr.H02905 Eucalyptus grandis HOM05D004511 ORTHO05D005348 1.0e-24 115.9 56 92.9
FvH4_4g05000 Fragaria vesca HOM05D004511 ORTHO05D005348 1.0e-24 115.9 56 91.1
Nitab4.5_0005154g0040 Nicotiana tabacum HOM05D004511 ORTHO05D005348 1.0e-24 115.9 56 92.9
Oeu061869.1 Olea europaea HOM05D004511 ORTHO05D005348 1.0e-24 115.9 56 92.9
RcHm_v2.0_Chr4g0395811 Rosa chinensis HOM05D004511 ORTHO05D005348 1.0e-24 115.9 56 91.1
Sopen09g033830 Solanum pennellii HOM05D004511 ORTHO05D005348 1.0e-24 115.9 56 92.9
Actinidia27093 Actinidia chinensis HOM05D004511 ORTHO05D005348 1.3e-24 115.5 56 91.1
AT3G24320 Arabidopsis thaliana HOM05D004511 ORTHO05D005348 1.3e-24 115.5 56 91.1
CSS0023992 Camellia sinensis var. sinensis HOM05D004511 ORTHO05D005348 1.3e-24 115.5 56 92.9
Ca_11884_v3 Cicer arietinum L. HOM05D004511 ORTHO05D005348 1.3e-24 115.5 56 89.3
Hund00475 Selenicereus undatus HOM05D004511 ORTHO05D005348 1.3e-24 115.5 56 91.1
Sc11g0002730 Simmondsia chinensis HOM05D004511 ORTHO05D005348 1.3e-24 115.5 56 89.3
SGA_v2.0_scaffold67G22677 Striga asiatica HOM05D004511 ORTHO05D005348 1.3e-24 115.5 56 91.1
TWI73G0808 Tripterygium wilfordii HOM05D004511 ORTHO05D005348 1.3e-24 115.5 56 91.1
Aqoxy5G00136 Aquilegia oxysepala HOM05D004511 ORTHO05D005348 1.8e-24 115.2 56 87.5
arahy.Tifrunner.gnm1.ann1.Z900IQ Arachis hypogaea HOM05D004511 ORTHO05D005348 1.8e-24 115.2 56 91.1
BcaB06g26614 Brassica carinata HOM05D004511 ORTHO05D005348 1.8e-24 115.2 56 92.9
Migut.G00563 Erythranthe guttata HOM05D004511 ORTHO05D005348 1.8e-24 115.2 56 91.1
CARHR100420 Cardamine hirsuta HOM05D004511 ORTHO05D005348 2.3e-24 114.8 56 89.3
CiPaw.01G177000 Carya illinoinensis HOM05D004511 ORTHO05D005348 2.3e-24 114.8 56 94.6
Nitab4.5_0001041g0180 Nicotiana tabacum HOM05D004511 ORTHO05D005348 2.3e-24 114.8 56 91.1
PSO210G5810 Papaver somniferum HOM05D004511 ORTHO05D005348 2.3e-24 114.8 56 91.1
CANSAT78G2334 Cannabis sativa HOM05D004511 ORTHO05D005348 3.0e-24 114.4 56 89.3
Glyma.10G130700 Glycine max HOM05D004511 ORTHO05D005348 3.0e-24 114.4 56 91.1
MD13G1223200 Malus domestica HOM05D004511 ORTHO05D005348 3.0e-24 114.4 56 91.1
Atru.chr4.1900 Acer truncatum HOM05D004511 ORTHO05D005348 3.9e-24 114.0 56 91.1
Ciclev10004190m.g Citrus clementina HOM05D004511 ORTHO05D005348 3.9e-24 114.0 56 91.1
Rhsim04G0171100 Rhododendron simsii HOM05D004511 ORTHO05D005348 3.9e-24 114.0 56 91.1
Solyc09g090870.3 Solanum lycopersicum HOM05D004511 ORTHO05D005348 3.9e-24 114.0 56 91.1
Zm00001eb426210 Zea mays HOM05D004511 ORTHO05D005348 3.9e-24 114.0 56 91.1
Dinv29796 Davidia involucrata HOM05D004511 ORTHO05D005348 5.1e-24 113.6 56 92.9
Lj6g0021678 Lotus japonicus HOM05D004511 ORTHO05D005348 5.1e-24 113.6 56 89.3
Medtr1g045670 Medicago truncatula HOM05D004511 ORTHO05D005348 5.1e-24 113.6 56 89.3
vmacro08561 Vaccinium macrocarpon HOM05D004511 ORTHO05D005348 5.1e-24 113.6 56 89.3
Gohir.D09G232000 Gossypium hirsutum HOM05D004511 ORTHO05D005348 6.7e-24 113.2 56 91.1
ECA248G2418 Erigeron canadensis HOM05D004511 ORTHO05D005348 8.7e-24 112.8 56 87.5
FAN12G0867 Fragaria x ananassa HOM05D004511 ORTHO05D005348 8.7e-24 112.8 56 89.3
