Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund27773 Selenicereus undatus HOM05D005216 ORTHO05D006453 1.1e-49 199.5 92 100.0
Hund27777 Selenicereus undatus HOM05D005216 ORTHO05D006453 1.1e-49 199.5 92 100.0
Ah.01g017050 Amaranthus hybridus HOM05D005216 ORTHO05D006453 9.4e-41 169.9 91 80.2
AUR62022292 Chenopodium quinoa HOM05D005216 ORTHO05D006453 3.6e-40 167.9 91 79.1
Eucgr.J02895 Eucalyptus grandis HOM05D005216 ORTHO05D006453 1.0e-39 166.4 91 76.9
AUR62023880 Chenopodium quinoa HOM05D005216 ORTHO05D006453 6.7e-39 163.7 91 76.9
Hma1.2p1_0388F.1_g142040 Hydrangea macrophylla HOM05D005216 ORTHO05D006453 1.5e-38 162.5 91 73.6
EL10Ac9g21148 Beta vulgaris HOM05D005216 ORTHO05D006453 2.0e-38 162.2 91 76.9
Sc15g0000030 Simmondsia chinensis HOM05D005216 ORTHO05D006453 2.0e-38 162.2 91 74.7
GSVIVG01016904001 Vitis vinifera HOM05D005216 ORTHO05D006453 5.7e-38 160.6 91 73.6
QL05p016421 Quercus lobata HOM05D005216 ORTHO05D006453 6.3e-37 157.1 91 72.5
TAR636G1794 Trochodendron aralioides HOM05D005216 ORTHO05D006453 6.3e-37 157.1 91 70.3
Dinv37942 Davidia involucrata HOM05D005216 ORTHO05D006453 1.4e-36 156.0 91 71.4
Actinidia21733 Actinidia chinensis HOM05D005216 ORTHO05D006453 2.4e-36 155.2 91 71.4
Cfa003614 Carpinus fangiana HOM05D005216 ORTHO05D006453 2.4e-36 155.2 91 71.4
MD17G1179000 Malus domestica HOM05D005216 ORTHO05D006453 3.1e-36 154.8 92 72.8
CSS0048704 Camellia sinensis var. sinensis HOM05D005216 ORTHO05D006453 4.1e-36 154.5 91 73.6
COL.COLO4_30571 Corchorus olitorius HOM05D005216 ORTHO05D006453 5.3e-36 154.1 91 71.4
Thecc.06G105100 Theobroma cacao HOM05D005216 ORTHO05D006453 7.0e-36 153.7 91 69.2
Duzib192G0447 Durio zibethinus HOM05D005216 ORTHO05D006453 9.1e-36 153.3 91 68.1
CiPaw.02G142800 Carya illinoinensis HOM05D005216 ORTHO05D006453 1.2e-35 152.9 91 71.4
Lalb_Chr14g0372921 Lupinus albus HOM05D005216 ORTHO05D006453 1.2e-35 152.9 91 68.1
Prupe.3G054000 Prunus persica HOM05D005216 ORTHO05D006453 1.2e-35 152.9 91 70.3
Nn8g38966 Nelumbo nucifera HOM05D005216 ORTHO05D006453 1.6e-35 152.5 91 71.4
Potri.001G195300 Populus trichocarpa HOM05D005216 ORTHO05D006453 1.6e-35 152.5 92 71.7
PGR102G1400 Punica granatum HOM05D005216 ORTHO05D006453 2.0e-35 152.1 94 71.3
MBI01_g16587_MAGBIO Magnolia biondii HOM05D005216 ORTHO05D006453 2.6e-35 151.8 92 72.8
Aqoxy7G03942 Aquilegia oxysepala HOM05D005216 ORTHO05D006453 3.5e-35 151.4 92 71.7
Gohir.A10G063600 Gossypium hirsutum HOM05D005216 ORTHO05D006453 3.5e-35 151.4 91 68.1
Gohir.D10G065200 Gossypium hirsutum HOM05D005216 ORTHO05D006453 3.5e-35 151.4 91 69.2
Gorai.011G069100 Gossypium raimondii HOM05D005216 ORTHO05D006453 3.5e-35 151.4 91 69.2
SGA_v2.0_scaffold71G23736 Striga asiatica HOM05D005216 ORTHO05D006453 3.5e-35 151.4 91 72.5
arahy.Tifrunner.gnm1.ann1.412K95 Arachis hypogaea HOM05D005216 ORTHO05D006453 4.5e-35 151.0 91 69.2
arahy.Tifrunner.gnm1.ann1.CL3NUC Arachis hypogaea HOM05D005216 ORTHO05D006453 4.5e-35 151.0 91 69.2
MELO3C024409.2 Cucumis melo HOM05D005216 ORTHO05D006453 7.7e-35 150.2 91 70.3
Peaxi162Scf00038g01234 Petunia axillaris HOM05D005216 ORTHO05D006453 7.7e-35 150.2 91 70.3
