Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1E1000G1 Lonicera japonica HOM05D002159 ORTHO05D017878 2.5e-33 144.8 72 100.0
HanXRQChr14g0462121 Helianthus annuus HOM05D002159 ORTHO05D005625 1.1e-31 139.4 72 95.8
Hma1.2p1_1604F.1_g293320 Hydrangea macrophylla HOM05D002159 ORTHO05D005625 1.2e-30 136.0 72 91.7
CSS0008751 Camellia sinensis var. sinensis HOM05D002159 ORTHO05D005625 2.0e-30 135.2 72 90.3
CSS0044503 Camellia sinensis var. sinensis HOM05D002159 ORTHO05D005625 2.0e-30 135.2 72 90.3
Dinv28421 Davidia involucrata HOM05D002159 ORTHO05D005625 7.6e-30 133.3 72 87.5
Cc02_g02790 Coffea canephora HOM05D002159 ORTHO05D005625 1.3e-29 132.5 71 87.3
Actinidia25881 Actinidia chinensis HOM05D002159 ORTHO05D005625 4.9e-29 130.6 72 87.5
ECA238G4262 Erigeron canadensis HOM05D002159 ORTHO05D005625 4.9e-29 130.6 72 88.9
Lsat_1_v5_gn_2_132660 Lactuca sativa HOM05D002159 ORTHO05D005625 4.9e-29 130.6 68 92.6
Nitab4.5_0000084g0030 Nicotiana tabacum HOM05D002159 ORTHO05D005625 1.4e-28 129.0 72 86.1
GSVIVG01028919001 Vitis vinifera HOM05D002159 ORTHO05D005625 1.4e-28 129.0 72 87.5
Solyc03g025540.3 Solanum lycopersicum HOM05D002159 ORTHO05D005625 1.9e-28 128.6 72 86.1
Sopen03g004380 Solanum pennellii HOM05D002159 ORTHO05D005625 1.9e-28 128.6 72 86.1
vmacro06665 Vaccinium macrocarpon HOM05D002159 ORTHO05D005625 1.9e-28 128.6 72 84.7
CAN.G1175.3 Capsicum annuum HOM05D002159 ORTHO05D005625 7.1e-28 126.7 72 84.7
Rhsim03G0187300 Rhododendron simsii HOM05D002159 ORTHO05D005625 9.3e-28 126.3 72 83.3
PSO478G3748 Papaver somniferum HOM05D002159 ORTHO05D005625 1.2e-27 125.9 72 80.6
PSO782G0249 Papaver somniferum HOM05D002159 ORTHO05D005625 1.2e-27 125.9 72 80.6
TAR629G0581 Trochodendron aralioides HOM05D002159 ORTHO05D005625 1.2e-27 125.9 72 81.9
Peaxi162Scf00444g00532 Petunia axillaris HOM05D002159 ORTHO05D005625 1.6e-27 125.6 72 81.9
EL10Ac3g05612 Beta vulgaris HOM05D002159 ORTHO05D005625 2.1e-27 125.2 72 84.7
AUR62015961 Chenopodium quinoa HOM05D002159 ORTHO05D005625 2.1e-27 125.2 72 84.7
Hund04761 Selenicereus undatus HOM05D002159 ORTHO05D005625 2.1e-27 125.2 72 84.7
Nitab4.5_0004439g0160 Nicotiana tabacum HOM05D002159 ORTHO05D005625 3.5e-27 124.4 73 84.9
Potri.001G231800 Populus trichocarpa HOM05D002159 ORTHO05D005625 3.5e-27 124.4 72 81.9
DCAR_026334 Daucus carota HOM05D002159 ORTHO05D005625 4.6e-27 124.0 73 84.9
TWI34G0379 Tripterygium wilfordii HOM05D002159 ORTHO05D005625 4.6e-27 124.0 72 80.6
Actinidia34126 Actinidia chinensis HOM05D002159 ORTHO05D005625 6.0e-27 123.6 72 81.9
