Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1g0008618 Lotus japonicus HOM05D008234 ORTHO05D010422 1.3e-235 819.3 419 100.0
Ca_12814_v3 Cicer arietinum L. HOM05D008234 ORTHO05D010422 4.4e-162 575.1 397 74.6
TPR.G12012 Trifolium pratense HOM05D008234 ORTHO05D010422 1.3e-153 547.0 424 69.8
Glyma.14G141400 Glycine max HOM05D008234 ORTHO05D010422 1.9e-136 490.0 425 63.3
Medtr1g008360 Medicago truncatula HOM05D008234 ORTHO05D010422 1.9e-133 479.9 420 63.8
Psat6g034200 Pisum sativum HOM05D008234 ORTHO05D010422 6.7e-126 454.9 423 60.0
Phvul.001G078800 Phaseolus vulgaris HOM05D008234 ORTHO05D010422 3.7e-124 449.1 422 60.2
Dinv14224 Davidia involucrata HOM05D008234 ORTHO05D010422 9.0e-123 444.5 424 56.6
Psat6g034160 Pisum sativum HOM05D008234 ORTHO05D010422 2.8e-108 396.4 407 57.5
Prupe.1G453000 Prunus persica HOM05D008234 ORTHO05D010422 1.1e-107 394.4 385 54.5
Actinidia31219 Actinidia chinensis HOM05D008234 ORTHO05D010422 3.8e-105 386.0 384 51.6
TWI34G1157 Tripterygium wilfordii HOM05D008234 ORTHO05D010422 1.3e-102 377.5 392 51.8
QL12p026340 Quercus lobata HOM05D008234 ORTHO05D010422 5.7e-101 372.1 424 52.8
Lj7P707T11 Lonicera japonica HOM05D008234 ORTHO05D010422 1.4e-96 357.5 334 54.5
Aqoxy7G03839 Aquilegia oxysepala HOM05D008234 ORTHO05D010422 2.5e-96 356.7 422 47.4
MSTRG.25893 Avicennia marina HOM05D008234 ORTHO05D010422 4.2e-96 355.9 383 49.6
RcHm_v2.0_Chr6g0305711 Rosa chinensis HOM05D008234 ORTHO05D010422 6.1e-95 352.1 380 52.4
Hma1.2p1_1255F.1_g270650 Hydrangea macrophylla HOM05D008234 ORTHO05D010422 7.9e-95 351.7 331 54.7
Lsat_1_v5_gn_6_11021 Lactuca sativa HOM05D008234 ORTHO05D010422 1.8e-94 350.5 375 48.0
Ah.16g105160 Amaranthus hybridus HOM05D008234 ORTHO05D010422 8.8e-94 348.2 392 47.7
TAR626G1903 Trochodendron aralioides HOM05D008234 ORTHO05D010422 1.1e-93 347.8 420 47.6
FAN20G2600 Fragaria x ananassa HOM05D008234 ORTHO05D010422 7.4e-93 345.1 378 50.5
CiPaw.08G023300 Carya illinoinensis HOM05D008234 ORTHO05D010422 2.4e-91 340.1 385 51.7
CDE04G1659 Ceratophyllum demersum HOM05D008234 ORTHO05D010422 5.9e-90 335.5 381 49.3
Sabra06G0190100 Salix brachista HOM05D008234 ORTHO05D010422 7.2e-88 328.6 404 46.3
SGA_v2.0_scaffold185G40113 Striga asiatica HOM05D008234 ORTHO05D010422 2.7e-87 326.6 383 44.4
Cc08_g08970 Coffea canephora HOM05D008234 ORTHO05D010422 1.1e-85 321.2 386 46.6
HanXRQChr02g0048071 Helianthus annuus HOM05D008234 ORTHO05D010422 4.4e-85 319.3 377 46.2
SalBow4G0332 Salvia bowleyana HOM05D008234 ORTHO05D010422 1.1e-83 314.7 385 46.2
Migut.A00244 Erythranthe guttata HOM05D008234 ORTHO05D010422 5.3e-83 312.4 382 44.0
Manes.03G062500 Manihot esculenta HOM05D008234 ORTHO05D010422 4.2e-80 302.8 420 43.3
