Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr14g0367611 Lupinus albus HOM05D000917 ORTHO05D000764 3.4e-22 107.5 55 100.0
Lalb_Chr14g0367621 Lupinus albus HOM05D000917 ORTHO05D000764 3.4e-22 107.5 55 100.0
Lalb_Chr24g0398741 Lupinus albus HOM05D000917 ORTHO05D000764 2.7e-11 71.2 41 85.4
Lj4C796G5 Lonicera japonica HOM05D000917 ORTHO05D000764 1.1e-09 65.9 41 78.0
Potri.002G024100 Populus trichocarpa HOM05D000917 ORTHO05D000764 3.3e-09 64.3 41 78.0
arahy.Tifrunner.gnm1.ann1.IGC1S7 Arachis hypogaea HOM05D000917 ORTHO05D000764 4.3e-09 63.9 41 78.0
arahy.Tifrunner.gnm1.ann1.XF1QK2 Arachis hypogaea HOM05D000917 ORTHO05D000764 4.3e-09 63.9 41 78.0
Glyma.14G218000 Glycine max HOM05D000917 ORTHO05D000764 4.3e-09 63.9 41 78.0
Psat6g003680 Pisum sativum HOM05D000917 ORTHO05D000764 4.3e-09 63.9 41 73.2
TWI36G0418 Tripterygium wilfordii HOM05D000917 ORTHO05D000764 5.7e-09 63.5 42 73.8
Sc02g0008510 Simmondsia chinensis HOM05D000917 ORTHO05D000764 9.7e-09 62.8 41 75.6
Ah.05g168130 Amaranthus hybridus HOM05D000917 ORTHO05D000764 1.3e-08 62.4 41 75.6
Duzib041G0621 Durio zibethinus HOM05D000917 ORTHO05D000764 1.3e-08 62.4 41 73.2
Glyma.17G257100 Glycine max HOM05D000917 ORTHO05D000764 1.3e-08 62.4 41 75.6
Phvul.001G007900 Phaseolus vulgaris HOM05D000917 ORTHO05D000764 1.3e-08 62.4 41 75.6
Cfa013934 Carpinus fangiana HOM05D000917 ORTHO05D000764 1.6e-08 62.0 41 73.2
Haze_22617 Corylus avellana HOM05D000917 ORTHO05D000764 1.6e-08 62.0 41 73.2
Gohir.A05G257200 Gossypium hirsutum HOM05D000917 ORTHO05D000764 1.6e-08 62.0 41 73.2
Nitab4.5_0000192g0070 Nicotiana tabacum HOM05D000917 ORTHO05D000764 1.6e-08 62.0 41 70.7
Prupe.1G367600 Prunus persica HOM05D000917 ORTHO05D000764 1.6e-08 62.0 41 75.6
COL.COLO4_26164 Corchorus olitorius HOM05D000917 ORTHO05D000764 2.2e-08 61.6 41 73.2
CANSAT35G1375 Cannabis sativa HOM05D000917 ORTHO05D000764 2.8e-08 61.2 41 75.6
Lalb_Chr22g0354381 Lupinus albus HOM05D000917 ORTHO05D000764 2.8e-08 61.2 41 75.6
RcHm_v2.0_Chr6g0302611 Rosa chinensis HOM05D000917 ORTHO05D000764 2.8e-08 61.2 40 75.0
TAR625G1417 Trochodendron aralioides HOM05D000917 ORTHO05D000764 2.8e-08 61.2 41 70.7
VMungo0647G2420 Vigna mungo HOM05D000917 ORTHO05D000764 2.8e-08 61.2 41 73.2
Rhsim07G0246300 Rhododendron simsii HOM05D000917 ORTHO05D000764 3.7e-08 60.8 41 70.7
Gohir.D05G258700 Gossypium hirsutum HOM05D000917 ORTHO05D000764 4.8e-08 60.5 41 70.7
Gorai.009G270300 Gossypium raimondii HOM05D000917 ORTHO05D000764 4.8e-08 60.5 41 70.7