Lalb_Chr03g0034671 Lupinus albus HOM05D002159 ORTHO05D005625 6.0e-27 123.6 72 80.6
Manes.01G126800 Manihot esculenta HOM05D002159 ORTHO05D005625 6.0e-27 123.6 72 81.9
PGR142G0288 Punica granatum HOM05D002159 ORTHO05D005625 6.0e-27 123.6 72 80.6
QL09p013785 Quercus lobata HOM05D002159 ORTHO05D005625 7.9e-27 123.2 72 79.2
Sc13g0008820 Simmondsia chinensis HOM05D002159 ORTHO05D005625 1.0e-26 122.9 72 83.3
VMungo0464G2116 Vigna mungo HOM05D002159 ORTHO05D005625 1.3e-26 122.5 72 79.2
AUR62021167 Chenopodium quinoa HOM05D002159 ORTHO05D005625 1.8e-26 122.1 72 81.9
Eucgr.K00275 Eucalyptus grandis HOM05D002159 ORTHO05D005625 1.8e-26 122.1 72 79.2
Oeu028430.1 Olea europaea HOM05D002159 ORTHO05D005625 1.8e-26 122.1 72 76.4
MD01G1203600 Malus domestica HOM05D002159 ORTHO05D005625 2.3e-26 121.7 72 80.6
Glyma.09G136900 Glycine max HOM05D002159 ORTHO05D005625 3.0e-26 121.3 72 79.2
Glyma.16G182300 Glycine max HOM05D002159 ORTHO05D005625 3.0e-26 121.3 72 79.2
ClCG05G008140 Citrullus lanatus HOM05D002201 ORTHO05D005625 3.9e-26 120.9 72 81.9
MELO3C006919.2 Cucumis melo HOM05D002159 ORTHO05D005625 3.9e-26 120.9 72 81.9
CsaV3_3G017220 Cucumis sativus L. HOM05D002159 ORTHO05D005625 3.9e-26 120.9 72 81.9
Duzib084G0847 Durio zibethinus HOM05D002159 ORTHO05D005625 3.9e-26 120.9 72 80.6
Lj2g0019958 Lotus japonicus HOM05D002159 ORTHO05D005625 3.9e-26 120.9 72 77.8
Aqoxy7G00327 Aquilegia oxysepala HOM05D002159 ORTHO05D005625 5.1e-26 120.6 72 80.6
COL.COLO4_28055 Corchorus olitorius HOM05D002159 ORTHO05D017878 5.1e-26 120.6 72 77.8
Nn1g01521 Nelumbo nucifera HOM05D002159 ORTHO05D005625 6.7e-26 120.2 72 77.8
Phvul.004G114000 Phaseolus vulgaris HOM05D002159 ORTHO05D005625 6.7e-26 120.2 72 77.8
Prupe.2G296200 Prunus persica HOM05D002159 ORTHO05D005625 8.7e-26 119.8 72 79.2
CiPaw.03G108100 Carya illinoinensis HOM05D002159 ORTHO05D005625 1.1e-25 119.4 72 79.2
Gohir.A12G256700 Gossypium hirsutum HOM05D002159 ORTHO05D005625 1.1e-25 119.4 72 79.2
Gohir.D12G258000 Gossypium hirsutum HOM05D002159 ORTHO05D005625 1.1e-25 119.4 72 79.2
Gorai.008G276300 Gossypium raimondii HOM05D002159 ORTHO05D005625 1.1e-25 119.4 72 79.2
Thecc.03G179100 Theobroma cacao HOM05D002159 ORTHO05D005625 1.1e-25 119.4 72 77.8
Glyma.11G170601 Glycine max HOM05D002159 ORTHO05D005625 1.5e-25 119.0 72 77.8
Duzib205G0713 Durio zibethinus HOM05D002159 ORTHO05D005625 1.9e-25 118.6 72 79.2
MD07G1272900 Malus domestica HOM05D002159 ORTHO05D005625 1.9e-25 118.6 72 77.8
SGA_v2.0_scaffold10G05332 Striga asiatica HOM05D002159 ORTHO05D005625 3.3e-25 117.9 73 78.1