HPP92_015182 Vanilla planifolia HOM05D004511 ORTHO05D005348 8.7e-24 112.8 56 89.3
Sed0014740 Sechium edule HOM05D004511 ORTHO05D005348 1.9e-23 111.7 56 87.5
Psat6g108520 Pisum sativum HOM05D004511 ORTHO05D005348 2.5e-23 111.3 55 89.1
ClCG05G003940 Citrullus lanatus HOM05D004511 ORTHO05D005348 4.3e-23 110.5 56 87.5
MELO3C006369.2 Cucumis melo HOM05D004511 ORTHO05D005348 4.3e-23 110.5 56 87.5
CsaV3_3G011610 Cucumis sativus L. HOM05D004511 ORTHO05D005348 4.3e-23 110.5 56 87.5
HanXRQChr06g0182821 Helianthus annuus HOM05D004511 ORTHO05D005348 4.3e-23 110.5 56 87.5
AL2G22890 Arabidopsis lyrata HOM05D004511 ORTHO05D005348 5.7e-23 110.2 67 80.6
Glyma.20G073500 Glycine max HOM05D004511 ORTHO05D005348 9.7e-23 109.4 56 87.5
Ca_07387_v3 Cicer arietinum L. HOM05D004511 ORTHO05D005348 1.3e-22 109.0 56 85.7
Lsat_1_v5_gn_2_41221 Lactuca sativa HOM05D004511 ORTHO05D005348 2.2e-22 108.2 56 82.1
Phvul.007G232900 Phaseolus vulgaris HOM05D004511 ORTHO05D005348 2.8e-22 107.8 56 83.9
VMungo0720G1651 Vigna mungo HOM05D004511 ORTHO05D005348 6.3e-22 106.7 56 82.1
HanXRQChr01g0023051 Helianthus annuus HOM05D004511 ORTHO05D005348 8.2e-22 106.3 56 76.8
ATR0787G210 Amborella trichopoda HOM05D004511 ORTHO05D005348 1.8e-21 105.1 56 78.6
SHI00817 Sapria himalayana HOM05D004511 ORTHO05D005348 2.4e-21 104.8 56 83.9
Ca_26419_v3 Cicer arietinum L. HOM05D004511 ORTHO05D005348 3.1e-21 104.4 56 83.9
Ca_30594_v3 Cicer arietinum L. HOM05D004511 ORTHO05D005348 3.1e-21 104.4 56 83.9
SEGI_11740 Sequoiadendron giganteum HOM05D004511 ORTHO05D005348 6.9e-21 103.2 56 75.0
SEGI_26830 Sequoiadendron giganteum HOM05D004511 ORTHO05D005348 6.9e-21 103.2 56 75.0
Peaxi162Scf00531g00610 Petunia axillaris HOM05D004511 ORTHO05D005348 1.2e-20 102.4 51 90.2
Glyma.10G121560 Glycine max HOM05D004511 ORTHO05D005348 1.5e-20 102.1 56 80.4
Glyma.10G121584 Glycine max HOM05D004511 ORTHO05D005348 1.5e-20 102.1 56 80.4
Glyma.10G121600 Glycine max HOM05D004511 ORTHO05D005348 3.4e-20 100.9 56 80.4
Glyma.10G121578 Glycine max HOM05D004511 ORTHO05D005348 4.5e-20 100.5 56 80.4
unitig_747.g21671 Utricularia gibba HOM05D004511 ORTHO05D005348 7.7e-20 99.8 74 66.2
EL10Ac9g21855 Beta vulgaris HOM05D004511 ORTHO05D005348 1.7e-19 98.6 94 55.3
Mapoly0067s0046 Marchantia polymorpha HOM05D004511 ORTHO05D005348 2.9e-19 97.8 56 66.1
SMO364G0324 Selaginella moellendorffii HOM05D004511 ORTHO05D005348 1.6e-17 92.0 55 69.1
CDE08G1007 Ceratophyllum demersum HOM05D004511 ORTHO05D005348 1.1e-15 85.9 42 85.7
Cpa.g.c32688 Carica papaya HOM05D004511 ORTHO05D005348 9.7e-15 82.8 40 87.5
Pp3c23_17640 Physcomitrium patens HOM05D004511 ORTHO05D005348 2.2e-14 81.6 56 58.9
Pp3c8_22090 Physcomitrium patens HOM05D004511 ORTHO05D005348 4.1e-13 77.4 56 57.1
MCO07G727 Micromonas commoda HOM05D004511 ORTHO05D005348 1.0e-11 72.8 55 61.8
PRCOL_00002937 Prasinoderma coloniale HOM05D004511 ORTHO05D005348 1.0e-11 72.8 51 60.8
TPR.G7054 Trifolium pratense HOM05D004511 ORTHO05D005348 5.5e-10 67.0 33 87.9


User provided reference genes

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