MSTRG.22612 Avicennia marina HOM05D005216 ORTHO05D006453 1.0e-34 149.8 91 69.2
Manes.11G029600 Manihot esculenta HOM05D005216 ORTHO05D006453 1.0e-34 149.8 91 69.2
Sabra01G0143000 Salix brachista HOM05D005216 ORTHO05D006453 1.0e-34 149.8 92 70.7
ClCG09G000480 Citrullus lanatus HOM05D005216 ORTHO05D006453 1.7e-34 149.1 92 71.7
Lj3g0001017 Lotus japonicus HOM05D005216 ORTHO05D006453 1.7e-34 149.1 93 69.9
CsaV3_7G034980 Cucumis sativus L. HOM05D005216 ORTHO05D006453 2.2e-34 148.7 91 69.2
ECA247G0411 Erigeron canadensis HOM05D005216 ORTHO05D006453 2.2e-34 148.7 91 69.2
Thhalv10020447m.g Eutrema salsugineum HOM05D005216 ORTHO05D006453 2.2e-34 148.7 91 69.2
Lj5A50G63 Lonicera japonica HOM05D005216 ORTHO05D006453 2.2e-34 148.7 91 67.0
BcaB06g26221 Brassica carinata HOM05D005216 ORTHO05D006453 2.9e-34 148.3 91 69.2
SalBow6G0343 Salvia bowleyana HOM05D005216 ORTHO05D006453 2.9e-34 148.3 93 71.0
Sp3g19360 Schrenkiella parvula HOM05D005216 ORTHO05D006453 2.9e-34 148.3 91 69.2
Glyma.15G022200 Glycine max HOM05D005216 ORTHO05D006453 3.8e-34 147.9 96 67.7
Sed0006988 Sechium edule HOM05D005216 ORTHO05D006453 5.0e-34 147.5 90 68.9
BcaC05g28181 Brassica carinata HOM05D005216 ORTHO05D006453 6.5e-34 147.1 91 69.2
A05p27300 Brassica napus HOM05D005216 ORTHO05D006453 6.5e-34 147.1 91 69.2
C05p42210 Brassica napus HOM05D005216 ORTHO05D006453 6.5e-34 147.1 91 69.2
BolC5t32949H Brassica oleracea HOM05D005216 ORTHO05D006453 6.5e-34 147.1 91 69.2
BraA05t21622Z Brassica rapa HOM05D005216 ORTHO05D006453 6.5e-34 147.1 91 69.2
Carub.0003s2133 Capsella rubella HOM05D005216 ORTHO05D006453 8.5e-34 146.7 91 68.1
CARHR097230 Cardamine hirsuta HOM05D005216 ORTHO05D006453 8.5e-34 146.7 91 68.1
Glyma.13G352500 Glycine max HOM05D005216 ORTHO05D006453 8.5e-34 146.7 94 66.0
VMungo1080G0616 Vigna mungo HOM05D005216 ORTHO05D006453 1.1e-33 146.4 96 64.6
Ca_01178_v3 Cicer arietinum L. HOM05D005216 ORTHO05D006453 1.5e-33 146.0 93 64.5
Ciclev10025277m.g Citrus clementina HOM05D005216 ORTHO05D006453 1.5e-33 146.0 90 70.0
Migut.I00980 Erythranthe guttata HOM05D005216 ORTHO05D006453 1.5e-33 146.0 92 68.5
FAN09G2417 Fragaria x ananassa HOM05D005216 ORTHO05D006453 1.5e-33 146.0 92 69.6
AT3G21300 Arabidopsis thaliana HOM05D005216 ORTHO05D006453 1.9e-33 145.6 91 68.1
Nitab4.5_0009106g0020 Nicotiana tabacum HOM05D005216 ORTHO05D006453 1.9e-33 145.6 91 70.3
PSO210G0066 Papaver somniferum HOM05D005216 ORTHO05D006453 1.9e-33 145.6 90 70.0
RcHm_v2.0_Chr2g0141991 Rosa chinensis HOM05D005216 ORTHO05D006453 1.9e-33 145.6 91 68.1
Aa31LG8G8010 Aethionema arabicum HOM05D005216 ORTHO05D006453 2.5e-33 145.2 91 68.1
Nitab4.5_0009613g0010 Nicotiana tabacum HOM05D005216 ORTHO05D006453 2.5e-33 145.2 91 70.3
CANSAT56G3252 Cannabis sativa HOM05D005216 ORTHO05D006453 3.2e-33 144.8 91 65.9
HanXRQChr04g0095951 Helianthus annuus HOM05D005216 ORTHO05D006453 3.2e-33 144.8 91 67.0
FvH4_6g32800 Fragaria vesca HOM05D005216 ORTHO05D006453 4.2e-33 144.4 92 68.5
unitig_32.g11583 Utricularia gibba HOM05D005216 ORTHO05D006453 4.2e-33 144.4 91 65.9
Atru.chr8.582 Acer truncatum HOM05D005216 ORTHO05D006453 5.5e-33 144.1 91 67.0
Phvul.005G161800 Phaseolus vulgaris HOM05D005216 ORTHO05D006453 5.5e-33 144.1 95 64.2
