Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund21683 Selenicereus undatus HOM05D006305 ORTHO05D007984 3.0e-200 701.8 403 100.0
EL10Ac4g09328 Beta vulgaris HOM05D006305 ORTHO05D007984 1.1e-154 550.4 386 73.8
Ah.06g189130 Amaranthus hybridus HOM05D006305 ORTHO05D007984 3.0e-147 525.8 386 75.4
AUR62005086 Chenopodium quinoa HOM05D006305 ORTHO05D007984 2.4e-133 479.6 293 82.3
AUR62000888 Chenopodium quinoa HOM05D006305 ORTHO05D007984 3.2e-133 479.2 293 81.9
Eucgr.H04470 Eucalyptus grandis HOM05D006305 ORTHO05D007984 4.1e-133 478.8 370 74.9
FAN14G0751 Fragaria x ananassa HOM05D006305 ORTHO05D007984 2.1e-132 476.5 369 68.0
FAN14G5210 Fragaria x ananassa HOM05D006305 ORTHO05D007984 2.1e-132 476.5 369 68.0
FAN05G5097 Fragaria x ananassa HOM05D006305 ORTHO05D007984 4.6e-132 475.3 369 67.8
MD04G1208500 Malus domestica HOM05D006305 ORTHO05D007984 4.6e-132 475.3 383 69.7
CSS0021232 Camellia sinensis var. sinensis HOM05D006305 ORTHO05D007984 6.0e-132 474.9 381 73.8
FvH4_6g05460 Fragaria vesca HOM05D006305 ORTHO05D007984 1.7e-131 473.4 369 67.8
RcHm_v2.0_Chr3g0454231 Rosa chinensis HOM05D006305 ORTHO05D007984 3.0e-131 472.6 382 65.7
CSS0018445 Camellia sinensis var. sinensis HOM05D006305 ORTHO05D007984 6.6e-131 471.5 366 73.8
Manes.09G164300 Manihot esculenta HOM05D006305 ORTHO05D007984 1.1e-130 470.7 366 70.5
CiPaw.07G015100 Carya illinoinensis HOM05D006305 ORTHO05D007984 3.3e-130 469.2 377 69.2
Dinv23970 Davidia involucrata HOM05D006305 ORTHO05D007984 4.3e-130 468.8 372 69.9
VMungo0720G1654 Vigna mungo HOM05D006305 ORTHO05D007984 7.3e-130 468.0 369 75.1
Gorai.013G204500 Gossypium raimondii HOM05D006305 ORTHO05D007984 9.5e-130 467.6 363 72.2
Phvul.007G181700 Phaseolus vulgaris HOM05D006305 ORTHO05D007984 9.5e-130 467.6 371 70.1
Medtr1g082570 Medicago truncatula HOM05D006305 ORTHO05D007984 1.2e-129 467.2 388 65.5
TWI56G0624 Tripterygium wilfordii HOM05D006305 ORTHO05D007984 1.6e-129 466.8 367 70.6
Atru.chr2.472 Acer truncatum HOM05D006305 ORTHO05D007984 2.1e-129 466.5 364 68.1
CANSAT54G0217 Cannabis sativa HOM05D006305 ORTHO05D007984 2.1e-129 466.5 366 66.7
Lj5g0026498 Lotus japonicus HOM05D006305 ORTHO05D007984 2.1e-129 466.5 364 77.2
QL03p004578 Quercus lobata HOM05D006305 ORTHO05D007984 2.8e-129 466.1 393 64.1
arahy.Tifrunner.gnm1.ann1.84BFE2 Arachis hypogaea HOM05D006305 ORTHO05D007984 3.6e-129 465.7 372 74.7
Ca_10097_v3 Cicer arietinum L. HOM05D006305 ORTHO05D007984 4.7e-129 465.3 394 64.0
Gohir.D13G179200 Gossypium hirsutum HOM05D006305 ORTHO05D007984 4.7e-129 465.3 362 72.7
GSVIVG01000016001 Vitis vinifera HOM05D006305 ORTHO05D007984 1.1e-128 464.2 361 72.6
