Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5g0017333 Lotus japonicus HOM05D006635 ORTHO05D008047 9.2e-142 506.9 261 100.0
arahy.Tifrunner.gnm1.ann1.20YP49 Arachis hypogaea HOM05D006635 ORTHO05D008047 1.5e-104 383.3 264 78.0
arahy.Tifrunner.gnm1.ann1.P8HXAC Arachis hypogaea HOM05D006635 ORTHO05D008047 9.9e-104 380.6 264 77.7
Ca_09839_v3 Cicer arietinum L. HOM05D006635 ORTHO05D008047 7.1e-102 374.4 256 77.3
Psat4g107880 Pisum sativum HOM05D006635 ORTHO05D008047 2.1e-101 372.9 256 77.0
Lalb_Chr02g0150381 Lupinus albus HOM05D006635 ORTHO05D008047 5.1e-100 368.2 263 76.0
Medtr1g075330 Medicago truncatula HOM05D006635 ORTHO05D008047 6.7e-100 367.9 261 75.9
Glyma.10G184800 Glycine max HOM05D006635 ORTHO05D008047 7.6e-96 354.4 255 73.3
Glyma.20G205600 Glycine max HOM05D006635 ORTHO05D008047 1.9e-94 349.7 254 72.8
Phvul.007G125600 Phaseolus vulgaris HOM05D006635 ORTHO05D008047 7.1e-94 347.8 259 71.0
Haze_11307 Corylus avellana HOM05D006635 ORTHO05D008047 1.1e-89 334.0 258 68.6
VMungo0720G1578 Vigna mungo HOM05D006635 ORTHO05D008047 1.8e-89 333.2 261 69.0
Haze_11310 Corylus avellana HOM05D006635 ORTHO05D008047 2.4e-89 332.8 258 68.2
Gohir.D10G153800 Gossypium hirsutum HOM05D006635 ORTHO05D008047 9.0e-89 330.9 255 68.2
Gorai.011G171700 Gossypium raimondii HOM05D006635 ORTHO05D008047 9.0e-89 330.9 255 68.2
GSVIVG01018125001 Vitis vinifera HOM05D006635 ORTHO05D008047 2.0e-88 329.7 255 66.3
CiPaw.01G189900 Carya illinoinensis HOM05D006635 ORTHO05D008047 1.0e-87 327.4 257 68.9
Gohir.A10G113600 Gossypium hirsutum HOM05D006635 ORTHO05D008047 2.2e-87 326.2 255 67.5
Ciclev10005690m.g Citrus clementina HOM05D006635 ORTHO05D008047 5.5e-86 321.6 256 68.0
Thecc.04G246700 Theobroma cacao HOM05D006635 ORTHO05D008047 9.3e-86 320.9 256 66.8
Cfa008372 Carpinus fangiana HOM05D003636 ORTHO05D005160 1.2e-85 320.5 250 67.2
Manes.15G037200 Manihot esculenta HOM05D006635 ORTHO05D008047 1.2e-85 320.5 253 66.4
Ciclev10005689m.g Citrus clementina HOM05D006635 ORTHO05D008047 2.1e-85 319.7 253 67.6
Prupe.1G031500 Prunus persica HOM05D006635 ORTHO05D008047 7.9e-85 317.8 251 65.7
CANSAT78G1035 Cannabis sativa HOM05D006635 ORTHO05D008047 1.3e-84 317.0 258 67.4
CSS0008878 Camellia sinensis var. sinensis HOM05D006635 ORTHO05D008047 2.3e-84 316.2 262 64.9
Hma1.2p1_0650F.1_g195460 Hydrangea macrophylla HOM05D006635 ORTHO05D008047 1.1e-83 313.9 242 67.4
Atru.chr4.2211 Acer truncatum HOM05D006635 ORTHO05D008047 1.5e-83 313.5 254 63.0
Cc03_g04920 Coffea canephora HOM05D006635 ORTHO05D008047 1.5e-83 313.5 266 64.3
Sc19g0003750 Simmondsia chinensis HOM05D006635 ORTHO05D008047 1.6e-82 310.1 261 62.1