Migut.F01111 Erythranthe guttata HOM05D002159 ORTHO05D005625 4.3e-25 117.5 72 80.6
Sed0009742 Sechium edule HOM05D002159 ORTHO05D005625 5.7e-25 117.1 72 79.2
HPP92_025730 Vanilla planifolia HOM05D002159 ORTHO05D005625 5.7e-25 117.1 72 79.2
Ca_14555_v3 Cicer arietinum L. HOM05D002159 ORTHO05D005625 1.6e-24 115.5 72 73.6
Medtr1g050492 Medicago truncatula HOM05D002159 ORTHO05D005625 1.6e-24 115.5 72 73.6
RcHm_v2.0_Chr1g0377681 Rosa chinensis HOM05D002159 ORTHO05D005625 1.6e-24 115.5 72 76.4
TPR.G8152 Trifolium pratense HOM05D002159 ORTHO05D005625 1.6e-24 115.5 72 73.6
Ciclev10004414m.g Citrus clementina HOM05D002159 ORTHO05D005625 3.7e-24 114.4 72 76.4
FvH4_7g29660 Fragaria vesca HOM05D002159 ORTHO05D005625 3.7e-24 114.4 72 75.0
FAN03G0857 Fragaria x ananassa HOM05D002159 ORTHO05D005625 3.7e-24 114.4 72 75.0
FAN03G1172 Fragaria x ananassa HOM05D002159 ORTHO05D005625 3.7e-24 114.4 72 75.0
FAN06G3579 Fragaria x ananassa HOM05D002159 ORTHO05D005625 3.7e-24 114.4 72 75.0
FAN06G4426 Fragaria x ananassa HOM05D002159 ORTHO05D005625 3.7e-24 114.4 72 75.0
CDE06G0059 Ceratophyllum demersum HOM05D002159 ORTHO05D005625 4.8e-24 114.0 72 73.6
FAN10G0118 Fragaria x ananassa HOM05D002159 ORTHO05D005625 4.8e-24 114.0 72 75.0
Os09g0569400 Oryza sativa ssp. japonica HOM05D002159 ORTHO05D005625 6.2e-24 113.6 72 76.4
BcaNung05469 Brassica carinata HOM05D002159 ORTHO05D005625 8.2e-24 113.2 73 76.7
A06p34690 Brassica napus HOM05D002159 ORTHO05D005625 8.2e-24 113.2 73 76.7
C07p43800 Brassica napus HOM05D002159 ORTHO05D005625 8.2e-24 113.2 73 76.7
BolC7t44909H Brassica oleracea HOM05D002159 ORTHO05D005625 8.2e-24 113.2 73 76.7
BraA06t26396Z Brassica rapa HOM05D002159 ORTHO05D005625 8.2e-24 113.2 73 76.7
CANSAT21G0489 Cannabis sativa HOM05D002159 ORTHO05D005625 1.1e-23 112.8 73 76.7
AL6G35190 Arabidopsis lyrata HOM05D002159 ORTHO05D005625 1.4e-23 112.5 73 75.3
AT5G23880 Arabidopsis thaliana HOM05D002159 ORTHO05D005625 1.4e-23 112.5 73 75.3
Carub.0006s2160 Capsella rubella HOM05D002159 ORTHO05D005625 1.4e-23 112.5 73 75.3
Thhalv10003707m.g Eutrema salsugineum HOM05D002159 ORTHO05D005625 1.4e-23 112.5 73 75.3
Sp2g23400 Schrenkiella parvula HOM05D002159 ORTHO05D005625 1.4e-23 112.5 73 75.3
THA.LOC104821393 Tarenaya hassleriana HOM05D002159 ORTHO05D005625 1.4e-23 112.5 73 75.3
BcaNung05470 Brassica carinata HOM05D002159 ORTHO05D005625 1.8e-23 112.1 73 75.3
CARHR189680 Cardamine hirsuta HOM05D002159 ORTHO05D005625 1.8e-23 112.1 73 74.0
Lj8C239G4 Lonicera japonica HOM05D002159 ORTHO05D005625 3.1e-23 111.3 60 91.7
