Gene: Cc10_g01840

General Information

Structural Information

  • Species Coffea canephora
  • Gene Identifier Cc10_g01840
  • Transcript Identifier Cc10_g01840.1
  • Gene Type Coding gene
  • Location chr10 : 1332004-1340672 : negative

Gene Family Information

  • ID HOM05D000917
  • #Genes/#Species 655/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • UniProtKB Q9FQ02
  • UniProtKB F6H077
  • UniProtKB I1MC52
  • UniProtKB Q9FQ03
  • UniProtKB B9R871
  • UniProtKB Q9U299
  • id GSCOCG00024673001

Descriptions

  • Description 5'-3' exoribonuclease 3
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006139
IEA
InterPronucleobase-containing compound metabolic process
GO:0071035
ISO
PLAZA Integrative Orthologynuclear polyadenylation-dependent rRNA catabolic process AT1G75660
GO:0000967
ISO
PLAZA Integrative OrthologyrRNA 5'-end processing AT1G75660
GO:0060149
ISO
PLAZA Integrative Orthologynegative regulation of posttranscriptional gene silencing AT1G75660
GO:0010587
ISO
PLAZA Integrative OrthologymiRNA catabolic process AT1G75660

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0008270
IEA
InterProzinc ion binding
GO:0004527
IEA
InterProexonuclease activity
GO:0004534
IEA
InterPro5'-3' exoribonuclease activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding Cre06.g280050

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
InterPronucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001878 Zinc finger, CCHC-type
IPR004859 Putative 5-3 exonuclease
IPR017151 5'-3' exoribonuclease type 2
IPR041412 Xrn1, helical domain
IPR036875 Zinc finger, CCHC-type superfamily
IPR027073 5'-3' exoribonuclease
Mapman id Description
16.4.3.2 RNA processing.RNA surveillance.non-canonical RNA decapping and decay.exoribonuclease (RAT1/XRN2)