Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5g0026498 Lotus japonicus HOM05D006305 ORTHO05D007984 4.5e-188 661.4 381 100.0
VMungo0720G1654 Vigna mungo HOM05D006305 ORTHO05D007984 5.5e-162 574.7 372 87.6
Glyma.10G156300 Glycine max HOM05D006305 ORTHO05D007984 3.1e-157 558.9 390 77.2
Phvul.007G181700 Phaseolus vulgaris HOM05D006305 ORTHO05D007984 2.6e-156 555.8 373 80.7
Ca_10097_v3 Cicer arietinum L. HOM05D006305 ORTHO05D007984 8.5e-155 550.8 381 76.6
Psat0ss6702g0320 Pisum sativum HOM05D006305 ORTHO05D007984 3.2e-154 548.9 384 78.4
Medtr1g082570 Medicago truncatula HOM05D006305 ORTHO05D007984 2.7e-153 545.8 384 76.6
arahy.Tifrunner.gnm1.ann1.84BFE2 Arachis hypogaea HOM05D006305 ORTHO05D007984 2.3e-152 542.7 388 83.0
arahy.Tifrunner.gnm1.ann1.39Z7HW Arachis hypogaea HOM05D006305 ORTHO05D007984 1.1e-151 540.4 394 82.5
Lalb_Chr02g0148341 Lupinus albus HOM05D006305 ORTHO05D007984 6.3e-150 534.6 375 85.3
RcHm_v2.0_Chr3g0454231 Rosa chinensis HOM05D006305 ORTHO05D007984 5.9e-140 501.5 381 69.8
FAN14G0751 Fragaria x ananassa HOM05D006305 ORTHO05D007984 7.7e-140 501.1 383 70.2
FAN14G5210 Fragaria x ananassa HOM05D006305 ORTHO05D007984 7.7e-140 501.1 383 70.2
FAN05G5097 Fragaria x ananassa HOM05D006305 ORTHO05D007984 1.7e-139 500.0 383 70.0
CANSAT54G0217 Cannabis sativa HOM05D006305 ORTHO05D007984 3.8e-139 498.8 365 72.3
FvH4_6g05460 Fragaria vesca HOM05D006305 ORTHO05D007984 6.5e-139 498.0 383 70.0
QL03p004578 Quercus lobata HOM05D006305 ORTHO05D007984 1.5e-138 496.9 394 71.3
Eucgr.H04470 Eucalyptus grandis HOM05D006305 ORTHO05D007984 8.0e-137 491.1 388 72.9
MD04G1208500 Malus domestica HOM05D006305 ORTHO05D007984 8.0e-137 491.1 386 71.2
Manes.09G164300 Manihot esculenta HOM05D006305 ORTHO05D007984 1.8e-136 490.0 378 71.2
CiPaw.07G015100 Carya illinoinensis HOM05D006305 ORTHO05D007984 2.3e-136 489.6 377 68.7
FAN05G0068 Fragaria x ananassa HOM05D006305 ORTHO05D007984 3.4e-135 485.7 383 68.4
GSVIVG01000016001 Vitis vinifera HOM05D006305 ORTHO05D007984 3.4e-135 485.7 373 73.5
Cc02_g33730 Coffea canephora HOM05D006305 ORTHO05D007984 9.8e-135 484.2 388 69.8
Dinv23970 Davidia involucrata HOM05D006305 ORTHO05D007984 9.8e-135 484.2 373 68.9
Gorai.013G204500 Gossypium raimondii HOM05D006305 ORTHO05D007984 1.7e-134 483.4 371 73.6
CSS0018445 Camellia sinensis var. sinensis HOM05D006305 ORTHO05D007984 3.7e-134 482.3 370 73.0
Gohir.D13G179200 Gossypium hirsutum HOM05D006305 ORTHO05D007984 3.7e-134 482.3 369 74.5
CSS0021232 Camellia sinensis var. sinensis HOM05D006305 ORTHO05D007984 1.1e-133 480.7 374 71.9
Atru.chr2.472 Acer truncatum HOM05D006305 ORTHO05D007984 5.4e-133 478.4 380 67.4
PGR031G3204 Punica granatum HOM05D006305 ORTHO05D007984 2.7e-132 476.1 386 71.8