MELO3C035667.2 Cucumis melo HOM05D002159 ORTHO05D017878 9.0e-23 109.8 72 73.6
Atru.chr1.430 Acer truncatum HOM05D002159 ORTHO05D005625 1.2e-22 109.4 71 74.6
FAN01G0872 Fragaria x ananassa HOM05D002159 ORTHO05D005625 3.4e-22 107.8 78 69.2
Haze_13669 Corylus avellana HOM05D002159 ORTHO05D005625 5.8e-22 107.1 61 83.6
arahy.Tifrunner.gnm1.ann1.F9YRCX Arachis hypogaea HOM05D002159 ORTHO05D005625 1.0e-21 106.3 72 73.6
Sabra16G0139100 Salix brachista HOM05D002159 ORTHO05D005625 6.5e-21 103.6 61 78.7
Zm00001eb162800 Zea mays HOM05D002159 ORTHO05D005625 4.2e-20 100.9 72 69.4
Cfa023191 Carpinus fangiana HOM05D002159 ORTHO05D005625 5.5e-20 100.5 55 87.3
MD01G1203700 Malus domestica HOM05D000507 ORTHO05D000416 1.8e-18 95.5 58 79.3
Aa31LG11G3180 Aethionema arabicum HOM05D002159 ORTHO05D005625 3.9e-18 94.4 102 51.0
ATR0680G292 Amborella trichopoda HOM05D002159 ORTHO05D005625 6.7e-18 93.6 72 66.7
Cpa.g.c26789.4 Carica papaya HOM05D002159 ORTHO05D005625 4.8e-16 87.4 51 80.4
FvH4_7g30021 Fragaria vesca HOM05D002159 ORTHO05D017878 6.3e-16 87.0 59 71.2
FAN06G3485 Fragaria x ananassa HOM05D002159 ORTHO05D017878 6.3e-16 87.0 59 71.2
Mapoly0007s0176 Marchantia polymorpha HOM05D002159 ORTHO05D005625 1.1e-15 86.3 72 61.1
MELO3C033916.2 Cucumis melo HOM05D002159 ORTHO05D017878 1.4e-15 85.9 63 68.3
SEGI_18447 Sequoiadendron giganteum HOM05D002159 ORTHO05D017878 1.8e-15 85.5 61 70.5
Pp3c9_11100 Physcomitrium patens HOM05D002159 ORTHO05D005625 9.0e-15 83.2 72 58.3
HPP92_025733 Vanilla planifolia HOM05D002159 ORTHO05D005625 9.0e-15 83.2 51 78.4
RcHm_v2.0_Chr1g0379161 Rosa chinensis HOM05D002159 ORTHO05D005625 2.0e-14 82.0 75 60.0
AagrBONN_evm.TU.Sc2ySwM_117.3689 Anthoceros agrestis HOM05D002159 ORTHO05D005625 2.2e-13 78.6 70 54.3
SalBow2G1087 Salvia bowleyana HOM05D002159 ORTHO05D005625 6.5e-13 77.0 41 87.8
SMO111G0062 Selaginella moellendorffii HOM05D002159 ORTHO05D005625 3.2e-12 74.7 70 52.9
DCAR_002643 Daucus carota HOM05D002159 ORTHO05D017878 1.2e-11 72.8 49 75.5
Ah.13g068620 Amaranthus hybridus HOM05D002159 ORTHO05D005625 2.7e-11 71.6 39 84.6
MELO3C034434.2 Cucumis melo HOM05D002159 ORTHO05D017878 1.8e-10 68.9 43 76.7
unitig_26.g10199 Utricularia gibba HOM05D002159 ORTHO05D005625 1.5e-09 65.9 40 70.0
BcaNung01838 Brassica carinata HOM05D002159 ORTHO05D005625 3.3e-09 64.7 40 77.5
FAN18G0300 Fragaria x ananassa HOM05D002159 ORTHO05D005625 5.7e-09 63.9 40 75.0
PRCOL_00000390 Prasinoderma coloniale HOM05D002159 ORTHO05D005625 7.7e-06 53.5 72 38.9


User provided reference genes

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