Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2A831T23 Lonicera japonica HOM05D004977 ORTHO05D006454 5.5e-100 367.9 216 100.0
Dinv18862 Davidia involucrata HOM05D004977 ORTHO05D006454 5.6e-60 235.0 225 68.0
CSS0048805 Camellia sinensis var. sinensis HOM05D004977 ORTHO05D006454 7.3e-60 234.6 138 83.3
QL01p019084 Quercus lobata HOM05D004977 ORTHO05D006454 7.3e-60 234.6 134 85.8
GSVIVG01037357001 Vitis vinifera HOM05D004977 ORTHO05D006454 9.5e-60 234.2 182 71.4
Haze_23597 Corylus avellana HOM05D004977 ORTHO05D006454 1.2e-59 233.8 134 87.3
TWI31G0709 Tripterygium wilfordii HOM05D004977 ORTHO05D006454 1.2e-59 233.8 179 74.9
vmacro04053 Vaccinium macrocarpon HOM05D004977 ORTHO05D006454 1.2e-59 233.8 134 85.8
Actinidia04910 Actinidia chinensis HOM05D004977 ORTHO05D006454 2.1e-59 233.0 134 84.3
Lj3g0003647 Lotus japonicus HOM05D004977 ORTHO05D006454 2.8e-59 232.6 178 80.3
TWI79G0798 Tripterygium wilfordii HOM05D004977 ORTHO05D006454 1.8e-58 229.9 210 67.6
Nn6g34596 Nelumbo nucifera HOM05D004977 ORTHO05D006454 2.3e-58 229.6 212 69.3
QL01p019105 Quercus lobata HOM05D004977 ORTHO05D006454 2.3e-58 229.6 162 73.5
Ciclev10027762m.g Citrus clementina HOM05D004977 ORTHO05D006454 1.2e-57 227.3 136 83.8
Psat7g203480 Pisum sativum HOM05D004977 ORTHO05D006454 2.0e-57 226.5 178 72.5
Potri.001G213900 Populus trichocarpa HOM05D004977 ORTHO05D006454 2.0e-57 226.5 177 72.9
Sc11g0002670 Simmondsia chinensis HOM05D004977 ORTHO05D006454 3.4e-57 225.7 173 78.0
Oeu058189.1 Olea europaea HOM05D004977 ORTHO05D006454 4.4e-57 225.3 134 85.8
CiPaw.13G126500 Carya illinoinensis HOM05D004977 ORTHO05D006454 5.8e-57 224.9 132 85.6
Migut.D02375 Erythranthe guttata HOM05D004977 ORTHO05D006454 7.5e-57 224.6 162 83.3
ECA234G1388 Erigeron canadensis HOM05D004977 ORTHO05D006454 1.3e-56 223.8 135 81.5
BcaC03g13854 Brassica carinata HOM05D004977 ORTHO05D006454 1.7e-56 223.4 185 77.3
BolC2t07133H Brassica oleracea HOM05D004977 ORTHO05D006454 1.7e-56 223.4 185 77.3
TPR.G4657 Trifolium pratense HOM05D004977 ORTHO05D006454 1.7e-56 223.4 139 79.9
Aa31LG1G13410 Aethionema arabicum HOM05D004977 ORTHO05D006454 2.2e-56 223.0 183 70.5
MD05G1047200 Malus domestica HOM05D004977 ORTHO05D006454 2.9e-56 222.6 212 59.9
AL6G32970 Arabidopsis lyrata HOM05D004977 ORTHO05D006454 3.7e-56 222.2 168 73.2
Migut.D02372 Erythranthe guttata HOM05D004977 ORTHO05D006454 4.9e-56 221.9 132 84.1
Prupe.8G068000 Prunus persica HOM05D004977 ORTHO05D006454 4.9e-56 221.9 181 65.2
PGR044G2329 Punica granatum HOM05D004977 ORTHO05D006454 6.4e-56 221.5 177 77.4
SGA_v2.0_scaffold7G04011 Striga asiatica HOM05D004977 ORTHO05D006454 6.4e-56 221.5 133 85.0
