Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1C682G4 Lonicera japonica HOM05D006124 ORTHO05D007854 2.9e-179 631.7 306 100.0
Hma1.2p1_0002F.1_g001970 Hydrangea macrophylla HOM05D006124 ORTHO05D007854 5.7e-151 537.7 283 89.0
CSS0017090 Camellia sinensis var. sinensis HOM05D006124 ORTHO05D007854 1.3e-150 536.6 284 89.8
Dinv30520 Davidia involucrata HOM05D006124 ORTHO05D007854 2.2e-150 535.8 289 88.2
Cc01_g01430 Coffea canephora HOM05D006124 ORTHO05D007854 2.6e-148 528.9 283 89.0
Rhsim08G0043400 Rhododendron simsii HOM05D006124 ORTHO05D007854 1.0e-147 526.9 284 88.7
Actinidia07118 Actinidia chinensis HOM05D006124 ORTHO05D007854 2.2e-147 525.8 284 87.3
QL01p023235 Quercus lobata HOM05D006124 ORTHO05D007854 8.5e-147 523.9 289 85.1
Cfa012640 Carpinus fangiana HOM05D006124 ORTHO05D007854 4.2e-146 521.5 289 85.1
Nn7g36111 Nelumbo nucifera HOM05D006124 ORTHO05D007854 4.2e-146 521.5 279 87.5
DCAR_015555 Daucus carota HOM05D006124 ORTHO05D007854 2.1e-145 519.2 277 88.1
vmacro03179 Vaccinium macrocarpon HOM05D006124 ORTHO05D007854 2.1e-145 519.2 284 87.3
GSVIVG01025154001 Vitis vinifera HOM05D006124 ORTHO05D007854 2.7e-145 518.8 276 88.0
Haze_08019 Corylus avellana HOM05D006124 ORTHO05D007854 6.1e-145 517.7 296 83.1
Thecc.09G259100 Theobroma cacao HOM05D006124 ORTHO05D007854 1.4e-144 516.5 275 88.4
HanXRQChr02g0055911 Helianthus annuus HOM05D006124 ORTHO05D007854 1.8e-144 516.2 280 86.8
COL.COLO4_05187 Corchorus olitorius HOM05D006124 ORTHO05D007854 3.0e-144 515.4 276 87.3
CiPaw.13G108300 Carya illinoinensis HOM05D006124 ORTHO05D007854 5.2e-144 514.6 276 87.0
Nitab4.5_0000214g0090 Nicotiana tabacum HOM05D006124 ORTHO05D007854 5.2e-144 514.6 276 89.1
Duzib150G0641 Durio zibethinus HOM05D006124 ORTHO05D007854 1.5e-143 513.1 276 87.3
Eucgr.J00945 Eucalyptus grandis HOM05D006124 ORTHO05D007854 2.6e-143 512.3 275 89.1
Prupe.6G097100 Prunus persica HOM05D006124 ORTHO05D007854 3.3e-143 511.9 289 83.7
Lsat_1_v5_gn_6_46340 Lactuca sativa HOM05D006124 ORTHO05D007854 5.7e-143 511.1 276 87.0
CANSAT54G1697 Cannabis sativa HOM05D006124 ORTHO05D007854 9.7e-143 510.4 283 83.7
MD03G1112800 Malus domestica HOM05D006124 ORTHO05D007854 1.3e-142 510.0 289 83.0
Atru.chr3.3681 Acer truncatum HOM05D006124 ORTHO05D007854 2.2e-142 509.2 276 87.7
CAN.G219.5 Capsicum annuum HOM05D006124 ORTHO05D007854 2.8e-142 508.8 283 86.2
Peaxi162Scf00876g00022 Petunia axillaris HOM05D006124 ORTHO05D007854 2.8e-142 508.8 283 85.9
Solyc04g054700.3 Solanum lycopersicum HOM05D006124 ORTHO05D007854 1.4e-141 506.5 283 85.5
MBI18_g17017_MAGBIO Magnolia biondii HOM05D006124 ORTHO05D007854 2.4e-141 505.8 284 84.5
MELO3C005421.2 Cucumis melo HOM05D006124 ORTHO05D007854 5.3e-141 504.6 284 81.3