Lj9A683T26 Lonicera japonica HOM05D006305 ORTHO05D007984 6.8e-128 461.5 372 68.5
Glyma.10G156300 Glycine max HOM05D006305 ORTHO05D007984 8.9e-128 461.1 388 63.4
PGR031G3204 Punica granatum HOM05D006305 ORTHO05D007984 8.9e-128 461.1 386 68.7
Gohir.A13G173500 Gossypium hirsutum HOM05D006305 ORTHO05D007984 1.2e-127 460.7 370 73.2
FAN05G0068 Fragaria x ananassa HOM05D006305 ORTHO05D007984 1.5e-127 460.3 366 66.1
Cc02_g33730 Coffea canephora HOM05D006305 ORTHO05D007984 2.6e-127 459.5 364 70.1
Rhsim05G0143900 Rhododendron simsii HOM05D006305 ORTHO05D007984 2.6e-127 459.5 391 71.4
TAR636G3548 Trochodendron aralioides HOM05D006305 ORTHO05D007984 9.9e-127 457.6 376 74.5
arahy.Tifrunner.gnm1.ann1.39Z7HW Arachis hypogaea HOM05D006305 ORTHO05D007984 1.3e-126 457.2 373 74.8
Lsat_1_v5_gn_2_67520 Lactuca sativa HOM05D006305 ORTHO05D007984 1.7e-126 456.8 358 70.1
Sabra05G0037100 Salix brachista HOM05D006305 ORTHO05D007984 2.2e-126 456.4 387 71.6
Nitab4.5_0002756g0070 Nicotiana tabacum HOM05D006305 ORTHO05D007984 2.9e-126 456.1 373 70.0
Psat0ss6702g0320 Pisum sativum HOM05D006305 ORTHO05D007984 3.2e-125 452.6 390 66.2
PGSC0003DMG400024658 Solanum tuberosum HOM05D006305 ORTHO05D007984 5.4e-125 451.8 366 70.2
Thecc.05G307300 Theobroma cacao HOM05D006305 ORTHO05D007984 5.4e-125 451.8 387 68.2
Carub.0003s0446 Capsella rubella HOM05D006305 ORTHO05D007984 7.8e-124 448.0 387 66.1
CAN.G479.41 Capsicum annuum HOM05D006305 ORTHO05D007984 7.8e-124 448.0 386 63.2
SGA_v2.0_scaffold34G13953 Striga asiatica HOM05D006305 ORTHO05D007984 1.0e-123 447.6 361 68.1
Sopen03g034570 Solanum pennellii HOM05D006305 ORTHO05D007984 1.3e-123 447.2 372 72.8
ClCG08G002270 Citrullus lanatus HOM05D006305 ORTHO05D007984 2.3e-123 446.4 394 62.9
Lalb_Chr02g0148341 Lupinus albus HOM05D006305 ORTHO05D007984 2.3e-123 446.4 394 69.5
Solyc03g115580.4 Solanum lycopersicum HOM05D006305 ORTHO05D007984 2.3e-123 446.4 404 65.1
HanXRQChr15g0472081 Helianthus annuus HOM05D006305 ORTHO05D007984 6.6e-123 444.9 358 71.5
Peaxi162Scf00274g00026 Petunia axillaris HOM05D006305 ORTHO05D007984 2.5e-122 443.0 408 62.0
Potri.005G036700 Populus trichocarpa HOM05D006305 ORTHO05D007984 2.5e-122 443.0 373 69.7
AL3G15630 Arabidopsis lyrata HOM05D006305 ORTHO05D007984 9.6e-122 441.0 387 67.4
SalBow6G6985 Salvia bowleyana HOM05D006305 ORTHO05D007984 4.7e-121 438.7 385 62.9
DCAR_029432 Daucus carota HOM05D006305 ORTHO05D007984 1.8e-120 436.8 374 71.4
A05p42370 Brassica napus HOM05D006305 ORTHO05D007984 3.1e-120 436.0 378 64.3
BraA05t23013Z Brassica rapa HOM05D006305 ORTHO05D007984 3.1e-120 436.0 378 64.3
ECA238G3439 Erigeron canadensis HOM05D006305 ORTHO05D007984 3.1e-120 436.0 360 73.1
