Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj5C68G25 Lonicera japonica HOM05D005526 ORTHO05D006802 1.3e-199 699.5 361 100.0
Dinv38097 Davidia involucrata HOM05D005526 ORTHO05D006802 8.5e-162 573.9 361 81.4
Actinidia08810 Actinidia chinensis HOM05D005526 ORTHO05D006802 1.4e-153 546.6 361 78.7
GSVIVG01017251001 Vitis vinifera HOM05D005526 ORTHO05D006802 3.2e-153 545.4 361 77.3
CSS0037293 Camellia sinensis var. sinensis HOM05D005526 ORTHO05D006802 1.2e-152 543.5 361 78.4
TAR383G0281 Trochodendron aralioides HOM05D005526 ORTHO05D006802 4.7e-152 541.6 361 76.7
CSS0003126 Camellia sinensis var. sinensis HOM05D005526 ORTHO05D006802 2.9e-146 522.3 365 76.4
Cfa002011 Carpinus fangiana HOM05D005526 ORTHO05D006802 5.5e-145 518.1 360 74.2
Thecc.06G073100 Theobroma cacao HOM05D005526 ORTHO05D006802 7.2e-145 517.7 361 74.2
Duzib235G1092 Durio zibethinus HOM05D005526 ORTHO05D006802 1.0e-143 513.8 361 73.4
TWI18G0833 Tripterygium wilfordii HOM05D005526 ORTHO05D006802 5.2e-143 511.5 358 73.5
Rhsim12G0193000 Rhododendron simsii HOM05D005526 ORTHO05D006802 6.7e-143 511.1 441 64.6
TWI75G1755 Tripterygium wilfordii HOM05D005526 ORTHO05D006802 1.1e-142 510.4 358 74.3
vmacro16915 Vaccinium macrocarpon HOM05D005526 ORTHO05D006802 4.4e-142 508.4 457 62.4
HanXRQChr10g0303071 Helianthus annuus HOM05D005526 ORTHO05D006802 5.7e-142 508.1 361 75.6
Nn2g11952 Nelumbo nucifera HOM05D005526 ORTHO05D006802 5.7e-142 508.1 361 73.7
Atru.chr1.3093 Acer truncatum HOM05D005526 ORTHO05D006802 4.8e-141 505.0 360 73.3
Gohir.D06G117200 Gossypium hirsutum HOM05D005526 ORTHO05D006802 1.2e-139 500.4 361 72.0
RcHm_v2.0_Chr2g0136621 Rosa chinensis HOM05D005526 ORTHO05D006802 1.6e-139 500.0 360 72.5
ECA234G2940 Erigeron canadensis HOM05D005526 ORTHO05D006802 2.7e-139 499.2 361 73.4
Gorai.010G134800 Gossypium raimondii HOM05D005526 ORTHO05D006802 3.5e-139 498.8 361 71.7
Manes.04G116500 Manihot esculenta HOM05D005526 ORTHO05D006802 3.5e-139 498.8 361 73.1
Gohir.A06G112600 Gossypium hirsutum HOM05D005526 ORTHO05D006802 2.2e-138 496.1 361 71.7
MD09G1221000 Malus domestica HOM05D005526 ORTHO05D006802 5.0e-138 495.0 361 72.9
FvH4_6g30340 Fragaria vesca HOM05D005526 ORTHO05D006802 3.2e-137 492.3 360 71.7
Glyma.15G010400 Glycine max HOM05D005526 ORTHO05D006802 4.2e-137 491.9 359 71.6
FAN02G2127 Fragaria x ananassa HOM05D005526 ORTHO05D006802 5.5e-137 491.5 360 71.9
Lalb_Chr14g0373681 Lupinus albus HOM05D005526 ORTHO05D006802 9.4e-137 490.7 360 72.8
Ciclev10025661m.g Citrus clementina HOM05D005526 ORTHO05D006802 3.6e-136 488.8 359 71.3