Ciclev10000087m.g Citrus clementina HOM05D000917 ORTHO05D000764 6.3e-08 60.1 41 73.2
Thecc.08G042300 Theobroma cacao HOM05D000917 ORTHO05D000764 6.3e-08 60.1 41 70.7
CiPaw.08G065200 Carya illinoinensis HOM05D000917 ORTHO05D000764 8.2e-08 59.7 41 73.2
AUR62026673 Chenopodium quinoa HOM05D000917 ORTHO05D000764 8.2e-08 59.7 41 73.2
FvH4_2g38700 Fragaria vesca HOM05D000917 ORTHO05D000764 8.2e-08 59.7 40 72.5
FAN15G1164 Fragaria x ananassa HOM05D000917 ORTHO05D000764 8.2e-08 59.7 40 72.5
FAN20G1441 Fragaria x ananassa HOM05D000917 ORTHO05D000764 8.2e-08 59.7 40 72.5
FAN27G3184 Fragaria x ananassa HOM05D000917 ORTHO05D000764 8.2e-08 59.7 40 72.5
VMungo0251G2960 Vigna mungo HOM05D000917 ORTHO05D000764 8.2e-08 59.7 41 73.2
GSVIVG01009879001 Vitis vinifera HOM05D000917 ORTHO05D000764 8.2e-08 59.7 41 70.7
EL10Ac1g01590 Beta vulgaris HOM05D000917 ORTHO05D000764 1.1e-07 59.3 41 70.7
Cc10_g01840 Coffea canephora HOM05D000917 ORTHO05D000764 1.1e-07 59.3 41 70.7
MD08G1014700 Malus domestica HOM05D000917 ORTHO05D000764 1.1e-07 59.3 41 73.2
QL02p011305 Quercus lobata HOM05D000917 ORTHO05D000764 1.1e-07 59.3 41 70.7
Hund05196 Selenicereus undatus HOM05D000917 ORTHO05D000764 1.1e-07 59.3 41 70.7
Nn6g32346 Nelumbo nucifera HOM05D000917 ORTHO05D000764 1.4e-07 58.9 41 68.3
SGA_v2.0_scaffold92G28246 Striga asiatica HOM05D000917 ORTHO05D000764 1.4e-07 58.9 41 70.7
CAN.G1925.7 Capsicum annuum HOM05D000917 ORTHO05D000764 1.8e-07 58.5 41 65.9
TWI56G1011 Tripterygium wilfordii HOM05D000917 ORTHO05D000764 1.8e-07 58.5 41 70.7
AUR62040580 Chenopodium quinoa HOM05D000917 ORTHO05D000764 2.4e-07 58.2 41 70.7
Eucgr.F01638 Eucalyptus grandis HOM05D000917 ORTHO05D000764 2.4e-07 58.2 41 68.3
Lj5g0016062 Lotus japonicus HOM05D000917 ORTHO05D000764 2.4e-07 58.2 41 73.2
Manes.05G149100 Manihot esculenta HOM05D000917 ORTHO05D000764 2.4e-07 58.2 41 68.3
Potri.005G237500 Populus trichocarpa HOM05D000917 ORTHO05D000764 2.4e-07 58.2 41 70.7
Sabra05G0183600 Salix brachista HOM05D000917 ORTHO05D000764 2.4e-07 58.2 41 70.7
CiPaw.07G151800 Carya illinoinensis HOM05D000917 ORTHO05D000764 3.1e-07 57.8 53 56.6
ECA246G2463 Erigeron canadensis HOM05D000917 ORTHO05D000764 3.1e-07 57.8 45 68.9
HanXRQChr12g0379411 Helianthus annuus HOM05D000917 ORTHO05D000764 3.1e-07 57.8 45 68.9
HanXRQChr15g0471811 Helianthus annuus HOM05D000917 ORTHO05D000764 3.1e-07 57.8 45 68.9
MD15G1014000 Malus domestica HOM05D000917 ORTHO05D000764 3.1e-07 57.8 41 70.7