BcaC05g30168 Brassica carinata HOM05D006305 ORTHO05D007984 4.0e-120 435.6 369 67.2
Thhalv10020823m.g Eutrema salsugineum HOM05D006305 ORTHO05D007984 4.0e-120 435.6 370 65.4
Aa31LG5G15590 Aethionema arabicum HOM05D006305 ORTHO05D007984 5.2e-120 435.3 418 64.6
BcaC05g30009 Brassica carinata HOM05D006305 ORTHO05D007984 6.9e-120 434.9 375 62.4
C05p61980 Brassica napus HOM05D006305 ORTHO05D007984 6.9e-120 434.9 375 62.4
Hma1.2p1_0666F.1_g199520 Hydrangea macrophylla HOM05D006305 ORTHO05D007984 6.9e-120 434.9 308 76.9
Sp3g04060 Schrenkiella parvula HOM05D006305 ORTHO05D007984 1.5e-119 433.7 372 61.8
MSTRG.306 Avicennia marina HOM05D006305 ORTHO05D007984 2.0e-119 433.3 396 63.4
BolC5t34858H Brassica oleracea HOM05D006305 ORTHO05D007984 5.8e-119 431.8 375 61.6
Migut.F01514 Erythranthe guttata HOM05D006305 ORTHO05D007984 8.4e-118 427.9 368 62.8
vmacro19639 Vaccinium macrocarpon HOM05D006305 ORTHO05D007984 1.6e-116 423.7 429 61.1
Ciclev10001229m.g Citrus clementina HOM05D006305 ORTHO05D007984 2.1e-116 423.3 389 62.7
Aqoxy5G04250 Aquilegia oxysepala HOM05D006305 ORTHO05D007984 7.8e-116 421.4 371 60.9
CDE11G1040 Ceratophyllum demersum HOM05D006305 ORTHO05D007984 8.7e-115 417.9 374 60.7
FAN02G0061 Fragaria x ananassa HOM05D006305 ORTHO05D007984 1.1e-114 417.5 367 62.4
ATR0620G066 Amborella trichopoda HOM05D006305 ORTHO05D007984 3.3e-114 416.0 394 59.9
Prupe.6G329400 Prunus persica HOM05D006305 ORTHO05D007984 1.4e-112 410.6 266 77.4
THA.LOC104820089 Tarenaya hassleriana HOM05D006305 ORTHO05D007984 1.5e-111 407.1 415 58.3
BcaC05g30019 Brassica carinata HOM05D006305 ORTHO05D007984 6.4e-110 401.7 375 59.2
COL.COLO4_19840 Corchorus olitorius HOM05D006305 ORTHO05D007984 1.6e-108 397.1 228 83.3
unitig_746.g26625 Utricularia gibba HOM05D006305 ORTHO05D007984 6.0e-108 395.2 343 61.2
Zm00001eb043410 Zea mays HOM05D006305 ORTHO05D007984 7.9e-108 394.8 407 57.5
Cfa006552 Carpinus fangiana HOM05D006305 ORTHO05D007984 6.7e-107 391.7 291 73.9
HPP92_015091 Vanilla planifolia HOM05D006305 ORTHO05D007984 1.3e-105 387.5 395 56.2
MBI04_g21739_MAGBIO Magnolia biondii HOM05D006305 ORTHO05D007984 3.7e-105 386.0 269 73.6
Os10g0518900 Oryza sativa ssp. japonica HOM05D006305 ORTHO05D007984 1.1e-104 384.4 261 74.3
Nn3g18889 Nelumbo nucifera HOM05D006305 ORTHO05D007984 1.4e-104 384.0 281 79.4
Haze_04230 Corylus avellana HOM05D006305 ORTHO05D007984 1.3e-102 377.5 407 58.7
MELO3C025022.2 Cucumis melo HOM05D006305 ORTHO05D007984 1.1e-101 374.4 320 63.1
PSO782G4398 Papaver somniferum HOM05D006305 ORTHO05D007984 1.9e-101 373.6 360 60.8
CsaV3_6G002610 Cucumis sativus L. HOM05D006305 ORTHO05D007984 5.5e-101 372.1 291 66.0
