Gene: CSS0031470
General Information
Structural Information
- Species Camellia sinensis var. sinensis
- Gene Identifier CSS0031470
- Transcript Identifier CSS0031470.1
- Gene Type Coding gene
- Location Chr9 : 147760544-147779063 : positive
Gene Family Information
- ID HOM05D000917
- #Genes/#Species 655/100
- Phylogenetic origin
- ID ORTHO05D000764
- #Genes/#Species 624/100
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid CSS0031470.1
Descriptions
- Description unnamed protein product [Coffea canephora]
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0006139 | IEA | InterPro | nucleobase-containing compound metabolic process | |
GO:0071035 | ISO | PLAZA Integrative Orthology | nuclear polyadenylation-dependent rRNA catabolic process | AT1G75660 |
GO:0000967 | ISO | PLAZA Integrative Orthology | rRNA 5'-end processing | AT1G75660 |
GO:0060149 | ISO | PLAZA Integrative Orthology | negative regulation of posttranscriptional gene silencing | AT1G75660 |
GO:0010587 | ISO | PLAZA Integrative Orthology | miRNA catabolic process | AT1G75660 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0003676 | IEA | InterPro | nucleic acid binding | |
GO:0008270 | IEA | InterPro | zinc ion binding | |
GO:0004527 | IEA | InterPro | exonuclease activity | |
GO:0004534 | IEA | InterPro | 5'-3' exoribonuclease activity | |
GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | Cre06.g280050 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005634 | IEA | InterPro | nucleus |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
16.4.3.2 | RNA processing.RNA surveillance.non-canonical RNA decapping and decay.exoribonuclease (RAT1/XRN2) |