AUR62023021 Chenopodium quinoa HOM05D008234 ORTHO05D010422 7.5e-77 292.0 418 40.7
FAN15G0125 Fragaria x ananassa HOM05D008234 ORTHO05D010422 7.5e-77 292.0 362 47.5
MD08G1118800 Malus domestica HOM05D008234 ORTHO05D010422 1.8e-75 287.3 380 46.3
Hund19548 Selenicereus undatus HOM05D008234 ORTHO05D010422 2.4e-75 287.0 392 41.8
FvH4_2g36160 Fragaria vesca HOM05D008234 ORTHO05D010422 7.0e-75 285.4 361 47.1
GSVIVG01035674001 Vitis vinifera HOM05D008234 ORTHO05D010422 2.7e-74 283.5 419 42.0
Ciclev10008407m.g Citrus clementina HOM05D008234 ORTHO05D010422 1.7e-73 280.8 420 43.3
Os03g0159700 Oryza sativa ssp. japonica HOM05D008234 ORTHO05D010422 2.2e-73 280.4 387 40.1
Duzib068G0878 Durio zibethinus HOM05D008234 ORTHO05D010422 1.9e-72 277.3 424 41.0
Thecc.03G110200 Theobroma cacao HOM05D008234 ORTHO05D010422 3.2e-72 276.6 387 42.6
Gohir.A03G071900 Gossypium hirsutum HOM05D008234 ORTHO05D010422 9.4e-72 275.0 324 46.9
Potri.006G243000 Populus trichocarpa HOM05D008234 ORTHO05D010422 1.6e-71 274.2 429 40.3
CSS0041765 Camellia sinensis var. sinensis HOM05D008234 ORTHO05D010422 1.4e-70 271.2 394 40.9
Zm00001eb004480 Zea mays HOM05D008234 ORTHO05D010422 4.4e-69 266.2 385 38.7
HPP92_009609 Vanilla planifolia HOM05D008234 ORTHO05D010422 5.7e-69 265.8 343 43.4
ECA233G2242 Erigeron canadensis HOM05D008234 ORTHO05D010422 3.1e-67 260.0 275 48.7
Cfa013340 Carpinus fangiana HOM05D001758 ORTHO05D005969 7.0e-67 258.8 367 43.6
COL.COLO4_28841 Corchorus olitorius HOM05D008234 ORTHO05D010422 8.0e-63 245.4 371 40.7
EL10Ac2g04079 Beta vulgaris HOM05D008234 ORTHO05D010422 4.0e-62 243.0 447 36.7
AUR62009335 Chenopodium quinoa HOM05D008234 ORTHO05D010422 6.8e-62 242.3 291 44.0
Haze_21845 Corylus avellana HOM05D008234 ORTHO05D010422 6.3e-60 235.7 332 44.3
MELO3C003586.2 Cucumis melo HOM05D008234 ORTHO05D010422 6.3e-60 235.7 291 46.0
CsaV3_3G047390 Cucumis sativus L. HOM05D008234 ORTHO05D010422 3.1e-59 233.4 291 45.0
ATR0697G092 Amborella trichopoda HOM05D008234 ORTHO05D010422 1.7e-57 227.6 380 38.2
Oeu011264.1 Olea europaea HOM05D008234 ORTHO05D010422 3.3e-56 223.4 300 41.3
Gorai.003G103400 Gossypium raimondii HOM05D008234 ORTHO05D001322 2.0e-53 214.2 286 45.1
unitig_27.g25079 Utricularia gibba HOM05D006621 ORTHO05D008425 1.1e-51 208.4 380 35.5
Nn2g11729 Nelumbo nucifera HOM05D008234 ORTHO05D010422 1.9e-51 207.6 422 33.9
ClCG11G014000 Citrullus lanatus HOM05D008234 ORTHO05D010422 9.2e-51 205.3 272 42.6
Gohir.D03G098600 Gossypium hirsutum HOM05D008234 ORTHO05D010422 4.3e-40 169.9 205 50.7
Gohir.D03G098650 Gossypium hirsutum HOM05D008234 ORTHO05D010422 7.3e-40 169.1 138 60.9