PSO675G6048 Papaver somniferum HOM05D000917 ORTHO05D000764 3.1e-07 57.8 52 57.7
Peaxi162Scf00064g00065 Petunia axillaris HOM05D000917 ORTHO05D000764 3.1e-07 57.8 41 68.3
CAN.G311.9 Capsicum annuum HOM05D000917 ORTHO05D000764 4.1e-07 57.4 41 65.9
Peaxi162Scf00438g00049 Petunia axillaris HOM05D000917 ORTHO05D000764 4.1e-07 57.4 41 65.9
vmacro04341 Vaccinium macrocarpon HOM05D000917 ORTHO05D000764 4.1e-07 57.4 40 67.5
HPP92_025363 Vanilla planifolia HOM05D000917 ORTHO05D000764 6.9e-07 56.6 41 65.9
Actinidia15410 Actinidia chinensis HOM05D000917 ORTHO05D000764 9.0e-07 56.2 41 65.9
MSTRG.25234 Avicennia marina HOM05D000917 ORTHO05D000764 9.0e-07 56.2 40 70.0
Lj4A26G46 Lonicera japonica HOM05D000917 ORTHO05D000764 9.0e-07 56.2 41 68.3
Ca_13409_v3 Cicer arietinum L. HOM05D000917 ORTHO05D000764 1.2e-06 55.8 41 70.7
PGR083G1001 Punica granatum HOM05D000917 ORTHO05D000764 1.2e-06 55.8 41 65.9
Cpa.g.c35564 Carica papaya HOM05D000917 ORTHO05D000764 1.5e-06 55.5 40 67.5
Hma1.2p1_0638F.1_g193730 Hydrangea macrophylla HOM05D000917 ORTHO05D000764 1.5e-06 55.5 41 65.9
Solyc04g081280.3 Solanum lycopersicum HOM05D000917 ORTHO05D000764 1.5e-06 55.5 41 63.4
Sopen04g034900 Solanum pennellii HOM05D000917 ORTHO05D000764 1.5e-06 55.5 41 63.4
PGSC0003DMG400003725 Solanum tuberosum HOM05D000917 ORTHO05D000764 1.5e-06 55.5 41 63.4
TPR.G34371 Trifolium pratense HOM05D000917 ORTHO05D000764 1.5e-06 55.5 41 65.9
TAR381G0010 Trochodendron aralioides HOM05D000917 ORTHO05D000764 1.5e-06 55.5 41 63.4
Nitab4.5_0001988g0080 Nicotiana tabacum HOM05D000917 ORTHO05D000764 2.0e-06 55.1 41 63.4
THA.LOC104811387 Tarenaya hassleriana HOM05D000917 ORTHO05D000764 2.0e-06 55.1 41 63.4
Carub.0002s2249 Capsella rubella HOM05D000917 ORTHO05D000764 2.6e-06 54.7 41 65.9
Hund24102 Selenicereus undatus HOM05D000917 ORTHO05D000764 2.6e-06 54.7 40 65.0
Atru.chr13.317 Acer truncatum HOM05D000917 ORTHO05D000764 3.4e-06 54.3 44 68.2
THA.LOC104809408 Tarenaya hassleriana HOM05D000917 ORTHO05D000764 4.5e-06 53.9 41 61.0
vmacro21716 Vaccinium macrocarpon HOM05D000917 ORTHO05D000764 4.5e-06 53.9 41 58.5
Nn5g29327 Nelumbo nucifera HOM05D000917 ORTHO05D000764 7.7e-06 53.1 41 61.0
Phvul.003G280400 Phaseolus vulgaris HOM05D000917 ORTHO05D000764 7.7e-06 53.1 41 65.9
CSS0031470 Camellia sinensis var. sinensis HOM05D000917 ORTHO05D000764 1.0e-05 52.8 41 63.4
Rhsim06G0022800 Rhododendron simsii HOM05D000917 ORTHO05D000764 1.0e-05 52.8 41 56.1


User provided reference genes

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