Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2g0007837 Lotus japonicus HOM05D001054 ORTHO05D007110 0.0e+00 1230.3 596 100.0
Glyma.11G049900 Glycine max HOM05D001054 ORTHO05D007110 5.5e-275 950.7 539 85.7
Psat2g170280 Pisum sativum HOM05D001054 ORTHO05D007110 1.3e-271 939.5 537 83.6
TPR.G20955 Trifolium pratense HOM05D001054 ORTHO05D007110 1.3e-271 939.5 540 83.5
Medtr5g016070 Medicago truncatula HOM05D001054 ORTHO05D007110 8.2e-271 936.8 535 84.5
Phvul.002G012600 Phaseolus vulgaris HOM05D001054 ORTHO05D007110 1.8e-270 935.6 535 83.9
Glyma.01G192200 Glycine max HOM05D001054 ORTHO05D007110 5.9e-269 930.6 536 84.1
VMungo1215G2035 Vigna mungo HOM05D001054 ORTHO05D007110 8.5e-268 926.8 535 83.4
Ca_24720_v3 Cicer arietinum L. HOM05D001054 ORTHO05D007110 2.5e-267 925.2 535 82.6
arahy.Tifrunner.gnm1.ann1.5YK3TE Arachis hypogaea HOM05D001054 ORTHO05D007110 1.1e-259 899.8 537 81.6
CANSAT01G2549 Cannabis sativa HOM05D001054 ORTHO05D007110 9.4e-259 896.7 539 81.6
Sed0014779 Sechium edule HOM05D001054 ORTHO05D007110 1.6e-258 896.0 538 80.1
Lalb_Chr05g0213551 Lupinus albus HOM05D001054 ORTHO05D007110 6.1e-258 894.0 537 81.9
Eucgr.C03692 Eucalyptus grandis HOM05D001054 ORTHO05D007110 1.0e-257 893.3 543 79.6
TWI09G0178 Tripterygium wilfordii HOM05D001054 ORTHO05D007110 3.0e-257 891.7 538 80.5
Sed0024674 Sechium edule HOM05D001054 ORTHO05D007110 8.8e-257 890.2 538 80.5
TAR625G0225 Trochodendron aralioides HOM05D001054 ORTHO05D007110 1.2e-256 889.8 543 79.9
Nn7g37208 Nelumbo nucifera HOM05D001054 ORTHO05D007110 4.4e-256 887.9 543 80.1
Lalb_Chr09g0323511 Lupinus albus HOM05D001054 ORTHO05D007110 5.7e-256 887.5 548 80.7
Eucgr.C03920 Eucalyptus grandis HOM05D001054 ORTHO05D007110 9.7e-256 886.7 541 78.7
ClCG01G017380 Citrullus lanatus HOM05D001054 ORTHO05D007110 1.3e-255 886.3 538 80.5
FvH4_1g17270 Fragaria vesca HOM05D001054 ORTHO05D007110 1.7e-255 885.9 540 80.2
CsaV3_6G043910 Cucumis sativus L. HOM05D001054 ORTHO05D007110 2.2e-255 885.6 538 79.9
Thecc.01G069100 Theobroma cacao HOM05D001054 ORTHO05D007110 4.8e-255 884.4 535 81.5
Cpa.g.sc6.46 Carica papaya HOM05D001054 ORTHO05D007110 1.8e-254 882.5 539 80.3
Gorai.008G080600 Gossypium raimondii HOM05D001054 ORTHO05D007110 3.1e-254 881.7 536 81.2
Prupe.6G223800 Prunus persica HOM05D001054 ORTHO05D007110 4.1e-254 881.3 539 79.6
MELO3C007616.2 Cucumis melo HOM05D001054 ORTHO05D007110 5.3e-254 880.9 564 77.0
MSTRG.23690 Avicennia marina HOM05D001054 ORTHO05D007110 7.0e-254 880.6 535 81.1
COL.COLO4_11542 Corchorus olitorius HOM05D001054 ORTHO05D007110 2.7e-253 878.6 535 80.2
Gohir.D12G073300 Gossypium hirsutum HOM05D001054 ORTHO05D007110 2.7e-253 878.6 536 80.8
PGR004G0129 Punica granatum HOM05D001054 ORTHO05D007110 7.7e-253 877.1 538 79.7
arahy.Tifrunner.gnm1.ann1.SB8Z2H Arachis hypogaea HOM05D001054 ORTHO05D007110 1.0e-252 876.7 560 77.7
FAN19G1445 Fragaria x ananassa HOM05D001054 ORTHO05D007110 1.0e-252 876.7 549 78.7
Hma1.2p1_0017F.1_g012090 Hydrangea macrophylla HOM05D001054 ORTHO05D007110 5.0e-252 874.4 545 79.1