Gohir.A13G173500 Gossypium hirsutum HOM05D006305 ORTHO05D007984 1.7e-131 473.4 372 74.5
EL10Ac4g09328 Beta vulgaris HOM05D006305 ORTHO05D007984 2.2e-131 473.0 381 65.9
TWI56G0624 Tripterygium wilfordii HOM05D006305 ORTHO05D007984 3.8e-131 472.2 383 68.1
Rhsim05G0143900 Rhododendron simsii HOM05D006305 ORTHO05D007984 1.9e-130 469.9 380 69.7
Hund21683 Selenicereus undatus HOM05D006305 ORTHO05D007984 1.9e-130 469.9 364 77.2
TAR636G3548 Trochodendron aralioides HOM05D006305 ORTHO05D007984 5.5e-130 468.4 376 75.0
Thecc.05G307300 Theobroma cacao HOM05D006305 ORTHO05D007984 2.1e-129 466.5 375 71.5
AL3G15630 Arabidopsis lyrata HOM05D006305 ORTHO05D007984 2.7e-129 466.1 367 72.2
SGA_v2.0_scaffold34G13953 Striga asiatica HOM05D006305 ORTHO05D007984 6.1e-129 464.9 371 67.4
Nitab4.5_0002756g0070 Nicotiana tabacum HOM05D006305 ORTHO05D007984 1.0e-128 464.2 378 68.8
Potri.005G036700 Populus trichocarpa HOM05D006305 ORTHO05D007984 1.4e-128 463.8 391 69.1
BcaC05g30009 Brassica carinata HOM05D006305 ORTHO05D007984 1.8e-128 463.4 377 64.7
C05p61980 Brassica napus HOM05D006305 ORTHO05D007984 1.8e-128 463.4 377 64.7
ClCG08G002270 Citrullus lanatus HOM05D006305 ORTHO05D007984 2.3e-128 463.0 381 65.9
BolC5t34858H Brassica oleracea HOM05D006305 ORTHO05D007984 3.0e-128 462.6 377 64.5
Carub.0003s0446 Capsella rubella HOM05D006305 ORTHO05D007984 3.0e-128 462.6 365 68.8
Lj9A683T26 Lonicera japonica HOM05D006305 ORTHO05D007984 3.0e-128 462.6 378 66.1
Sabra05G0037100 Salix brachista HOM05D006305 ORTHO05D007984 3.0e-128 462.6 390 71.0
BcaC05g30168 Brassica carinata HOM05D006305 ORTHO05D007984 2.0e-127 459.9 390 67.4
A05p42370 Brassica napus HOM05D006305 ORTHO05D007984 3.4e-127 459.1 382 64.7
BraA05t23013Z Brassica rapa HOM05D006305 ORTHO05D007984 3.4e-127 459.1 382 64.7
PGSC0003DMG400024658 Solanum tuberosum HOM05D006305 ORTHO05D007984 7.5e-127 458.0 370 68.4
Thhalv10020823m.g Eutrema salsugineum HOM05D006305 ORTHO05D007984 1.3e-126 457.2 371 64.7
CAN.G479.41 Capsicum annuum HOM05D006305 ORTHO05D007984 1.7e-126 456.8 376 63.6
Lsat_1_v5_gn_2_67520 Lactuca sativa HOM05D006305 ORTHO05D007984 2.8e-126 456.1 357 69.2
Sp3g04060 Schrenkiella parvula HOM05D006305 ORTHO05D007984 3.7e-126 455.7 379 63.3
Ah.06g189130 Amaranthus hybridus HOM05D006305 ORTHO05D007984 6.3e-126 454.9 386 65.5
DCAR_029432 Daucus carota HOM05D006305 ORTHO05D007984 2.4e-125 453.0 373 71.8
Solyc03g115580.4 Solanum lycopersicum HOM05D006305 ORTHO05D007984 1.2e-124 450.7 371 66.3
Aa31LG5G15590 Aethionema arabicum HOM05D006305 ORTHO05D007984 1.6e-124 450.3 398 66.1
Sopen03g034570 Solanum pennellii HOM05D006305 ORTHO05D007984 4.5e-124 448.7 371 70.9