TAR636G3193 Trochodendron aralioides HOM05D004977 ORTHO05D006454 6.4e-56 221.5 207 69.1
DCAR_018210 Daucus carota HOM05D004977 ORTHO05D006454 1.1e-55 220.7 131 81.7
Eucgr.J00591 Eucalyptus grandis HOM05D004977 ORTHO05D006454 1.1e-55 220.7 174 75.9
Gohir.A05G395800 Gossypium hirsutum HOM05D004977 ORTHO05D006454 1.9e-55 219.9 138 80.4
MELO3C014528.2 Cucumis melo HOM05D004977 ORTHO05D006454 2.4e-55 219.5 182 70.9
Gohir.D04G019200 Gossypium hirsutum HOM05D004977 ORTHO05D006454 3.2e-55 219.2 138 79.7
Gorai.012G023000 Gossypium raimondii HOM05D004977 ORTHO05D006454 3.2e-55 219.2 138 79.7
Peaxi162Scf00401g00211 Petunia axillaris HOM05D004977 ORTHO05D006454 3.2e-55 219.2 121 88.4
Carub.0006s1965 Capsella rubella HOM05D004977 ORTHO05D006454 5.4e-55 218.4 165 74.5
Thhalv10012587m.g Eutrema salsugineum HOM05D004977 ORTHO05D006454 5.4e-55 218.4 173 74.0
THA.LOC104810945 Tarenaya hassleriana HOM05D004977 ORTHO05D006454 5.4e-55 218.4 135 79.3
TAR633G0771 Trochodendron aralioides HOM05D004977 ORTHO05D006454 5.4e-55 218.4 170 76.5
Aqoxy1G00589 Aquilegia oxysepala HOM05D004977 ORTHO05D006454 7.1e-55 218.0 170 78.2
AT5G22010 Arabidopsis thaliana HOM05D004977 ORTHO05D006454 7.1e-55 218.0 137 80.3
MD07G1072700 Malus domestica HOM05D004977 ORTHO05D006454 9.2e-55 217.6 190 70.5
HanXRQChr16g0525891 Helianthus annuus HOM05D004977 ORTHO05D006454 1.2e-54 217.2 154 72.7
Phvul.011G100500 Phaseolus vulgaris HOM05D004977 ORTHO05D006454 1.6e-54 216.9 170 73.5
VMungo1127G1403 Vigna mungo HOM05D004977 ORTHO05D006454 1.6e-54 216.9 174 77.0
Lalb_Chr01g0005801 Lupinus albus HOM05D004977 ORTHO05D006454 2.7e-54 216.1 210 63.3
Medtr4g050180 Medicago truncatula HOM05D004977 ORTHO05D006454 2.7e-54 216.1 137 79.6
CANSAT25G3123 Cannabis sativa HOM05D004977 ORTHO05D006454 3.5e-54 215.7 141 80.1
BNapus_Darmor_BZH_scaffold_38p00910 Brassica napus HOM05D004977 ORTHO05D006454 4.6e-54 215.3 189 74.1
CsaV3_6G038660 Cucumis sativus L. HOM05D004977 ORTHO05D006454 7.8e-54 214.5 174 70.1
SalBow6G4955 Salvia bowleyana HOM05D004977 ORTHO05D006454 1.0e-53 214.2 194 71.1
MSTRG.21010 Avicennia marina HOM05D004977 ORTHO05D006454 1.3e-53 213.8 132 81.8
CARHR191520 Cardamine hirsuta HOM05D004977 ORTHO05D006454 1.3e-53 213.8 137 78.8
FvH4_3g28250 Fragaria vesca HOM05D004977 ORTHO05D006454 1.7e-53 213.4 185 71.4
BcaB05g22754 Brassica carinata HOM05D004977 ORTHO05D006454 2.3e-53 213.0 137 79.6
CAN.G160.14 Capsicum annuum HOM05D004977 ORTHO05D006454 2.3e-53 213.0 129 82.9
Glyma.06G308700 Glycine max HOM05D004977 ORTHO05D006454 3.9e-53 212.2 152 71.7