Sopen06g018890 Solanum pennellii HOM05D006635 ORTHO05D008047 1.6e-82 310.1 252 65.9
TWI53G1330 Tripterygium wilfordii HOM05D006635 ORTHO05D008047 2.8e-82 309.3 256 64.1
TWI53G1448 Tripterygium wilfordii HOM05D006635 ORTHO05D008047 2.8e-82 309.3 256 64.1
PGSC0003DMG400016282 Solanum tuberosum HOM05D006635 ORTHO05D008047 3.7e-82 308.9 239 67.8
Solyc06g053770.4 Solanum lycopersicum HOM05D006635 ORTHO05D008047 6.3e-82 308.1 252 65.9
RcHm_v2.0_Chr1g0323991 Rosa chinensis HOM05D006635 ORTHO05D008047 8.2e-82 307.8 250 65.2
COL.COLO4_15799 Corchorus olitorius HOM05D006635 ORTHO05D008047 1.8e-81 306.6 237 66.7
Nitab4.5_0000302g0050 Nicotiana tabacum HOM05D006635 ORTHO05D008047 1.8e-81 306.6 262 63.4
Migut.G00439 Erythranthe guttata HOM05D006635 ORTHO05D008047 3.1e-81 305.8 259 64.5
Eucgr.H03153 Eucalyptus grandis HOM05D006635 ORTHO05D008047 3.1e-81 305.8 261 64.0
Sc19g0005210 Simmondsia chinensis HOM05D006635 ORTHO05D008047 4.1e-81 305.4 261 61.3
Actinidia08441 Actinidia chinensis HOM05D006635 ORTHO05D008047 6.9e-81 304.7 253 64.0
Ciclev10007171m.g Citrus clementina HOM05D006635 ORTHO05D008047 1.2e-80 303.9 243 67.9
MD13G1208000 Malus domestica HOM05D006635 ORTHO05D008047 1.2e-80 303.9 256 64.1
Aqoxy5G00314 Aquilegia oxysepala HOM05D006635 ORTHO05D008047 1.5e-80 303.5 258 62.0
FvH4_2g07190 Fragaria vesca HOM05D006635 ORTHO05D008047 2.0e-80 303.1 250 64.4
FAN24G3344 Fragaria x ananassa HOM05D006635 ORTHO05D008047 3.4e-80 302.4 250 64.4
Nn1g02620 Nelumbo nucifera HOM05D006635 ORTHO05D008047 1.7e-79 300.1 283 58.3
Potri.010G075900 Populus trichocarpa HOM05D006635 ORTHO05D008047 2.2e-79 299.7 244 65.2
DCAR_027282 Daucus carota HOM05D006635 ORTHO05D008047 2.9e-79 299.3 247 62.8
Cpa.g.sc58.53 Carica papaya HOM05D006635 ORTHO05D008047 1.1e-78 297.4 221 69.7
PSO210G4915 Papaver somniferum HOM05D006635 ORTHO05D008047 1.9e-78 296.6 261 59.8
FAN20G2319 Fragaria x ananassa HOM05D006635 ORTHO05D008047 2.5e-78 296.2 250 62.8
PSO832G2723 Papaver somniferum HOM05D006635 ORTHO05D008047 5.5e-78 295.0 261 58.6
CsaV3_7G006710 Cucumis sativus L. HOM05D006635 ORTHO05D008047 1.6e-77 293.5 229 66.8
CAN.G118.6 Capsicum annuum HOM05D006635 ORTHO05D008047 2.1e-77 293.1 256 60.9
THA.LOC104808600 Tarenaya hassleriana HOM05D006635 ORTHO05D008047 6.1e-77 291.6 251 62.5
Dinv29905 Davidia involucrata HOM05D006635 ORTHO05D008047 7.9e-77 291.2 259 61.4
HanXRQChr13g0424511 Helianthus annuus HOM05D006635 ORTHO05D008047 1.8e-76 290.0 246 63.0
Nitab4.5_0008721g0010 Nicotiana tabacum HOM05D006635 ORTHO05D008047 1.8e-76 290.0 204 69.6