SEGI_11609 Sequoiadendron giganteum HOM05D008234 ORTHO05D010422 1.2e-34 151.8 252 35.3
Hma1.2p1_1434F.1_g283110 Hydrangea macrophylla HOM05D008234 ORTHO05D010422 3.9e-17 93.6 86 48.8
Sed0021692 Sechium edule HOM05D008234 ORTHO05D010422 9.0e-14 82.4 93 46.2
AagrBONN_evm.TU.Sc2ySwM_369.313 Anthoceros agrestis HOM05D005775 ORTHO05D000023 1.9e-08 64.7 402 21.6
CDE02G3715 Ceratophyllum demersum HOM05D002444 ORTHO05D009235 1.9e-08 64.7 235 23.8
ClCG00G003600 Citrullus lanatus HOM05D005775 ORTHO05D000023 3.3e-08 63.9 317 22.1
Psat7g051760 Pisum sativum HOM05D006414 ORTHO05D007780 5.6e-08 63.2 98 37.8
Ca_17703_v3 Cicer arietinum L. HOM05D006414 ORTHO05D007780 9.6e-08 62.4 98 37.8
FAN15G2002 Fragaria x ananassa HOM05D000001 ORTHO05D000003 9.6e-08 62.4 135 30.4
FAN27G0423 Fragaria x ananassa HOM05D000001 ORTHO05D000003 9.6e-08 62.4 135 29.6
ClCG00G000230 Citrullus lanatus HOM05D005775 ORTHO05D000023 1.3e-07 62.0 194 24.7
Medtr8g091670 Medicago truncatula HOM05D006414 ORTHO05D007780 1.3e-07 62.0 98 36.7
FAN20G1863 Fragaria x ananassa HOM05D000001 ORTHO05D000003 2.8e-07 60.8 135 29.6
SalBow8G0663 Salvia bowleyana HOM05D000608 ORTHO05D007780 2.8e-07 60.8 102 36.3
SalBow8G2565 Salvia bowleyana HOM05D000608 ORTHO05D007780 2.8e-07 60.8 102 36.3
Lj4g0018166 Lotus japonicus HOM05D006414 ORTHO05D007780 3.7e-07 60.5 96 37.5
PGR004G0335 Punica granatum HOM05D006414 ORTHO05D007780 3.7e-07 60.5 127 32.3
Aqoxy5G00981 Aquilegia oxysepala HOM05D006414 ORTHO05D007780 4.8e-07 60.1 102 34.3
Aqoxy6G00504 Aquilegia oxysepala HOM05D006414 ORTHO05D007780 4.8e-07 60.1 102 34.3
RcHm_v2.0_Chr6g0307911 Rosa chinensis HOM05D000001 ORTHO05D000003 4.8e-07 60.1 133 27.1
ATR0487G016 Amborella trichopoda HOM05D005775 ORTHO05D000023 6.2e-07 59.7 316 20.9
ClCG01G019140 Citrullus lanatus HOM05D006414 ORTHO05D007780 6.2e-07 59.7 98 34.7
Migut.H02413 Erythranthe guttata HOM05D006414 ORTHO05D007780 6.2e-07 59.7 98 35.7
Nitab4.5_0002133g0010 Nicotiana tabacum HOM05D006414 ORTHO05D007780 6.2e-07 59.7 130 33.8
SalBow6G5148 Salvia bowleyana HOM05D006414 ORTHO05D007780 6.2e-07 59.7 102 35.3
SalBow6G2882 Salvia bowleyana HOM05D006414 ORTHO05D007780 8.1e-07 59.3 102 35.3
SalBow6G7209 Salvia bowleyana HOM05D006414 ORTHO05D007780 8.1e-07 59.3 102 35.3
CsaV3_6G045830 Cucumis sativus L. HOM05D006414 ORTHO05D007780 1.1e-06 58.9 98 34.7
Lalb_Chr07g0184891 Lupinus albus HOM05D006414 ORTHO05D007780 1.1e-06 58.9 98 34.7
Sc03g0004230 Simmondsia chinensis HOM05D006414 ORTHO05D007780 1.1e-06 58.9 98 33.7
Nn1g05205 Nelumbo nucifera HOM05D006414 ORTHO05D007780 1.4e-06 58.5 102 34.3
TPR.G2171 Trifolium pratense HOM05D006414 ORTHO05D007780 1.8e-06 58.2 98 35.7