COL.COLO4_12896 Corchorus olitorius HOM05D005526 ORTHO05D006802 1.8e-135 486.5 365 70.4
Glyma.13G363400 Glycine max HOM05D005526 ORTHO05D006802 3.0e-135 485.7 359 71.0
CiPaw.01G244400 Carya illinoinensis HOM05D005526 ORTHO05D006802 8.8e-135 484.2 361 70.1
Prupe.3G079900 Prunus persica HOM05D005526 ORTHO05D006802 2.0e-134 483.0 373 70.0
DCAR_025483 Daucus carota HOM05D005526 ORTHO05D006802 4.4e-134 481.9 360 70.8
Cpa.g.sc336.8 Carica papaya HOM05D005526 ORTHO05D006802 1.3e-133 480.3 315 79.0
Potri.001G172800 Populus trichocarpa HOM05D005526 ORTHO05D006802 9.1e-132 474.2 363 70.2
Lj3g0017842 Lotus japonicus HOM05D005526 ORTHO05D006802 2.0e-131 473.0 359 69.6
CAN.G395.46 Capsicum annuum HOM05D005526 ORTHO05D006802 3.5e-131 472.2 362 71.3
MBI01_g11875_MAGBIO Magnolia biondii HOM05D005526 ORTHO05D006802 7.7e-131 471.1 362 69.3
Eucgr.J03045 Eucalyptus grandis HOM05D005526 ORTHO05D006802 1.3e-130 470.3 359 69.1
arahy.Tifrunner.gnm1.ann1.FYL3MV Arachis hypogaea HOM05D005526 ORTHO05D006802 1.7e-130 469.9 359 68.2
Cc04_g04020 Coffea canephora HOM05D005526 ORTHO05D006802 6.5e-130 468.0 362 69.9
MD17G1204400 Malus domestica HOM05D005526 ORTHO05D006802 7.2e-129 464.5 434 61.1
Medtr2g103110 Medicago truncatula HOM05D005526 ORTHO05D006802 1.6e-128 463.4 365 68.8
Solyc06g067990.3 Solanum lycopersicum HOM05D005526 ORTHO05D006802 2.1e-128 463.0 363 70.5
Sopen06g025270 Solanum pennellii HOM05D005526 ORTHO05D006802 2.1e-128 463.0 363 70.5
QL05p027824 Quercus lobata HOM05D005526 ORTHO05D006802 2.7e-128 462.6 415 61.4
Aqoxy7G02084 Aquilegia oxysepala HOM05D005526 ORTHO05D006802 4.7e-128 461.8 361 70.4
Ca_01085_v3 Cicer arietinum L. HOM05D005526 ORTHO05D006802 4.7e-128 461.8 360 68.3
MELO3C017901.2 Cucumis melo HOM05D005526 ORTHO05D006802 7.5e-126 454.5 359 67.7
Psat5g300440 Pisum sativum HOM05D005526 ORTHO05D006802 1.3e-125 453.8 359 67.1
CsaV3_4G001390 Cucumis sativus L. HOM05D005526 ORTHO05D006802 1.7e-125 453.4 359 67.7
FAN09G0405 Fragaria x ananassa HOM05D005526 ORTHO05D006802 1.7e-125 453.4 360 68.9
Dinv30571 Davidia involucrata HOM05D005526 ORTHO05D006802 2.8e-125 452.6 280 81.4
PSO170G3249 Papaver somniferum HOM05D005526 ORTHO05D006802 2.8e-125 452.6 359 66.3
Sed0002477 Sechium edule HOM05D005526 ORTHO05D006802 2.7e-123 446.0 359 66.3
TPR.G37284 Trifolium pratense HOM05D005526 ORTHO05D006802 3.5e-123 445.7 365 66.6
CANSAT56G0953 Cannabis sativa HOM05D005526 ORTHO05D006802 1.3e-122 443.7 360 69.7
SalBow2G2365 Salvia bowleyana HOM05D005526 ORTHO05D006802 1.7e-122 443.4 360 65.0
Oeu063802.2 Olea europaea HOM05D005526 ORTHO05D006802 2.9e-122 442.6 358 69.0