Peaxi162Scf00274g00026 Petunia axillaris HOM05D006305 ORTHO05D007984 1.7e-123 446.8 412 60.2
HanXRQChr15g0472081 Helianthus annuus HOM05D006305 ORTHO05D007984 2.9e-123 446.0 368 70.1
Hma1.2p1_0666F.1_g199520 Hydrangea macrophylla HOM05D006305 ORTHO05D007984 1.5e-122 443.7 301 78.4
ECA238G3439 Erigeron canadensis HOM05D006305 ORTHO05D007984 4.2e-122 442.2 369 74.0
MSTRG.306 Avicennia marina HOM05D006305 ORTHO05D007984 7.2e-122 441.4 371 65.0
FAN02G0061 Fragaria x ananassa HOM05D006305 ORTHO05D007984 7.2e-122 441.4 382 64.4
SalBow6G6985 Salvia bowleyana HOM05D006305 ORTHO05D007984 2.1e-121 439.9 369 63.7
CDE11G1040 Ceratophyllum demersum HOM05D006305 ORTHO05D007984 4.0e-120 435.6 368 63.0
Ciclev10001229m.g Citrus clementina HOM05D006305 ORTHO05D007984 5.2e-120 435.3 300 77.0
Migut.F01514 Erythranthe guttata HOM05D006305 ORTHO05D007984 6.8e-120 434.9 364 63.7
Aqoxy5G04250 Aquilegia oxysepala HOM05D006305 ORTHO05D007984 1.2e-119 434.1 387 60.5
Prupe.6G329400 Prunus persica HOM05D006305 ORTHO05D007984 2.9e-118 429.5 287 77.4
BcaC05g30019 Brassica carinata HOM05D006305 ORTHO05D007984 4.9e-118 428.7 377 61.3
THA.LOC104820089 Tarenaya hassleriana HOM05D006305 ORTHO05D007984 1.0e-115 421.0 385 60.5
AUR62000888 Chenopodium quinoa HOM05D006305 ORTHO05D007984 6.6e-115 418.3 294 72.8
AUR62005086 Chenopodium quinoa HOM05D006305 ORTHO05D007984 3.3e-114 416.0 294 72.4
Cfa006552 Carpinus fangiana HOM05D006305 ORTHO05D007984 7.3e-114 414.8 292 78.4
HPP92_015091 Vanilla planifolia HOM05D006305 ORTHO05D007984 9.5e-114 414.5 364 62.4
vmacro19639 Vaccinium macrocarpon HOM05D006305 ORTHO05D007984 1.6e-113 413.7 283 74.9
Haze_04230 Corylus avellana HOM05D006305 ORTHO05D007984 1.3e-110 404.1 414 61.6
unitig_746.g26625 Utricularia gibba HOM05D006305 ORTHO05D007984 1.7e-110 403.7 308 66.6
COL.COLO4_19840 Corchorus olitorius HOM05D006305 ORTHO05D007984 1.1e-109 401.0 221 87.8
Nn3g18889 Nelumbo nucifera HOM05D006305 ORTHO05D007984 1.1e-109 401.0 278 81.7
TPR.G22794 Trifolium pratense HOM05D006305 ORTHO05D007984 9.2e-109 397.9 245 83.7
ATR0620G066 Amborella trichopoda HOM05D006305 ORTHO05D007984 1.2e-108 397.5 388 58.8
MELO3C025022.2 Cucumis melo HOM05D006305 ORTHO05D007984 3.3e-106 389.4 282 72.0
MBI04_g21739_MAGBIO Magnolia biondii HOM05D006305 ORTHO05D007984 4.3e-106 389.0 288 70.5
PSO782G4398 Papaver somniferum HOM05D006305 ORTHO05D007984 9.5e-106 387.9 381 59.3
Zm00001eb043410 Zea mays HOM05D006305 ORTHO05D007984 1.6e-105 387.1 389 57.1
CsaV3_6G002610 Cucumis sativus L. HOM05D006305 ORTHO05D007984 1.4e-104 384.0 285 69.8
PSO063G7033 Papaver somniferum HOM05D006305 ORTHO05D007984 3.1e-104 382.9 382 61.0
Os10g0518900 Oryza sativa ssp. japonica HOM05D006305 ORTHO05D007984 7.5e-103 378.3 293 66.2