Cfa004102 Carpinus fangiana HOM05D001054 ORTHO05D007110 1.5e-251 872.8 541 79.7
Manes.13G113500 Manihot esculenta HOM05D001054 ORTHO05D007110 4.2e-251 871.3 535 79.6
Atru.chr3.194 Acer truncatum HOM05D001054 ORTHO05D007110 9.4e-251 870.2 536 79.7
FAN23G1327 Fragaria x ananassa HOM05D001054 ORTHO05D007110 2.7e-250 868.6 562 76.9
TAR628G0943 Trochodendron aralioides HOM05D001054 ORTHO05D007110 2.7e-250 868.6 538 78.4
FAN26G1436 Fragaria x ananassa HOM05D001054 ORTHO05D007110 3.6e-250 868.2 575 75.3
Oeu013280.1 Olea europaea HOM05D001054 ORTHO05D007110 4.7e-250 867.8 535 80.0
Cc07_g06840 Coffea canephora HOM05D001054 ORTHO05D007110 1.0e-249 866.7 544 78.5
SalBow6G1211 Salvia bowleyana HOM05D001054 ORTHO05D007110 6.8e-249 864.0 535 78.7
RcHm_v2.0_Chr2g0107461 Rosa chinensis HOM05D001054 ORTHO05D007110 8.8e-249 863.6 594 73.2
Atru.chr3.165 Acer truncatum HOM05D001054 ORTHO05D007110 1.2e-248 863.2 539 78.8
Ciclev10025341m.g Citrus clementina HOM05D001054 ORTHO05D007110 1.2e-248 863.2 538 77.7
Duzib264G0621 Durio zibethinus HOM05D001054 ORTHO05D007110 1.2e-248 863.2 535 79.6
CiPaw.01G007000 Carya illinoinensis HOM05D001054 ORTHO05D007110 1.5e-248 862.8 536 79.3
MBI19_g10811_MAGBIO Magnolia biondii HOM05D001054 ORTHO05D007110 1.5e-248 862.8 535 79.8
PSO541G5579 Papaver somniferum HOM05D001054 ORTHO05D007110 3.4e-248 861.7 520 80.2
Lj7C88G8 Lonicera japonica HOM05D001054 ORTHO05D007110 4.4e-248 861.3 538 78.4
Aa31LG6G14390 Aethionema arabicum HOM05D001054 ORTHO05D007110 7.5e-248 860.5 536 78.7
PSO675G2247 Papaver somniferum HOM05D001054 ORTHO05D007110 1.7e-247 859.4 520 80.0
AT4G37510 Arabidopsis thaliana HOM05D001054 ORTHO05D007110 4.8e-247 857.8 537 78.4
PGSC0003DMG400023692 Solanum tuberosum HOM05D001054 ORTHO05D007110 4.8e-247 857.8 535 78.9
AL7G13250 Arabidopsis lyrata HOM05D001054 ORTHO05D007110 8.3e-247 857.1 534 78.7
Migut.H00367 Erythranthe guttata HOM05D001054 ORTHO05D007110 1.1e-246 856.7 541 78.2
Solyc10g080040.3 Solanum lycopersicum HOM05D001054 ORTHO05D007110 1.1e-246 856.7 593 73.7
Sopen10g030650 Solanum pennellii HOM05D001054 ORTHO05D007110 2.4e-246 855.5 535 78.7
Carub.0007s0278 Capsella rubella HOM05D001054 ORTHO05D007110 7.0e-246 854.0 535 77.9
HanXRQChr14g0441861 Helianthus annuus HOM05D001054 ORTHO05D007110 7.0e-246 854.0 589 72.5
Potri.007G053000 Populus trichocarpa HOM05D001054 ORTHO05D007110 9.1e-246 853.6 536 77.1
Thhalv10024858m.g Eutrema salsugineum HOM05D001054 ORTHO05D007110 1.2e-245 853.2 535 78.3
CARHR245910 Cardamine hirsuta HOM05D001054 ORTHO05D007110 7.7e-245 850.5 536 78.0
Sp7g35190 Schrenkiella parvula HOM05D001054 ORTHO05D007110 1.0e-244 850.1 536 78.0
THA.LOC104807624 Tarenaya hassleriana HOM05D001054 ORTHO05D007110 1.3e-244 849.7 535 78.5
Aqoxy2G00045 Aquilegia oxysepala HOM05D001054 ORTHO05D007110 1.7e-244 849.4 540 78.1
CDE04G1953 Ceratophyllum demersum HOM05D001054 ORTHO05D007110 5.0e-244 847.8 538 78.1
Haze_15309 Corylus avellana HOM05D001054 ORTHO05D007110 5.0e-244 847.8 559 76.2
DCAR_010834 Daucus carota HOM05D001054 ORTHO05D007110 5.5e-243 844.3 552 76.3