Phvul.005G174900 Phaseolus vulgaris HOM05D005526 ORTHO05D006802 2.9e-122 442.6 360 67.2
MSTRG.9436 Avicennia marina HOM05D005526 ORTHO05D006802 1.2e-120 437.2 361 64.3
Migut.D01055 Erythranthe guttata HOM05D005526 ORTHO05D006802 1.2e-120 437.2 362 66.0
Hund06580 Selenicereus undatus HOM05D005526 ORTHO05D006802 1.4e-119 433.7 359 65.2
THA.LOC104812497 Tarenaya hassleriana HOM05D005526 ORTHO05D006802 4.0e-119 432.2 363 66.1
VMungo1080G0636 Vigna mungo HOM05D005526 ORTHO05D006802 5.4e-116 421.8 354 63.6
Lsat_1_v5_gn_5_132520 Lactuca sativa HOM05D005526 ORTHO05D006802 2.0e-115 419.9 358 66.5
AUR62016379 Chenopodium quinoa HOM05D005526 ORTHO05D006802 2.7e-115 419.5 361 64.5
PGR031G1627 Punica granatum HOM05D005526 ORTHO05D006802 4.6e-115 418.7 372 61.3
Sp5g35600 Schrenkiella parvula HOM05D005526 ORTHO05D006802 3.3e-113 412.5 362 61.9
AL3G17940 Arabidopsis lyrata HOM05D005526 ORTHO05D006802 1.6e-112 410.2 362 61.9
EL10Ac9g21940 Beta vulgaris HOM05D005526 ORTHO05D006802 8.0e-112 407.9 359 63.8
AL2G41300 Arabidopsis lyrata HOM05D005526 ORTHO05D006802 4.9e-109 398.7 362 61.3
Carub.0002s2731 Capsella rubella HOM05D005526 ORTHO05D006802 4.9e-109 398.7 361 59.8
Thhalv10018648m.g Eutrema salsugineum HOM05D005526 ORTHO05D006802 1.1e-108 397.5 362 61.6
CARHR074270 Cardamine hirsuta HOM05D005526 ORTHO05D006802 1.9e-108 396.7 363 60.9
Sc10g0005720 Simmondsia chinensis HOM05D005526 ORTHO05D006802 7.0e-108 394.8 361 60.7
BcaB02g07290 Brassica carinata HOM05D005526 ORTHO05D006802 6.0e-107 391.7 362 60.5
SGA_v2.0_scaffold16G07615 Striga asiatica HOM05D005526 ORTHO05D006802 6.0e-107 391.7 327 62.7
Oeu052283.1 Olea europaea HOM05D005526 ORTHO05D006802 1.0e-106 391.0 333 66.7
AT3G06820 Arabidopsis thaliana HOM05D005526 ORTHO05D006802 9.5e-105 384.4 362 60.5
arahy.Tifrunner.gnm1.ann1.IMA97E Arachis hypogaea HOM05D005526 ORTHO05D006802 8.1e-104 381.3 380 57.4
BraA07t30300Z Brassica rapa HOM05D005526 ORTHO05D006802 8.9e-103 377.9 362 58.8
A07p26570 Brassica napus HOM05D005526 ORTHO05D006802 2.6e-102 376.3 362 58.8
BcaC08g45297 Brassica carinata HOM05D005526 ORTHO05D006802 7.5e-102 374.8 362 58.6
C06p28990 Brassica napus HOM05D005526 ORTHO05D006802 9.8e-102 374.4 362 58.8
BolC6t38065H Brassica oleracea HOM05D005526 ORTHO05D006802 1.7e-101 373.6 362 58.6
AT1G80210 Arabidopsis thaliana HOM05D005526 ORTHO05D006802 4.9e-101 372.1 294 66.7
ClCG07G012810 Citrullus lanatus HOM05D005526 ORTHO05D006802 6.4e-101 371.7 330 63.3
unitig_899.g14780 Utricularia gibba HOM05D005526 ORTHO05D006802 7.8e-99 364.8 329 62.0
