Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4A249G52 Lonicera japonica HOM05D006560 ORTHO05D008164 1.1e-276 956.1 487 100.0
Dinv28275 Davidia involucrata HOM05D006560 ORTHO05D008164 1.1e-135 487.6 456 58.3
TAR629G1839 Trochodendron aralioides HOM05D006560 ORTHO05D008164 1.8e-135 486.9 454 56.4
DCAR_014134 Daucus carota HOM05D006560 ORTHO05D008164 4.1e-135 485.7 505 55.4
CiPaw.04G006800 Carya illinoinensis HOM05D006560 ORTHO05D008164 2.2e-133 479.9 444 57.2
Cc07_g12560 Coffea canephora HOM05D006560 ORTHO05D008164 2.9e-133 479.6 502 54.4
Actinidia22879 Actinidia chinensis HOM05D006560 ORTHO05D008164 5.0e-133 478.8 481 56.3
GSVIVG01033201001 Vitis vinifera HOM05D006560 ORTHO05D008164 4.2e-132 475.7 526 51.9
Atru.chr1.2184 Acer truncatum HOM05D006560 ORTHO05D008164 2.1e-131 473.4 454 56.8
Prupe.8G267600 Prunus persica HOM05D006560 ORTHO05D008164 2.7e-131 473.0 443 58.0
Cfa008016 Carpinus fangiana HOM05D006560 ORTHO05D008164 2.2e-128 463.4 473 55.4
Hma1.2p1_0085F.1_g043920 Hydrangea macrophylla HOM05D006560 ORTHO05D008164 2.4e-127 459.9 457 57.3
RcHm_v2.0_Chr7g0242051 Rosa chinensis HOM05D006560 ORTHO05D008164 2.7e-126 456.4 453 55.6
Manes.01G126500 Manihot esculenta HOM05D006560 ORTHO05D008164 1.0e-125 454.5 442 57.0
MD09G1187400 Malus domestica HOM05D006560 ORTHO05D008164 1.3e-125 454.1 448 56.0
Haze_14043 Corylus avellana HOM05D006560 ORTHO05D008164 8.5e-125 451.4 473 55.4
QL02p055474 Quercus lobata HOM05D006560 ORTHO05D008164 2.1e-123 446.8 477 53.0
Potri.015G148300 Populus trichocarpa HOM05D006560 ORTHO05D008164 8.8e-122 441.4 454 54.2
Nitab4.5_0000108g0060 Nicotiana tabacum HOM05D006560 ORTHO05D008164 1.2e-121 441.0 494 52.6
FvH4_5g39750 Fragaria vesca HOM05D006560 ORTHO05D008164 3.4e-121 439.5 453 54.7
Lalb_Chr17g0345771 Lupinus albus HOM05D006560 ORTHO05D008164 5.7e-121 438.7 479 50.7
Glyma.14G208100 Glycine max HOM05D006560 ORTHO05D008164 9.8e-121 438.0 477 51.6
CAN.G809.82 Capsicum annuum HOM05D006560 ORTHO05D008164 1.3e-120 437.6 501 50.1
Solyc02g081520.3 Solanum lycopersicum HOM05D006560 ORTHO05D008164 8.3e-120 434.9 501 50.1
Migut.K01188 Erythranthe guttata HOM05D006560 ORTHO05D008164 2.4e-119 433.3 505 49.9
arahy.Tifrunner.gnm1.ann1.N6ISZX Arachis hypogaea HOM05D006560 ORTHO05D008164 7.0e-119 431.8 486 51.0
TWI77G0885 Tripterygium wilfordii HOM05D006560 ORTHO05D008164 1.6e-118 430.6 454 54.6
MSTRG.3663 Avicennia marina HOM05D006560 ORTHO05D008164 7.8e-118 428.3 511 49.9
arahy.Tifrunner.gnm1.ann1.RNL3QM Arachis hypogaea HOM05D006560 ORTHO05D008164 1.0e-117 427.9 486 50.6