Sabra07G0046600 Salix brachista HOM05D001054 ORTHO05D007110 5.5e-243 844.3 536 77.2
Sc16g0004970 Simmondsia chinensis HOM05D001054 ORTHO05D007110 1.2e-242 843.2 542 77.5
Nitab4.5_0006689g0010 Nicotiana tabacum HOM05D001054 ORTHO05D007110 2.8e-242 842.0 535 78.1
Rhsim10G0102900 Rhododendron simsii HOM05D001054 ORTHO05D007110 2.8e-242 842.0 590 71.5
Peaxi162Scf00365g00936 Petunia axillaris HOM05D001054 ORTHO05D007110 3.6e-242 841.6 534 78.1
ATR1096G061 Amborella trichopoda HOM05D001054 ORTHO05D007110 1.2e-240 836.6 558 74.7
arahy.Tifrunner.gnm1.ann1.UKA06W Arachis hypogaea HOM05D001054 ORTHO05D007110 1.5e-240 836.3 547 75.9
arahy.Tifrunner.gnm1.ann1.S94KHE Arachis hypogaea HOM05D001054 ORTHO05D007110 2.6e-240 835.5 562 74.2
A01p01450 Brassica napus HOM05D001054 ORTHO05D007110 2.6e-240 835.5 539 77.2
BraA01t00139Z Brassica rapa HOM05D001054 ORTHO05D007110 3.4e-240 835.1 539 77.0
Nitab4.5_0002331g0050 Nicotiana tabacum HOM05D001054 ORTHO05D007110 3.4e-240 835.1 535 77.8
arahy.Tifrunner.gnm1.ann1.AR4BCX Arachis hypogaea HOM05D001054 ORTHO05D007110 4.4e-240 834.7 547 75.7
SGA_v2.0_scaffold72G24093 Striga asiatica HOM05D001054 ORTHO05D007110 9.8e-240 833.6 535 76.1
arahy.Tifrunner.gnm1.ann1.V4EKGG Arachis hypogaea HOM05D001054 ORTHO05D007110 1.7e-239 832.8 562 74.2
BolC1t00157H Brassica oleracea HOM05D001054 ORTHO05D007110 2.2e-239 832.4 538 76.6
BcaNung03665 Brassica carinata HOM05D001054 ORTHO05D007110 2.8e-239 832.0 545 76.1
C01p01620 Brassica napus HOM05D001054 ORTHO05D007110 2.8e-239 832.0 545 76.1
SGA_v2.0_scaffold15G07420 Striga asiatica HOM05D001054 ORTHO05D007110 3.7e-239 831.6 510 77.8
AUR62003982 Chenopodium quinoa HOM05D001054 ORTHO05D007110 1.8e-238 829.3 538 75.5
AUR62040267 Chenopodium quinoa HOM05D001054 ORTHO05D007110 2.4e-238 828.9 538 75.3
EL10Ac6g15648 Beta vulgaris HOM05D001054 ORTHO05D007110 7.0e-238 827.4 538 75.7
DCAR_021470 Daucus carota HOM05D001054 ORTHO05D007110 2.3e-236 822.4 527 77.4
BcaNung05084 Brassica carinata HOM05D001054 ORTHO05D007110 2.1e-234 815.8 529 76.4
Lsat_1_v5_gn_2_83701 Lactuca sativa HOM05D001054 ORTHO05D007110 4.7e-234 814.7 539 73.8
Hund13932 Selenicereus undatus HOM05D001054 ORTHO05D007110 1.8e-233 812.8 539 74.4
VMungo0251G1033 Vigna mungo HOM05D001054 ORTHO05D007110 2.0e-232 809.3 536 73.7
unitig_0.g506 Utricularia gibba HOM05D001054 ORTHO05D007110 3.4e-232 808.5 482 81.1
Phvul.003G236900 Phaseolus vulgaris HOM05D001054 ORTHO05D007110 1.4e-230 803.1 534 73.4
Lj4g0019986 Lotus japonicus HOM05D001054 ORTHO05D007110 3.5e-229 798.5 546 70.9
Os01g0810100 Oryza sativa ssp. japonica HOM05D001054 ORTHO05D007110 1.9e-227 792.7 480 78.8
HPP92_018502 Vanilla planifolia HOM05D001054 ORTHO05D007110 5.8e-224 781.2 538 72.5
CSS0030463 Camellia sinensis var. sinensis HOM05D001054 ORTHO05D007110 8.3e-223 777.3 542 72.0
TPR.G23864 Trifolium pratense HOM05D001054 ORTHO05D007110 1.1e-217 760.4 544 68.4
HPP92_017544 Vanilla planifolia HOM05D001054 ORTHO05D007110 7.1e-214 747.7 477 74.4