Peaxi162Scf00207g00731 Petunia axillaris HOM05D005526 ORTHO05D006802 3.3e-97 359.4 361 56.2
CiPaw.02G154800 Carya illinoinensis HOM05D005526 ORTHO05D006802 6.2e-96 355.1 244 74.6
Nitab4.5_0000620g0060 Nicotiana tabacum HOM05D005526 ORTHO05D006802 4.0e-95 352.4 338 59.5
AUR62011560 Chenopodium quinoa HOM05D005526 ORTHO05D006802 3.4e-94 349.4 328 61.6
Nitab4.5_0013710g0010 Nicotiana tabacum HOM05D005526 ORTHO05D006802 5.8e-94 348.6 362 58.0
Aa31LG4G500 Aethionema arabicum HOM05D005526 ORTHO05D006802 9.9e-94 347.8 300 63.3
HPP92_009843 Vanilla planifolia HOM05D005526 ORTHO05D006802 1.0e-90 337.8 308 59.1
CDE02G1452 Ceratophyllum demersum HOM05D005526 ORTHO05D006802 1.1e-89 334.3 353 54.7
Os05g0542600 Oryza sativa ssp. japonica HOM05D005526 ORTHO05D006802 1.9e-89 333.6 359 52.9
ATR1156G007 Amborella trichopoda HOM05D005526 ORTHO05D006802 3.6e-88 329.3 362 55.0
Zm00001eb294490 Zea mays HOM05D005526 ORTHO05D006802 4.0e-87 325.9 359 53.5
Haze_16513 Corylus avellana HOM05D005526 ORTHO05D006802 2.9e-85 319.7 226 72.1
Ah.01g020810 Amaranthus hybridus HOM05D005526 ORTHO05D006802 1.4e-84 317.4 333 58.0
FAN14G4362 Fragaria x ananassa HOM05D005526 ORTHO05D006802 2.1e-83 313.5 304 60.5
SEGI_35764 Sequoiadendron giganteum HOM05D005526 ORTHO05D006802 2.7e-83 313.2 361 49.6
SGA_v2.0_scaffold37G14789 Striga asiatica HOM05D005526 ORTHO05D006802 1.2e-62 244.6 310 49.7
Pp3c27_4740 Physcomitrium patens HOM05D005526 ORTHO05D006802 7.6e-62 241.9 360 43.9
CDE01G0292 Ceratophyllum demersum HOM05D005526 ORTHO05D006802 4.2e-60 236.1 313 47.3
Mapoly0053s0043 Marchantia polymorpha HOM05D005526 ORTHO05D006802 4.6e-59 232.6 332 44.9
CBR_g46861 Chara braunii HOM05D005526 ORTHO05D006802 2.1e-56 223.8 337 38.9
Oeu014842.2 Olea europaea HOM05D005526 ORTHO05D006802 5.5e-52 209.1 192 60.4
SMO196G0028 Selaginella moellendorffii HOM05D005526 ORTHO05D006802 2.4e-47 193.7 301 38.9
AagrBONN_evm.TU.Sc2ySwM_368.2431 Anthoceros agrestis HOM05D005526 ORTHO05D006802 2.0e-46 190.7 341 38.4
Sed0012845 Sechium edule HOM05D005526 ORTHO05D006802 2.2e-40 170.6 333 38.4
Zm00001eb342510 Zea mays HOM05D005526 ORTHO05D006802 1.8e-34 151.0 125 64.0
Haze_16512 Corylus avellana HOM05D005526 ORTHO05D006802 7.4e-33 145.6 107 72.9
SalBow8G0881 Salvia bowleyana HOM05D005526 ORTHO05D006802 2.5e-20 104.0 96 55.2
Cre11.g475400 Chlamydomonas reinhardtii HOM05D005526 ORTHO05D006802 3.4e-17 93.6 145 41.4
Pp3c25_2940 Physcomitrium patens HOM05D005526 ORTHO05D311957 1.6e-11 74.7 90 46.7
Pp3c6_24500 Physcomitrium patens HOM05D005526 ORTHO05D006802 5.7e-09 66.2 69 46.4


User provided reference genes

Program Settings