Manes.04G055000 Manihot esculenta HOM05D004977 ORTHO05D006454 3.9e-53 212.2 184 70.7
Cc01_g07900 Coffea canephora HOM05D004977 ORTHO05D006454 6.6e-53 211.5 164 70.7
Glyma.12G096100 Glycine max HOM05D004977 ORTHO05D006454 1.1e-52 210.7 135 79.3
MSTRG.21003 Avicennia marina HOM05D004977 ORTHO05D006454 1.5e-52 210.3 178 70.2
AUR62003055 Chenopodium quinoa HOM05D004977 ORTHO05D006454 1.5e-52 210.3 134 78.4
AUR62007869 Chenopodium quinoa HOM05D004977 ORTHO05D006454 1.5e-52 210.3 135 77.0
RcHm_v2.0_Chr5g0051061 Rosa chinensis HOM05D004977 ORTHO05D006454 2.5e-52 209.5 196 68.4
Cpa.g.sc103.53 Carica papaya HOM05D004977 ORTHO05D006454 3.3e-52 209.1 135 78.5
Nitab4.5_0003551g0050 Nicotiana tabacum HOM05D004977 ORTHO05D006454 3.3e-52 209.1 139 77.7
FAN25G0235 Fragaria x ananassa HOM05D004977 ORTHO05D006454 5.6e-52 208.4 185 70.8
Hund25154 Selenicereus undatus HOM05D004977 ORTHO05D006454 5.6e-52 208.4 199 66.3
Solyc07g005880.3 Solanum lycopersicum HOM05D004977 ORTHO05D006454 9.5e-52 207.6 140 77.1
Duzib114G0826 Durio zibethinus HOM05D004977 ORTHO05D006454 1.2e-51 207.2 146 78.1
FAN16G1264 Fragaria x ananassa HOM05D004977 ORTHO05D006454 1.2e-51 207.2 184 70.7
Nitab4.5_0002611g0110 Nicotiana tabacum HOM05D004977 ORTHO05D006454 1.6e-51 206.8 114 88.6
Sopen07g001990 Solanum pennellii HOM05D004977 ORTHO05D006454 2.1e-51 206.5 188 66.5
Sed0002287 Sechium edule HOM05D004977 ORTHO05D006454 4.7e-51 205.3 140 75.7
FAN21G3176 Fragaria x ananassa HOM05D004977 ORTHO05D006454 8.1e-51 204.5 185 69.7
unitig_699.g19732 Utricularia gibba HOM05D004977 ORTHO05D006454 8.1e-51 204.5 170 73.5
PSO384G3330 Papaver somniferum HOM05D004977 ORTHO05D006454 1.8e-50 203.4 178 71.9
ClCG02G022520 Citrullus lanatus HOM05D004977 ORTHO05D006454 2.3e-50 203.0 174 75.3
Thecc.10G121800 Theobroma cacao HOM05D004977 ORTHO05D006454 5.2e-50 201.8 114 86.0
HPP92_002246 Vanilla planifolia HOM05D004977 ORTHO05D006454 1.5e-49 200.3 178 72.5
CDE05G0645 Ceratophyllum demersum HOM05D004977 ORTHO05D006454 2.0e-49 199.9 119 80.7
PSO339G5000 Papaver somniferum HOM05D004977 ORTHO05D006454 2.6e-49 199.5 131 78.6
FAN11G1922 Fragaria x ananassa HOM05D004977 ORTHO05D006454 3.4e-49 199.1 185 68.6
Ah.02g126710 Amaranthus hybridus HOM05D001549 ORTHO05D003098 5.8e-49 198.4 134 75.4
Lsat_1_v5_gn_4_27921 Lactuca sativa HOM05D004977 ORTHO05D006454 3.8e-48 195.7 130 77.7
Os11g0572100 Oryza sativa ssp. japonica HOM05D004977 ORTHO05D006454 2.4e-47 193.0 135 72.6
arahy.Tifrunner.gnm1.ann1.78MUYP Arachis hypogaea HOM05D004977 ORTHO05D006454 4.1e-47 192.2 162 65.4
COL.COLO4_16322 Corchorus olitorius HOM05D004977 ORTHO05D006454 5.4e-47 191.8 149 75.8