MELO3C018624.2 Cucumis melo HOM05D006635 ORTHO05D008047 5.1e-76 288.5 235 65.1
FAN27G3431 Fragaria x ananassa HOM05D006635 ORTHO05D008047 5.1e-76 288.5 279 58.4
ECA240G1129 Erigeron canadensis HOM05D000856 ORTHO05D002253 6.7e-76 288.1 256 61.3
Sed0017322 Sechium edule HOM05D006635 ORTHO05D008047 6.7e-76 288.1 225 66.2
MSTRG.4101 Avicennia marina HOM05D006635 ORTHO05D008047 1.5e-75 287.0 212 66.5
ClCG09G015590 Citrullus lanatus HOM05D006635 ORTHO05D008047 7.4e-75 284.6 245 62.9
Lj6A657T45 Lonicera japonica HOM05D006635 ORTHO05D008047 3.7e-74 282.3 256 60.5
AUR62002251 Chenopodium quinoa HOM05D006635 ORTHO05D008047 1.4e-73 280.4 239 59.4
Duzib151G0047 Durio zibethinus HOM05D006635 ORTHO05D008047 9.1e-73 277.7 250 62.4
QL06p015844 Quercus lobata HOM05D006635 ORTHO05D008047 1.5e-72 276.9 350 47.7
Oeu058885.1 Olea europaea HOM05D006635 ORTHO05D008047 2.0e-72 276.6 274 55.1
vmacro15410 Vaccinium macrocarpon HOM05D006635 ORTHO05D008047 3.4e-72 275.8 308 52.6
HPP92_023529 Vanilla planifolia HOM05D006635 ORTHO05D008047 4.5e-72 275.4 257 56.4
PGR004G0241 Punica granatum HOM05D006635 ORTHO05D008047 7.7e-72 274.6 258 58.1
Hund11856 Selenicereus undatus HOM05D006635 ORTHO05D008047 1.7e-71 273.5 253 58.9
Carub.0003s2327 Capsella rubella HOM05D006635 ORTHO05D008047 1.9e-70 270.0 253 57.7
CDE04G0173 Ceratophyllum demersum HOM05D006635 ORTHO05D008047 1.9e-70 270.0 242 59.9
Sp3g20780 Schrenkiella parvula HOM05D006635 ORTHO05D008047 4.2e-70 268.9 248 58.1
AL3G37550 Arabidopsis lyrata HOM05D006635 ORTHO05D008047 1.6e-69 266.9 257 58.4
Ah.13g066120 Amaranthus hybridus HOM05D006635 ORTHO05D008047 3.6e-69 265.8 229 59.8
CARHR099010 Cardamine hirsuta HOM05D006635 ORTHO05D008047 1.0e-68 264.2 261 58.2
AT3G23100 Arabidopsis thaliana HOM05D006635 ORTHO05D008047 7.4e-67 258.1 257 56.8
BcaB04g20471 Brassica carinata HOM05D006635 ORTHO05D008047 2.8e-66 256.1 194 61.3
Peaxi162Scf00325g00713 Petunia axillaris HOM05D006635 ORTHO05D008047 4.1e-65 252.3 248 58.5
ATR0824G049 Amborella trichopoda HOM05D006635 ORTHO05D008047 7.0e-65 251.5 227 55.5
CSS0031458 Camellia sinensis var. sinensis HOM05D006635 ORTHO05D008047 1.0e-63 247.7 288 52.1
EL10Ac3g05891 Beta vulgaris HOM05D006635 ORTHO05D008047 2.2e-63 246.5 260 53.5
BcaC09g49245 Brassica carinata HOM05D006635 ORTHO05D008047 2.2e-63 246.5 257 53.3
Os03g0740800 Oryza sativa ssp. japonica HOM05D006635 ORTHO05D008047 3.8e-63 245.7 266 53.8
A01p31980 Brassica napus HOM05D006635 ORTHO05D008047 2.7e-61 239.6 206 58.3
BraA01t03324Z Brassica rapa HOM05D006635 ORTHO05D008047 2.7e-61 239.6 206 58.3
Zm00001eb056730 Zea mays HOM05D006635 ORTHO05D008047 3.0e-60 236.1 253 50.2