SalBow5G2177 Salvia bowleyana HOM05D006560 ORTHO05D008164 1.0e-117 427.9 500 49.0
Lsat_1_v5_gn_3_69681 Lactuca sativa HOM05D006560 ORTHO05D008164 6.6e-117 425.2 472 50.8
Aqoxy3G04298 Aquilegia oxysepala HOM05D006560 ORTHO05D008164 1.5e-116 424.1 459 52.3
PSO063G7212 Papaver somniferum HOM05D006560 ORTHO05D008164 1.5e-116 424.1 472 50.2
PSO782G5584 Papaver somniferum HOM05D006560 ORTHO05D008164 2.5e-116 423.3 472 50.2
Phvul.008G242800 Phaseolus vulgaris HOM05D006560 ORTHO05D008164 3.3e-116 422.9 482 48.5
QL02p056517 Quercus lobata HOM05D006560 ORTHO05D008164 1.4e-114 417.5 634 42.4
VMungo0647G2139 Vigna mungo HOM05D006560 ORTHO05D008164 2.3e-114 416.8 484 47.5
ECA246G0244 Erigeron canadensis HOM05D006560 ORTHO05D008164 4.0e-114 416.0 462 50.2
CANSAT64G2566 Cannabis sativa HOM05D006560 ORTHO05D008164 1.2e-113 414.5 495 48.5
Medtr5g076180 Medicago truncatula HOM05D006560 ORTHO05D008164 1.5e-113 414.1 517 47.2
Hund12951 Selenicereus undatus HOM05D006560 ORTHO05D008164 3.4e-113 412.9 491 49.3
Rhsim10G0187300 Rhododendron simsii HOM05D006560 ORTHO05D008164 5.7e-113 412.1 578 45.5
HanXRQChr16g0532681 Helianthus annuus HOM05D006560 ORTHO05D008164 2.9e-112 409.8 459 49.7
vmacro20436 Vaccinium macrocarpon HOM05D006560 ORTHO05D008164 6.4e-112 408.7 464 50.9
Thecc.04G055900 Theobroma cacao HOM05D006560 ORTHO05D008164 7.8e-110 401.7 452 48.7
TPR.G15397 Trifolium pratense HOM05D006560 ORTHO05D008164 1.3e-109 401.0 503 45.9
PGSC0003DMG400017739 Solanum tuberosum HOM05D006560 ORTHO05D008164 3.9e-109 399.4 529 46.5
PGR102G0946 Punica granatum HOM05D006560 ORTHO05D008164 5.0e-109 399.1 450 50.7
AUR62014236 Chenopodium quinoa HOM05D006560 ORTHO05D008164 1.5e-108 397.5 466 49.1
Psat2g048560 Pisum sativum HOM05D006560 ORTHO05D008164 1.5e-108 397.5 494 46.8
Sabra16G0321300 Salix brachista HOM05D006560 ORTHO05D008164 1.9e-108 397.1 499 48.5
LjContig00141g0007295 Lotus japonicus HOM05D006560 ORTHO05D008164 3.3e-108 396.4 485 48.0
Ca_05740_v3 Cicer arietinum L. HOM05D006560 ORTHO05D008164 1.6e-107 394.0 472 46.8
Eucgr.B03794 Eucalyptus grandis HOM05D006560 ORTHO05D008164 1.6e-107 394.0 507 45.2
Sc09g0004640 Simmondsia chinensis HOM05D006560 ORTHO05D008164 4.7e-107 392.5 489 45.8
COL.COLO4_13435 Corchorus olitorius HOM05D006560 ORTHO05D008164 6.2e-107 392.1 470 48.1
Duzib138G1900 Durio zibethinus HOM05D006560 ORTHO05D008164 6.8e-106 388.7 451 46.6
Sabra15G0156900 Salix brachista HOM05D006560 ORTHO05D008164 6.8e-106 388.7 497 48.7
Sabra16G0322200 Salix brachista HOM05D006560 ORTHO05D008164 1.5e-105 387.5 491 48.9