SalBow3G1513 Salvia bowleyana HOM05D006124 ORTHO05D007854 5.3e-141 504.6 277 86.3
MSTRG.21138 Avicennia marina HOM05D006124 ORTHO05D007854 7.0e-141 504.2 276 87.0
ECA233G1948 Erigeron canadensis HOM05D006124 ORTHO05D007854 7.0e-141 504.2 276 86.2
Aqoxy5G00340 Aquilegia oxysepala HOM05D006124 ORTHO05D007854 9.1e-141 503.8 277 85.2
Sopen04g024450 Solanum pennellii HOM05D006124 ORTHO05D007854 9.1e-141 503.8 283 85.5
Cpa.g.sc139.77 Carica papaya HOM05D006124 ORTHO05D007854 1.6e-140 503.1 283 84.8
Oeu035057.1 Olea europaea HOM05D006124 ORTHO05D007854 2.0e-140 502.7 276 86.6
Potri.004G113700 Populus trichocarpa HOM05D006124 ORTHO05D007854 2.0e-140 502.7 276 86.2
Peaxi162Scf00272g00827 Petunia axillaris HOM05D006124 ORTHO05D007854 2.7e-140 502.3 283 84.8
Sabra04G0071700 Salix brachista HOM05D006124 ORTHO05D007854 2.7e-140 502.3 276 85.9
Ciclev10005033m.g Citrus clementina HOM05D006124 ORTHO05D007854 3.5e-140 501.9 276 87.0
FAN25G1144 Fragaria x ananassa HOM05D006124 ORTHO05D007854 3.5e-140 501.9 289 82.4
RcHm_v2.0_Chr5g0060301 Rosa chinensis HOM05D006124 ORTHO05D007854 1.0e-139 500.4 289 82.7
ClCG01G004970 Citrullus lanatus HOM05D006124 ORTHO05D007854 1.3e-139 500.0 284 81.0
CsaV3_5G005370 Cucumis sativus L. HOM05D006124 ORTHO05D007854 1.7e-139 499.6 284 80.3
Nitab4.5_0004386g0010 Nicotiana tabacum HOM05D006124 ORTHO05D007854 1.7e-139 499.6 276 87.3
Ca_08379_v3 Cicer arietinum L. HOM05D006124 ORTHO05D007854 2.9e-139 498.8 288 81.6
Peaxi162Scf00876g00023 Petunia axillaris HOM05D006124 ORTHO05D007854 2.9e-139 498.8 296 82.1
THA.LOC104801004 Tarenaya hassleriana HOM05D006124 ORTHO05D007854 3.8e-139 498.4 283 83.7
TWI39G0794 Tripterygium wilfordii HOM05D006124 ORTHO05D007854 3.8e-139 498.4 282 84.8
AUR62021039 Chenopodium quinoa HOM05D006124 ORTHO05D007854 1.1e-138 496.9 284 82.0
Gohir.A09G106200 Gossypium hirsutum HOM05D006124 ORTHO05D007854 1.1e-138 496.9 283 82.7
Gorai.006G120700 Gossypium raimondii HOM05D006124 ORTHO05D007854 1.1e-138 496.9 283 82.7
FAN21G3497 Fragaria x ananassa HOM05D006124 ORTHO05D007854 1.5e-138 496.5 276 84.4
Medtr7g089440 Medicago truncatula HOM05D006124 ORTHO05D007854 1.9e-138 496.1 275 82.5
Gohir.D09G102900 Gossypium hirsutum HOM05D006124 ORTHO05D007854 4.2e-138 495.0 283 82.3
Manes.04G024500 Manihot esculenta HOM05D006124 ORTHO05D007854 4.2e-138 495.0 276 85.9
PSO384G4530 Papaver somniferum HOM05D006124 ORTHO05D007854 4.2e-138 495.0 288 80.6
Sc06g0010480 Simmondsia chinensis HOM05D006124 ORTHO05D007854 4.2e-138 495.0 276 83.3
TPR.G16093 Trifolium pratense HOM05D006124 ORTHO05D007854 4.2e-138 495.0 288 80.6
FvH4_3g32970 Fragaria vesca HOM05D006124 ORTHO05D007854 5.5e-138 494.6 289 81.0
Ah.13g077240 Amaranthus hybridus HOM05D006124 ORTHO05D007854 1.2e-137 493.4 276 83.0