Aa31LG8G9580 Aethionema arabicum HOM05D006635 ORTHO05D008047 2.2e-58 229.9 282 49.6
BolC1t04048H Brassica oleracea HOM05D006635 ORTHO05D008047 4.1e-57 225.7 176 60.2
Lsat_1_v5_gn_3_122920 Lactuca sativa HOM05D006635 ORTHO05D008047 5.3e-57 225.3 217 58.1
Sabra10G0032800 Salix brachista HOM05D006635 ORTHO05D008047 1.7e-55 220.3 437 36.2
Thhalv10022194m.g Eutrema salsugineum HOM05D006635 ORTHO05D008047 6.1e-53 211.8 254 49.2
MBI19_g38372_MAGBIO Magnolia biondii HOM05D006635 ORTHO05D008047 1.8e-52 210.3 264 49.2
C01p40990 Brassica napus HOM05D006635 ORTHO05D008047 3.0e-44 183.0 135 60.7
PGR004G0922 Punica granatum HOM05D006635 ORTHO05D008047 6.3e-42 175.3 158 54.4
PGR102G1543 Punica granatum HOM05D006635 ORTHO05D008047 6.6e-39 165.2 259 43.6
TPR.G27195 Trifolium pratense HOM05D006635 ORTHO05D008047 6.6e-39 165.2 95 81.1
Mapoly0014s0074 Marchantia polymorpha HOM05D006635 ORTHO05D008047 5.6e-38 162.2 222 40.1
AUR62015462 Chenopodium quinoa HOM05D006635 ORTHO05D008047 3.5e-32 142.9 156 55.1
AagrBONN_evm.TU.Sc2ySwM_228.5661 Anthoceros agrestis HOM05D006635 ORTHO05D008047 7.8e-32 141.7 228 36.8
TAR636G2119 Trochodendron aralioides HOM05D006635 ORTHO05D008047 2.5e-30 136.7 97 61.9
PGR083G1020 Punica granatum HOM05D006635 ORTHO05D008047 1.6e-29 134.0 259 39.4
Ciclev10029925m.g Citrus clementina HOM05D006635 ORTHO05D008047 7.5e-27 125.2 132 50.0
TAR636G0517 Trochodendron aralioides HOM05D006635 ORTHO05D008047 4.6e-24 115.9 121 60.3
Pp3c14_21160 Physcomitrium patens HOM05D006635 ORTHO05D008047 4.3e-22 109.4 228 32.5
Pp3c1_38430 Physcomitrium patens HOM05D006635 ORTHO05D008047 1.8e-20 104.0 258 31.8
SEGI_11171 Sequoiadendron giganteum HOM05D006635 ORTHO05D008047 3.7e-18 96.3 95 46.3
MBI19_g44428_MAGBIO Magnolia biondii HOM05D006635 ORTHO05D008047 2.7e-16 90.1 131 42.0
AT1G61410 Arabidopsis thaliana HOM05D006635 ORTHO05D008047 2.3e-15 87.0 130 51.5
CBR_g33918 Chara braunii HOM05D006635 ORTHO05D008047 5.1e-15 85.9 180 37.2
Oeu058884.1 Olea europaea HOM05D001680 ORTHO05D001596 7.3e-14 82.0 105 48.6
SEGI_02340 Sequoiadendron giganteum HOM05D006635 ORTHO05D008047 8.9e-12 75.1 84 58.3
Thhalv10021924m.g Eutrema salsugineum HOM05D006635 ORTHO05D008047 9.9e-11 71.6 84 54.8
C01p40960 Brassica napus HOM05D006635 ORTHO05D008047 1.1e-09 68.2 95 47.4
Pp3c10_9830 Physcomitrium patens HOM05D000160 ORTHO05D000496 1.1e-09 68.2 155 28.4
C01p40970 Brassica napus HOM05D006635 ORTHO05D008047 4.6e-08 62.8 53 49.1
unitig_747.g21677 Utricularia gibba HOM05D006635 ORTHO05D008047 9.6e-06 55.1 46 52.2


User provided reference genes

Program Settings