Sed0018566 Sechium edule HOM05D006305 ORTHO05D007984 7.5e-103 378.3 279 69.5
AT3G05210 Arabidopsis thaliana HOM05D006305 ORTHO05D007984 2.4e-93 346.7 258 68.2
Ciclev10002028m.g Citrus clementina HOM05D006305 ORTHO05D007984 3.2e-93 346.3 254 70.9
Mapoly0128s0010 Marchantia polymorpha HOM05D006305 ORTHO05D007984 7.1e-93 345.1 356 59.6
Pp3c6_29610 Physcomitrium patens HOM05D006305 ORTHO05D007984 2.1e-92 343.6 402 47.8
SMO146G0211 Selaginella moellendorffii HOM05D006305 ORTHO05D007984 3.0e-91 339.7 202 79.2
CBR_g4857 Chara braunii HOM05D006305 ORTHO05D007984 6.8e-88 328.6 274 59.9
Duzib106G1918 Durio zibethinus HOM05D006305 ORTHO05D007984 6.4e-86 322.0 373 57.6
Nitab4.5_0001211g0080 Nicotiana tabacum HOM05D006305 ORTHO05D007984 8.4e-86 321.6 379 55.4
Cpa.g.sc1183.2 Carica papaya HOM05D006305 ORTHO05D007984 3.5e-84 316.2 388 47.7
Ciclev10003828m.g Citrus clementina HOM05D006305 ORTHO05D007984 1.9e-82 310.5 318 55.3
Sc16g0008400 Simmondsia chinensis HOM05D006305 ORTHO05D007984 7.3e-82 308.5 230 70.4
Hma1.2p1_0666F.1_g199530 Hydrangea macrophylla HOM05D006305 ORTHO05D007984 4.4e-79 299.3 205 75.1
CARHR079550 Cardamine hirsuta HOM05D006305 ORTHO05D007984 3.2e-69 266.5 140 87.1
MBI04_g44620_MAGBIO Magnolia biondii HOM05D006305 ORTHO05D007984 1.6e-68 264.2 146 87.0
AagrBONN_evm.TU.Sc2ySwM_369.531 Anthoceros agrestis HOM05D006305 ORTHO05D007984 1.0e-62 245.0 265 48.7
Cre03.g196651 Chlamydomonas reinhardtii HOM05D006305 ORTHO05D007984 2.1e-60 237.3 217 53.5
Ciclev10003460m.g Citrus clementina HOM05D006305 ORTHO05D007984 4.6e-60 236.1 267 52.8
Ciclev10003373m.g Citrus clementina HOM05D006305 ORTHO05D007984 1.3e-59 234.6 287 50.5
Cfa026476 Carpinus fangiana HOM05D006305 ORTHO05D007984 2.5e-42 177.2 295 35.6
PRCOL_00003423 Prasinoderma coloniale HOM05D006305 ORTHO05D007984 9.7e-42 175.3 181 46.4
TPR.G7405 Trifolium pratense HOM05D006305 ORTHO05D007984 3.9e-35 153.3 140 67.9
MCO01G606 Micromonas commoda HOM05D006305 ORTHO05D007984 2.6e-31 140.6 194 37.6
Glyma.20G232002 Glycine max HOM05D006305 ORTHO05D007984 5.0e-30 136.3 79 87.3
SalBow6G3462 Salvia bowleyana HOM05D006305 ORTHO05D007984 2.3e-27 127.5 132 51.5
Cpa.g.sc48.16 Carica papaya HOM05D006305 ORTHO05D007984 1.6e-12 78.2 100 45.0
Pp3c16_18520 Physcomitrium patens HOM05D006305 ORTHO05D007984 4.0e-11 73.6 43 69.8
MELO3C033326.2 Cucumis melo HOM05D006305 ORTHO05D168382 9.2e-08 62.4 34 79.4
MBI04_g33407_MAGBIO Magnolia biondii HOM05D006305 ORTHO05D007984 2.7e-07 60.8 138 40.6
FAN21G1146 Fragaria x ananassa HOM05D006305 ORTHO05D208540 8.6e-06 55.8 37 67.6


User provided reference genes

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