Medtr4g095410 Medicago truncatula HOM05D001054 ORTHO05D007110 3.0e-212 742.3 528 70.3
Zm00001eb150280 Zea mays HOM05D001054 ORTHO05D007110 1.8e-201 706.4 462 74.0
Ah.02g125600 Amaranthus hybridus HOM05D001054 ORTHO05D007110 4.4e-200 701.8 426 77.2
Gohir.A12G075200 Gossypium hirsutum HOM05D001054 ORTHO05D007110 3.2e-198 695.7 433 79.0
ECA238G1085 Erigeron canadensis HOM05D001054 ORTHO05D007110 3.5e-197 692.2 398 80.4
Psat4g083600 Pisum sativum HOM05D001054 ORTHO05D007110 2.7e-189 666.0 397 77.8
Dinv26904 Davidia involucrata HOM05D001054 ORTHO05D007110 2.0e-184 649.8 408 78.9
Actinidia36442 Actinidia chinensis HOM05D001054 ORTHO05D007110 3.1e-177 625.9 511 63.6
CSS0024742 Camellia sinensis var. sinensis HOM05D001054 ORTHO05D007110 1.4e-166 590.5 329 82.4
HPP92_017568 Vanilla planifolia HOM05D001054 ORTHO05D007110 9.1e-153 544.7 390 69.2
AL5G41245 Arabidopsis lyrata HOM05D001054 ORTHO05D007110 2.6e-152 543.1 403 71.0
Mapoly0005s0153 Marchantia polymorpha HOM05D001054 ORTHO05D007110 7.7e-152 541.6 451 57.2
Pp3c5_10700 Physcomitrium patens HOM05D001054 ORTHO05D007110 1.3e-146 524.2 470 56.2
GSVIVG01000148001 Vitis vinifera HOM05D001054 ORTHO05D007110 8.0e-141 505.0 283 82.0
SEGI_29234 Sequoiadendron giganteum HOM05D001054 ORTHO05D007110 2.4e-129 466.8 366 63.7
SMO119G0428 Selaginella moellendorffii HOM05D001054 ORTHO05D007110 1.7e-127 460.7 453 51.7
AagrBONN_evm.TU.Sc2ySwM_368.879 Anthoceros agrestis HOM05D001054 ORTHO05D007110 5.0e-127 459.1 465 51.2
Glyma.05G104100 Glycine max HOM05D001054 ORTHO05D007110 2.5e-126 456.8 337 68.5
vmacro05387 Vaccinium macrocarpon HOM05D001054 ORTHO05D007110 2.0e-123 447.2 346 63.9
vmacro05388 Vaccinium macrocarpon HOM05D001054 ORTHO05D007110 8.3e-106 388.7 270 74.1
FAN28G0670 Fragaria x ananassa HOM05D001054 ORTHO05D007110 3.6e-93 346.7 234 78.2
MD15G1293700 Malus domestica HOM05D001054 ORTHO05D007110 4.9e-82 309.7 182 78.6
Duzib147G0207 Durio zibethinus HOM05D001054 ORTHO05D007110 3.9e-79 300.1 181 80.1
AL7G13080 Arabidopsis lyrata HOM05D001054 ORTHO05D007110 9.9e-75 285.4 171 77.2
SEGI_10508 Sequoiadendron giganteum HOM05D001054 ORTHO05D007110 1.3e-53 215.3 134 73.9
Actinidia11996 Actinidia chinensis HOM05D001054 ORTHO05D007110 5.3e-44 183.3 114 76.3
Eucgr.C03694 Eucalyptus grandis HOM05D001054 ORTHO05D026867 1.8e-36 158.3 102 72.5
Actinidia11995 Actinidia chinensis HOM05D001054 ORTHO05D038022 3.2e-33 147.5 81 81.5
Oeu038701.1 Olea europaea HOM05D001054 ORTHO05D038022 5.5e-25 120.2 66 83.3
C07p62420 Brassica napus HOM05D001054 ORTHO05D007110 1.8e-20 105.1 53 88.7
BcaNung02059 Brassica carinata HOM05D001054 ORTHO05D007110 3.5e-19 100.9 50 90.0
AT2G48121 Arabidopsis thaliana HOM05D001054 ORTHO05D026867 3.0e-15 87.8 56 73.2
A03p65210 Brassica napus HOM05D001054 ORTHO05D026867 2.0e-14 85.1 66 62.1
BraA03t15579Z Brassica rapa HOM05D001054 ORTHO05D026867 2.0e-14 85.1 66 62.1
Sed0007349 Sechium edule HOM05D001054 ORTHO05D007110 5.4e-12 77.0 65 66.2


User provided reference genes

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