AL3G35360 Arabidopsis lyrata HOM05D005216 ORTHO05D006453 7.2e-33 143.7 91 67.0
PSO210G6279 Papaver somniferum HOM05D005216 ORTHO05D006453 7.2e-33 143.7 91 71.4
Solyc03g121260.3 Solanum lycopersicum HOM05D005216 ORTHO05D006453 9.4e-33 143.3 91 67.0
Sopen03g040070 Solanum pennellii HOM05D005216 ORTHO05D006453 9.4e-33 143.3 91 67.0
TPR.G6542 Trifolium pratense HOM05D005216 ORTHO05D006453 1.2e-32 142.9 93 64.5
CAN.G1143.37 Capsicum annuum HOM05D005216 ORTHO05D006453 1.6e-32 142.5 91 65.9
Lsat_1_v5_gn_1_36600 Lactuca sativa HOM05D005216 ORTHO05D006453 1.6e-32 142.5 91 67.0
Cc04_g02310 Coffea canephora HOM05D005216 ORTHO05D006453 2.7e-32 141.7 91 68.1
Psat5g294680 Pisum sativum HOM05D005216 ORTHO05D006453 2.7e-32 141.7 93 60.2
Medtr2g100500 Medicago truncatula HOM05D005216 ORTHO05D006453 4.7e-32 141.0 93 63.4
Rhsim08G0230200 Rhododendron simsii HOM05D005216 ORTHO05D006453 4.7e-32 141.0 91 63.7
ATR0789G110 Amborella trichopoda HOM05D005216 ORTHO05D006453 1.8e-31 139.0 92 64.1
DCAR_031420 Daucus carota HOM05D005216 ORTHO05D006453 1.8e-31 139.0 92 67.4
Os01g0193600 Oryza sativa ssp. japonica HOM05D005216 ORTHO05D006453 4.0e-31 137.9 99 62.6
Atru.chr7.121 Acer truncatum HOM05D005216 ORTHO05D006453 6.7e-31 137.1 91 63.7
Thhalv10021840m.g Eutrema salsugineum HOM05D005216 ORTHO05D006453 6.7e-31 137.1 91 64.8
Atru.chr11.191 Acer truncatum HOM05D005216 ORTHO05D006453 8.8e-31 136.7 90 64.4
Eucgr.J02891 Eucalyptus grandis HOM05D005216 ORTHO05D006453 1.7e-29 132.5 74 75.7
HPP92_002841 Vanilla planifolia HOM05D005216 ORTHO05D006453 3.7e-29 131.3 92 58.7
Oeu052821.2 Olea europaea HOM05D005216 ORTHO05D006453 6.3e-29 130.6 138 45.7
vmacro18831 Vaccinium macrocarpon HOM05D005216 ORTHO05D006453 4.1e-28 127.9 90 58.9
PGSC0003DMG400002513 Solanum tuberosum HOM05D005216 ORTHO05D006453 1.1e-25 119.8 141 43.3
Haze_15911 Corylus avellana HOM05D005216 ORTHO05D006453 3.6e-24 114.8 182 36.3
FAN14G3972 Fragaria x ananassa HOM05D005216 ORTHO05D006453 2.8e-21 105.1 72 66.7
FAN02G1148 Fragaria x ananassa HOM05D005216 ORTHO05D006453 2.0e-19 99.0 57 70.2
Pp3c25_5440 Physcomitrium patens HOM05D005216 ORTHO05D006453 4.5e-19 97.8 98 48.0
AagrBONN_evm.TU.Sc2ySwM_368.3132 Anthoceros agrestis HOM05D005216 ORTHO05D006453 1.0e-18 96.7 103 46.6
Mapoly0054s0113 Marchantia polymorpha HOM05D005216 ORTHO05D006453 2.9e-18 95.1 105 43.8
SMO118G0221 Selaginella moellendorffii HOM05D005216 ORTHO05D006453 5.0e-18 94.4 92 47.8
Cpa.g.sc131.16 Carica papaya HOM05D005216 ORTHO05D006453 8.5e-18 93.6 55 72.7
Hma1.2p1_0388F.1_g142030 Hydrangea macrophylla HOM05D005216 ORTHO05D006453 1.9e-17 92.4 55 70.9
Atru.chr1.3604 Acer truncatum HOM05D005216 ORTHO05D006453 1.6e-16 89.4 48 75.0
ECA247G0873 Erigeron canadensis HOM05D005216 ORTHO05D006453 9.8e-14 80.1 91 42.9
PRCOL_00006587 Prasinoderma coloniale HOM05D005216 ORTHO05D006453 2.0e-11 72.4 129 32.6
Cre12.g501100 Chlamydomonas reinhardtii HOM05D005216 ORTHO05D006453 2.6e-06 55.5 90 40.0
Zm00001eb121120 Zea mays HOM05D005216 ORTHO05D006453 4.4e-06 54.7 27 74.1


User provided reference genes

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