FAN11G0357 Fragaria x ananassa HOM05D006124 ORTHO05D007854 1.2e-137 493.4 289 80.6
Sed0018571 Sechium edule HOM05D006124 ORTHO05D007854 1.6e-137 493.0 291 79.0
Glyma.19G129000 Glycine max HOM05D006124 ORTHO05D007854 2.7e-137 492.3 275 81.5
Lalb_Chr22g0357551 Lupinus albus HOM05D006124 ORTHO05D007854 2.7e-137 492.3 275 81.5
PSO541G0641 Papaver somniferum HOM05D006124 ORTHO05D007854 2.7e-137 492.3 288 79.9
PGR119G0371 Punica granatum HOM05D006124 ORTHO05D007854 4.7e-137 491.5 274 85.4
CiPaw.05G171100 Carya illinoinensis HOM05D006124 ORTHO05D007854 8.0e-137 490.7 288 80.9
Ciclev10011800m.g Citrus clementina HOM05D006124 ORTHO05D007854 8.0e-137 490.7 276 83.7
Migut.D02195 Erythranthe guttata HOM05D006124 ORTHO05D007854 8.0e-137 490.7 275 84.4
PSO339G3674 Papaver somniferum HOM05D006124 ORTHO05D007854 8.0e-137 490.7 288 79.9
AUR62018404 Chenopodium quinoa HOM05D006124 ORTHO05D007854 1.0e-136 490.3 275 84.0
Lj1g0025688 Lotus japonicus HOM05D006124 ORTHO05D007854 1.4e-136 490.0 275 81.5
EL10Ac5g12347 Beta vulgaris HOM05D006124 ORTHO05D007854 6.8e-136 487.6 276 81.9
TAR369G0666 Trochodendron aralioides HOM05D006124 ORTHO05D007854 8.8e-136 487.3 283 82.3
AT1G05055 Arabidopsis thaliana HOM05D006124 ORTHO05D007854 4.4e-135 485.0 284 81.3
arahy.Tifrunner.gnm1.ann1.63AZS3 Arachis hypogaea HOM05D006124 ORTHO05D007854 1.7e-134 483.0 275 81.1
arahy.Tifrunner.gnm1.ann1.M1WJK6 Arachis hypogaea HOM05D006124 ORTHO05D007854 1.7e-134 483.0 275 81.1
Glyma.11G073900 Glycine max HOM05D006124 ORTHO05D007854 1.7e-134 483.0 275 80.7
AL1G14800 Arabidopsis lyrata HOM05D006124 ORTHO05D007854 2.8e-134 482.3 284 81.0
Lalb_Chr14g0365721 Lupinus albus HOM05D006124 ORTHO05D007854 2.8e-134 482.3 275 80.7
Thhalv10007730m.g Eutrema salsugineum HOM05D006124 ORTHO05D007854 3.7e-134 481.9 276 82.6
Aa31LG1G19730 Aethionema arabicum HOM05D006124 ORTHO05D007854 6.3e-134 481.1 282 82.3
Sp1g03920 Schrenkiella parvula HOM05D006124 ORTHO05D007854 1.8e-133 479.6 283 81.3
SGA_v2.0_scaffold61G21160 Striga asiatica HOM05D006124 ORTHO05D007854 1.8e-133 479.6 303 76.9
BcaB03g13459 Brassica carinata HOM05D006124 ORTHO05D007854 4.1e-133 478.4 284 80.6
A08p36590 Brassica napus HOM05D006124 ORTHO05D007854 4.1e-133 478.4 283 80.6
BraA08t35561Z Brassica rapa HOM05D006124 ORTHO05D007854 4.1e-133 478.4 283 80.6
CARHR004500 Cardamine hirsuta HOM05D006124 ORTHO05D007854 5.4e-133 478.0 284 80.6
VMungo1383G3228 Vigna mungo HOM05D006124 ORTHO05D007854 5.4e-133 478.0 275 79.6
C08p01730 Brassica napus HOM05D006124 ORTHO05D007854 9.1e-133 477.2 284 80.3
BolC8t46973H Brassica oleracea HOM05D006124 ORTHO05D007854 9.1e-133 477.2 284 80.3
Psat3g079640 Pisum sativum HOM05D006124 ORTHO05D007854 1.5e-130 469.9 267 80.9