SGA_v2.0_scaffold45G17096 Striga asiatica HOM05D006560 ORTHO05D008164 2.0e-105 387.1 515 46.0
Gohir.A12G053000 Gossypium hirsutum HOM05D006560 ORTHO05D008164 5.8e-105 385.6 452 47.6
Nitab4.5_0003580g0010 Nicotiana tabacum HOM05D006560 ORTHO05D008164 1.3e-104 384.4 439 50.3
ClCG05G011330 Citrullus lanatus HOM05D006560 ORTHO05D008164 4.9e-104 382.5 458 48.5
EL10Ac6g14054 Beta vulgaris HOM05D006560 ORTHO05D008164 1.1e-103 381.3 489 45.4
MBI03_g13822_MAGBIO Magnolia biondii HOM05D006560 ORTHO05D008164 4.6e-102 375.9 459 47.7
Gorai.008G054800 Gossypium raimondii HOM05D006560 ORTHO05D008164 2.5e-100 370.2 471 45.9
CsaV3_3G021130 Cucumis sativus L. HOM05D006560 ORTHO05D008164 1.2e-99 367.9 458 48.7
Gohir.D12G051500 Gossypium hirsutum HOM05D006560 ORTHO05D008164 1.2e-99 367.9 471 45.9
MELO3C020249.2 Cucumis melo HOM05D006560 ORTHO05D008164 2.8e-99 366.7 458 47.4
Ah.14g086100 Amaranthus hybridus HOM05D006560 ORTHO05D008164 8.9e-98 361.7 486 44.2
Sed0010007 Sechium edule HOM05D006560 ORTHO05D008164 5.8e-97 359.0 455 46.2
AUR62038458 Chenopodium quinoa HOM05D006560 ORTHO05D008164 6.4e-96 355.5 466 46.8
Glyma.02G239200 Glycine max HOM05D006560 ORTHO05D008164 1.3e-93 347.8 432 45.8
Hma1.2p1_0085F.1_g043970 Hydrangea macrophylla HOM05D006560 ORTHO05D008164 2.8e-91 340.1 363 54.8
Oeu060825.3 Olea europaea HOM05D006560 ORTHO05D008164 4.0e-90 336.3 508 44.3
Sp3g01710 Schrenkiella parvula HOM05D006560 ORTHO05D008164 1.2e-89 334.7 482 42.1
Aa31LG5G13150 Aethionema arabicum HOM05D006560 ORTHO05D008164 2.6e-89 333.6 494 40.1
AL3G12070 Arabidopsis lyrata HOM05D006560 ORTHO05D008164 3.4e-89 333.2 488 40.4
A05p44410 Brassica napus HOM05D006560 ORTHO05D008164 5.1e-85 319.3 476 40.3
Migut.L00953 Erythranthe guttata HOM05D006560 ORTHO05D008164 3.3e-84 316.6 439 44.0
CARHR076680 Cardamine hirsuta HOM05D006560 ORTHO05D008164 2.8e-83 313.5 492 39.2
Cpa.g.sc108.22 Carica papaya HOM05D006560 ORTHO05D008164 8.1e-83 312.0 410 47.1
ATR0618G008 Amborella trichopoda HOM05D006560 ORTHO05D008164 2.0e-81 307.4 417 43.6
Thhalv10020468m.g Eutrema salsugineum HOM05D006560 ORTHO05D008164 2.2e-80 303.9 482 40.2
Os10g0487300 Oryza sativa ssp. japonica HOM05D006560 ORTHO05D008164 4.2e-79 299.7 478 39.1
Carub.0003s0178 Capsella rubella HOM05D006560 ORTHO05D008164 2.1e-78 297.4 483 38.3
Migut.L00936 Erythranthe guttata HOM05D006560 ORTHO05D008164 2.1e-78 297.4 422 43.6
HPP92_015158 Vanilla planifolia HOM05D006560 ORTHO05D008164 3.5e-78 296.6 498 39.4
AT3G02680 Arabidopsis thaliana HOM05D006560 ORTHO05D008164 1.5e-76 291.2 487 37.6