MD02G1244300 Malus domestica HOM05D004977 ORTHO05D006454 1.6e-46 190.3 152 71.7
Zm00001eb114240 Zea mays HOM05D004977 ORTHO05D006454 1.7e-45 186.8 136 68.4
Sp6g23180 Schrenkiella parvula HOM05D004977 ORTHO05D006454 2.3e-45 186.4 182 67.6
SHI47216 Sapria himalayana HOM05D004977 ORTHO05D006454 1.5e-44 183.7 175 66.9
ATR0697G081 Amborella trichopoda HOM05D004977 ORTHO05D006454 2.1e-43 179.9 185 61.6
BraA02t05635Z Brassica rapa HOM05D004977 ORTHO05D006454 1.4e-42 177.2 120 77.5
Sabra04G0149200 Salix brachista HOM05D004977 ORTHO05D006454 4.0e-42 175.6 204 56.4
arahy.Tifrunner.gnm1.ann1.7R5ZBL Arachis hypogaea HOM05D004977 ORTHO05D006454 1.5e-41 173.7 119 76.5
Ca_19486_v3 Cicer arietinum L. HOM05D004977 ORTHO05D006454 4.4e-41 172.2 126 72.2
BcaC07g41303 Brassica carinata HOM05D004977 ORTHO05D006454 9.9e-41 171.0 189 55.0
Pp3c22_21030 Physcomitrium patens HOM05D004977 ORTHO05D006454 3.5e-38 162.5 130 63.1
CBR_g31434 Chara braunii HOM05D004977 ORTHO05D006454 5.1e-37 158.7 111 73.9
Dinv21726 Davidia involucrata HOM05D004977 ORTHO05D006454 5.1e-37 158.7 78 92.3
CBR_g36402 Chara braunii HOM05D004977 ORTHO05D006454 2.1e-35 153.3 120 65.8
Actinidia37641 Actinidia chinensis HOM05D004977 ORTHO05D006454 2.8e-35 152.9 130 65.4
Mapoly0030s0061 Marchantia polymorpha HOM05D004977 ORTHO05D006454 9.9e-33 144.4 130 60.8
BolC8t51866H Brassica oleracea HOM05D004977 ORTHO05D006454 4.9e-32 142.1 131 61.8
AagrBONN_evm.TU.Sc2ySwM_228.4379 Anthoceros agrestis HOM05D004977 ORTHO05D006454 2.4e-31 139.8 109 68.8
TAR369G0311 Trochodendron aralioides HOM05D004977 ORTHO05D006454 5.1e-29 132.1 138 55.8
C08p43100 Brassica napus HOM05D004977 ORTHO05D006454 2.8e-27 126.3 122 59.8
Cre12.g521200 Chlamydomonas reinhardtii HOM05D004977 ORTHO05D006454 4.5e-25 119.0 92 64.1
MCO16G356 Micromonas commoda HOM05D004977 ORTHO05D006454 4.2e-23 112.5 94 57.4
EL10Ac6g14670 Beta vulgaris HOM05D004977 ORTHO05D006454 6.0e-22 108.6 134 47.0
TAR369G0757 Trochodendron aralioides HOM05D004977 ORTHO05D000293 1.9e-20 103.6 124 51.6
Atru.chr7.2567 Acer truncatum HOM05D004977 ORTHO05D006454 1.0e-16 91.3 87 65.5
Cfa025270 Carpinus fangiana HOM05D004977 ORTHO05D006454 2.7e-14 83.2 109 39.4
vmacro14316 Vaccinium macrocarpon HOM05D004977 ORTHO05D006454 3.7e-11 72.8 37 81.1
Pp3s32_280 Physcomitrium patens HOM05D020685 ORTHO05D022318 6.9e-10 68.6 80 46.2
PRCOL_00006813 Prasinoderma coloniale HOM05D004977 ORTHO05D006454 2.0e-09 67.0 101 43.6
CBR_g23346 Chara braunii HOM05D020685 ORTHO05D022318 2.9e-08 63.2 85 36.5


User provided reference genes

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