MD11G1132000 Malus domestica HOM05D006124 ORTHO05D007854 7.2e-130 467.6 285 78.2
Carub.0001s0430 Capsella rubella HOM05D006124 ORTHO05D007854 1.6e-129 466.5 283 78.4
unitig_21.g20322 Utricularia gibba HOM05D006124 ORTHO05D007854 2.1e-129 466.1 282 78.0
Phvul.001G121400 Phaseolus vulgaris HOM05D006124 ORTHO05D007854 6.1e-129 464.5 269 78.8
SEGI_32950 Sequoiadendron giganteum HOM05D006124 ORTHO05D007854 3.0e-128 462.2 276 76.8
CDE04G2680 Ceratophyllum demersum HOM05D006124 ORTHO05D007854 2.6e-127 459.1 263 82.9
Peaxi162Scf00106g02220 Petunia axillaris HOM05D006124 ORTHO05D007854 4.9e-126 454.9 280 80.4
ATR0580G285 Amborella trichopoda HOM05D006124 ORTHO05D007854 7.0e-125 451.1 283 74.2
Os04g0508900 Oryza sativa ssp. japonica HOM05D006124 ORTHO05D007854 1.3e-123 446.8 290 72.1
Zm00001eb077790 Zea mays HOM05D006124 ORTHO05D007854 3.8e-123 445.3 290 74.1
Mapoly0005s0033 Marchantia polymorpha HOM05D006124 ORTHO05D007854 1.9e-117 426.4 283 67.5
Pp3c24_6530 Physcomitrium patens HOM05D006124 ORTHO05D007854 1.2e-113 413.7 276 65.9
CAN.G1136.1 Capsicum annuum HOM05D006124 ORTHO05D007854 4.1e-109 398.7 256 75.8
AagrBONN_evm.TU.Sc2ySwM_344.4431 Anthoceros agrestis HOM05D006124 ORTHO05D007854 1.7e-107 393.3 275 64.0
CBR_g21234 Chara braunii HOM05D006124 ORTHO05D007854 3.1e-104 382.5 278 63.3
SMO141G0040 Selaginella moellendorffii HOM05D006124 ORTHO05D007854 3.1e-104 382.5 276 59.8
Solyc08g028693.1 Solanum lycopersicum HOM05D006124 ORTHO05D007854 3.1e-88 329.3 182 86.8
BolC5t29103H Brassica oleracea HOM05D006124 ORTHO05D007854 1.1e-80 304.3 241 66.0
Cre03.g179550 Chlamydomonas reinhardtii HOM05D006124 ORTHO05D007854 1.9e-77 293.5 292 46.6
MCO11G183 Micromonas commoda HOM05D006124 ORTHO05D007854 2.7e-68 263.1 292 46.2
PGSC0003DMG401027913 Solanum tuberosum HOM05D006124 ORTHO05D007854 1.8e-67 260.4 150 84.0
Lj1A187G25 Lonicera japonica HOM05D006124 ORTHO05D007854 4.2e-61 239.2 123 94.3
Haze_26481 Corylus avellana HOM05D006124 ORTHO05D007854 5.7e-58 228.8 281 42.3
PRCOL_00001395 Prasinoderma coloniale HOM05D006124 ORTHO05D007854 1.5e-55 220.7 250 44.4
Cfa026643 Carpinus fangiana HOM05D006124 ORTHO05D007854 6.5e-54 215.3 281 39.9
HPP92_015146 Vanilla planifolia HOM05D006124 ORTHO05D007854 1.2e-31 141.4 81 75.3
Psat6g235520 Pisum sativum HOM05D006124 ORTHO05D001516 2.2e-25 120.6 74 74.3
ClCG03G002310 Citrullus lanatus HOM05D006124 ORTHO05D150439 1.8e-16 90.9 133 40.6
ECA247G2464 Erigeron canadensis HOM05D011992 ORTHO05D008321 1.1e-13 81.6 88 53.4
RcHm_v2.0_Chr5g0060231 Rosa chinensis HOM05D006124 ORTHO05D007854 1.7e-09 67.8 45 71.1
ECA233G1860 Erigeron canadensis HOM05D000013 ORTHO05D000011 1.7e-06 57.8 95 41.1


User provided reference genes

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