SHI09016 Sapria himalayana HOM05D006560 ORTHO05D008164 2.5e-76 290.4 419 42.2
BcaC05g30516 Brassica carinata HOM05D006560 ORTHO05D008164 7.3e-76 288.9 473 38.3
C09p75830 Brassica napus HOM05D006560 ORTHO05D008164 4.8e-75 286.2 466 38.0
BolC5t35073H Brassica oleracea HOM05D006560 ORTHO05D008164 1.1e-74 285.0 477 37.5
BraA06t23296Z Brassica rapa HOM05D006560 ORTHO05D008164 6.9e-74 282.3 480 37.1
Peaxi162Scf00344g01815 Petunia axillaris HOM05D006560 ORTHO05D008164 3.3e-68 263.5 448 39.5
CDE04G3361 Ceratophyllum demersum HOM05D006560 ORTHO05D008164 4.3e-68 263.1 367 44.4
Zm00001eb221260 Zea mays HOM05D006560 ORTHO05D008164 1.6e-67 261.2 473 35.9
SEGI_37812 Sequoiadendron giganteum HOM05D006560 ORTHO05D008164 3.9e-61 240.0 538 32.3
Sopen02g026150 Solanum pennellii HOM05D006560 ORTHO05D008164 1.4e-58 231.5 339 43.4
BcaC05g30567 Brassica carinata HOM05D006560 ORTHO05D008164 3.0e-53 213.8 274 40.1
unitig_748.g7016 Utricularia gibba HOM05D006560 ORTHO05D008164 2.0e-49 201.1 490 33.7
Ciclev10012792m.g Citrus clementina HOM05D006560 ORTHO05D008164 3.0e-45 187.2 156 60.3
Ciclev10013450m.g Citrus clementina HOM05D006560 ORTHO05D008164 5.3e-42 176.4 304 41.4
SMO169G0207 Selaginella moellendorffii HOM05D006560 ORTHO05D008164 8.5e-40 169.1 506 29.6
Nn3g18627 Nelumbo nucifera HOM05D006560 ORTHO05D008164 1.2e-38 165.2 139 58.3
CSS0021055 Camellia sinensis var. sinensis HOM05D000185 ORTHO05D000105 1.4e-34 151.8 158 54.4
CSS0034206 Camellia sinensis var. sinensis HOM05D006560 ORTHO05D008164 7.7e-33 146.0 195 50.3
Migut.L00946 Erythranthe guttata HOM05D006560 ORTHO05D008164 1.4e-31 141.7 159 47.8
Pp3c4_14090 Physcomitrium patens HOM05D006560 ORTHO05D008164 7.4e-28 129.4 301 31.9
Hma1.2p1_0085F.1_g043960 Hydrangea macrophylla HOM05D006560 ORTHO05D008164 3.7e-27 127.1 102 62.7
Hma1.2p1_0085F.1_g043925 Hydrangea macrophylla HOM05D006560 ORTHO05D008164 8.2e-27 125.9 102 62.7
FAN08G2099 Fragaria x ananassa HOM05D006560 ORTHO05D008164 5.9e-25 119.8 96 61.5
TPR.G36125 Trifolium pratense HOM05D006560 ORTHO05D008164 2.0e-20 104.8 84 58.3
Migut.L00937 Erythranthe guttata HOM05D006560 ORTHO05D008164 4.8e-19 100.1 66 71.2
Migut.L00945 Erythranthe guttata HOM05D006560 ORTHO05D008164 2.4e-18 97.8 65 70.8
Nn3g18626 Nelumbo nucifera HOM05D006560 ORTHO05D008164 3.6e-14 84.0 65 66.2
FAN18G2665 Fragaria x ananassa HOM05D006560 ORTHO05D008164 3.1e-10 70.9 53 64.2
Ciclev10013286m.g Citrus clementina HOM05D006560 ORTHO05D008164 3.5e-09 67.4 58 55.2


User provided reference genes

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