PSO063G7033 Papaver somniferum HOM05D006305 ORTHO05D007984 5.1e-99 365.5 359 61.3
Sed0018566 Sechium edule HOM05D006305 ORTHO05D007984 1.5e-98 364.0 289 65.1
AT3G05210 Arabidopsis thaliana HOM05D006305 ORTHO05D007984 3.5e-92 342.8 283 68.6
SMO146G0211 Selaginella moellendorffii HOM05D006305 ORTHO05D007984 7.9e-92 341.7 219 75.3
Ciclev10002028m.g Citrus clementina HOM05D006305 ORTHO05D007984 2.3e-91 340.1 253 70.4
Pp3c6_29610 Physcomitrium patens HOM05D006305 ORTHO05D007984 1.6e-89 334.0 411 46.2
TPR.G22794 Trifolium pratense HOM05D006305 ORTHO05D007984 4.1e-88 329.3 233 74.2
Sc16g0008400 Simmondsia chinensis HOM05D006305 ORTHO05D007984 6.9e-88 328.6 253 70.8
Mapoly0128s0010 Marchantia polymorpha HOM05D006305 ORTHO05D007984 2.0e-87 327.0 342 61.1
CBR_g4857 Chara braunii HOM05D006305 ORTHO05D007984 8.5e-86 321.6 243 65.0
Nitab4.5_0001211g0080 Nicotiana tabacum HOM05D006305 ORTHO05D007984 1.2e-84 317.8 373 54.7
Ciclev10003828m.g Citrus clementina HOM05D006305 ORTHO05D007984 3.9e-83 312.8 315 55.6
Duzib106G1918 Durio zibethinus HOM05D006305 ORTHO05D007984 1.9e-82 310.5 374 56.4
Cpa.g.sc1183.2 Carica papaya HOM05D006305 ORTHO05D007984 3.7e-81 306.2 384 49.5
Hma1.2p1_0666F.1_g199530 Hydrangea macrophylla HOM05D006305 ORTHO05D007984 1.5e-79 300.8 199 76.9
MBI04_g44620_MAGBIO Magnolia biondii HOM05D006305 ORTHO05D007984 6.5e-70 268.9 140 91.4
CARHR079550 Cardamine hirsuta HOM05D006305 ORTHO05D007984 8.0e-68 261.9 145 82.1
Cre03.g196651 Chlamydomonas reinhardtii HOM05D006305 ORTHO05D007984 2.4e-64 250.4 203 59.1
Ciclev10003373m.g Citrus clementina HOM05D006305 ORTHO05D007984 5.5e-61 239.2 291 51.2
AagrBONN_evm.TU.Sc2ySwM_369.531 Anthoceros agrestis HOM05D006305 ORTHO05D007984 4.7e-60 236.1 267 47.2
Ciclev10003460m.g Citrus clementina HOM05D006305 ORTHO05D007984 1.2e-58 231.5 257 53.7
PRCOL_00003423 Prasinoderma coloniale HOM05D006305 ORTHO05D007984 3.6e-44 183.3 190 45.8
Cfa026476 Carpinus fangiana HOM05D006305 ORTHO05D007984 9.2e-40 168.7 291 34.0
MCO01G606 Micromonas commoda HOM05D006305 ORTHO05D007984 1.3e-33 148.3 194 38.7
TPR.G7405 Trifolium pratense HOM05D006305 ORTHO05D007984 1.6e-28 131.3 148 57.4
SalBow6G3462 Salvia bowleyana HOM05D006305 ORTHO05D007984 1.0e-22 112.1 144 47.9
Glyma.20G232002 Glycine max HOM05D006305 ORTHO05D007984 3.3e-21 107.1 76 71.1
Cpa.g.sc48.16 Carica papaya HOM05D006305 ORTHO05D007984 3.6e-12 77.0 86 59.3
Pp3c16_18520 Physcomitrium patens HOM05D006305 ORTHO05D007984 2.4e-11 74.3 159 32.1
MELO3C033326.2 Cucumis melo HOM05D006305 ORTHO05D168382 3.8e-09 67.0 53 56.6
MBI04_g33407_MAGBIO Magnolia biondii HOM05D006305 ORTHO05D007984 2.3e-06 57.8 124 40.3


User provided reference genes

Program Settings