CDE10G1362 Ceratophyllum demersum HOM05D006414 ORTHO05D007780 2.4e-06 57.8 108 31.5
TAR376G1012 Trochodendron aralioides HOM05D006414 ORTHO05D007780 2.4e-06 57.8 98 33.7
Oeu028531.1 Olea europaea HOM05D006414 ORTHO05D007780 3.1e-06 57.4 98 34.7
Carub.0007s0149 Capsella rubella HOM05D006414 ORTHO05D007780 4.0e-06 57.0 123 33.3
CDE10G0169 Ceratophyllum demersum HOM05D006414 ORTHO05D007780 4.0e-06 57.0 102 32.4
COL.COLO4_11035 Corchorus olitorius HOM05D006414 ORTHO05D007780 4.0e-06 57.0 102 34.3
Duzib147G0014 Durio zibethinus HOM05D006414 ORTHO05D007780 4.0e-06 57.0 123 34.1
FvH4_2g34460 Fragaria vesca HOM05D000001 ORTHO05D000003 4.0e-06 57.0 135 28.9
LjContig00222g0010720 Lotus japonicus HOM05D005862 ORTHO05D007731 4.0e-06 57.0 126 32.5
Rhsim08G0008000 Rhododendron simsii HOM05D006414 ORTHO05D007780 4.0e-06 57.0 126 28.6
Aa31LG6G15650 Aethionema arabicum HOM05D006414 ORTHO05D007780 5.3e-06 56.6 119 33.6
AagrBONN_evm.TU.Sc2ySwM_117.2859 Anthoceros agrestis HOM05D000001 ORTHO05D000003 5.3e-06 56.6 183 21.9
Glyma.05G182700 Glycine max HOM05D006414 ORTHO05D007780 5.3e-06 56.6 98 32.7
Glyma.08G140300 Glycine max HOM05D006414 ORTHO05D007780 5.3e-06 56.6 98 32.7
Gorai.011G111900 Gossypium raimondii HOM05D006414 ORTHO05D007780 5.3e-06 56.6 102 34.3
Thecc.01G110400 Theobroma cacao HOM05D006414 ORTHO05D007780 5.3e-06 56.6 102 34.3
vmacro18623 Vaccinium macrocarpon HOM05D006414 ORTHO05D007780 5.3e-06 56.6 102 32.4
MSTRG.2541 Avicennia marina HOM05D006414 ORTHO05D007780 6.9e-06 56.2 102 33.3
BraA01t00058Z Brassica rapa HOM05D006414 ORTHO05D007780 6.9e-06 56.2 122 30.3
MELO3C007791.2 Cucumis melo HOM05D006414 ORTHO05D007780 6.9e-06 56.2 98 33.7
Gohir.D08G158800 Gossypium hirsutum HOM05D000104 ORTHO05D008354 6.9e-06 56.2 217 24.0
Potri.005G082400 Populus trichocarpa HOM05D006414 ORTHO05D007780 6.9e-06 56.2 102 34.3
GSVIVG01022204001 Vitis vinifera HOM05D006414 ORTHO05D007780 6.9e-06 56.2 102 32.4
Atru.chr4.307 Acer truncatum HOM05D006414 ORTHO05D007780 9.0e-06 55.8 102 33.3
CAN.G382.6 Capsicum annuum HOM05D006414 ORTHO05D007780 9.0e-06 55.8 98 32.7
Nitab4.5_0000156g0020 Nicotiana tabacum HOM05D006414 ORTHO05D007780 9.0e-06 55.8 98 32.7
PSO215G0001 Papaver somniferum HOM05D006414 ORTHO05D007780 9.0e-06 55.8 102 34.3
Peaxi162Scf01651g00012 Petunia axillaris HOM05D006414 ORTHO05D007780 9.0e-06 55.8 98 32.7
Solyc04g054270.4 Solanum lycopersicum HOM05D006414 ORTHO05D007780 9.0e-06 55.8 98 32.7
Sopen04g023860 Solanum pennellii HOM05D006414 ORTHO05D007780 9.0e-06 55.8 98 32.7
PGSC0003DMG400012802 Solanum tuberosum HOM05D006414 ORTHO05D007780 9.0e-06 55.8 98 32.7


User provided reference genes

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