Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund15496 Selenicereus undatus HOM05D005536 ORTHO05D006999 1.7e-151 539.3 268 100.0
Hma1.2p1_1108F.1_g257740 Hydrangea macrophylla HOM05D005536 ORTHO05D006999 4.0e-116 421.8 260 76.9
Ah.03g139170 Amaranthus hybridus HOM05D005536 ORTHO05D006999 4.4e-115 418.3 265 77.0
COL.COLO4_11769 Corchorus olitorius HOM05D005536 ORTHO05D006999 2.9e-114 415.6 263 74.9
GSVIVG01023338001 Vitis vinifera HOM05D005536 ORTHO05D006999 6.4e-114 414.5 264 76.5
FAN13G0194 Fragaria x ananassa HOM05D005536 ORTHO05D006999 2.4e-113 412.5 265 74.7
FAN18G3948 Fragaria x ananassa HOM05D005536 ORTHO05D006999 9.2e-113 410.6 265 74.0
Prupe.1G573200 Prunus persica HOM05D005536 ORTHO05D006999 9.2e-113 410.6 263 73.8
AUR62007953 Chenopodium quinoa HOM05D005536 ORTHO05D006999 4.6e-112 408.3 265 76.2
FAN08G1062 Fragaria x ananassa HOM05D005536 ORTHO05D006999 4.6e-112 408.3 265 74.0
Dinv19387 Davidia involucrata HOM05D005536 ORTHO05D006999 1.7e-111 406.4 264 74.6
FvH4_5g28860 Fragaria vesca HOM05D005536 ORTHO05D006999 3.9e-111 405.2 265 73.6
FAN04G2224 Fragaria x ananassa HOM05D005536 ORTHO05D006999 5.1e-111 404.8 265 73.6
Lj5A254G85 Lonicera japonica HOM05D005536 ORTHO05D006999 6.6e-111 404.4 264 73.1
Atru.chr6.551 Acer truncatum HOM05D005536 ORTHO05D006999 1.1e-110 403.7 263 74.1
Duzib132G1177 Durio zibethinus HOM05D005536 ORTHO05D006999 1.1e-110 403.7 260 73.5
RcHm_v2.0_Chr7g0221201 Rosa chinensis HOM05D005536 ORTHO05D006999 1.5e-110 403.3 265 72.1
Sc18g0006730 Simmondsia chinensis HOM05D005536 ORTHO05D006999 1.9e-110 402.9 261 73.6
CiPaw.05G049900 Carya illinoinensis HOM05D005536 ORTHO05D006999 2.5e-110 402.5 267 73.0
Thecc.02G089300 Theobroma cacao HOM05D005536 ORTHO05D006999 2.5e-110 402.5 260 74.6
Gohir.A13G035900 Gossypium hirsutum HOM05D005536 ORTHO05D006999 3.3e-110 402.1 260 73.5
Ciclev10000782m.g Citrus clementina HOM05D005536 ORTHO05D006999 5.6e-110 401.4 266 72.2
Actinidia39023 Actinidia chinensis HOM05D005536 ORTHO05D006999 7.3e-110 401.0 261 74.3
QL02p099453 Quercus lobata HOM05D005536 ORTHO05D006999 2.1e-109 399.4 260 72.7
Manes.10G122900 Manihot esculenta HOM05D005536 ORTHO05D006999 3.6e-109 398.7 264 73.5
TAR376G0002 Trochodendron aralioides HOM05D005536 ORTHO05D006999 3.6e-109 398.7 268 72.0
Gorai.013G038700 Gossypium raimondii HOM05D005536 ORTHO05D006999 4.7e-109 398.3 260 72.7
HanXRQChr16g0512011 Helianthus annuus HOM05D005536 ORTHO05D006999 8.1e-109 397.5 260 74.2
Rhsim11G0127400 Rhododendron simsii HOM05D005536 ORTHO05D006999 8.1e-109 397.5 264 73.9
Atru.BG.35.p Acer truncatum HOM05D005536 ORTHO05D006999 1.1e-108 397.1 256 74.6
TWI59G0084 Tripterygium wilfordii HOM05D005536 ORTHO05D006999 1.1e-108 397.1 264 72.7
ECA236G1742 Erigeron canadensis HOM05D005536 ORTHO05D006999 1.8e-108 396.4 260 73.5
VMungo0540G0609 Vigna mungo HOM05D005536 ORTHO05D006999 2.3e-108 396.0 264 71.2
ClCG11G000890 Citrullus lanatus HOM05D005536 ORTHO05D006999 4.0e-108 395.2 263 73.0
Lj6g0001247 Lotus japonicus HOM05D005536 ORTHO05D006999 5.2e-108 394.8 260 72.3
TPR.G2082 Trifolium pratense HOM05D005536 ORTHO05D006999 5.2e-108 394.8 264 72.0
Ca_00061_v3 Cicer arietinum L. HOM05D005536 ORTHO05D006999 6.8e-108 394.4 267 71.9
Haze_01749 Corylus avellana HOM05D005536 ORTHO05D006999 6.8e-108 394.4 264 73.1
Gohir.D13G034200 Gossypium hirsutum HOM05D005536 ORTHO05D006999 8.9e-108 394.0 260 72.3
vmacro01743 Vaccinium macrocarpon HOM05D005536 ORTHO05D006999 8.9e-108 394.0 261 74.3
AUR62003134 Chenopodium quinoa HOM05D005536 ORTHO05D006999 1.5e-107 393.3 265 74.7
PGR042G3208 Punica granatum HOM05D005536 ORTHO05D006999 3.4e-107 392.1 259 73.0
AT1G22940 Arabidopsis thaliana HOM05D005536 ORTHO05D006999 7.5e-107 391.0 265 72.1
MBI06_g20964_MAGBIO Magnolia biondii HOM05D005536 ORTHO05D006999 1.3e-106 390.2 263 71.5
arahy.Tifrunner.gnm1.ann1.CHH5X5 Arachis hypogaea HOM05D005536 ORTHO05D006999 1.7e-106 389.8 265 71.3
Eucgr.G00559 Eucalyptus grandis HOM05D005536 ORTHO05D006999 1.7e-106 389.8 264 70.1
MD15G1428400 Malus domestica HOM05D005536 ORTHO05D006999 1.7e-106 389.8 263 72.6
Medtr2g006350 Medicago truncatula HOM05D005536 ORTHO05D006999 1.7e-106 389.8 267 70.0
arahy.Tifrunner.gnm1.ann1.DFQ1AC Arachis hypogaea HOM05D005536 ORTHO05D006999 2.2e-106 389.4 265 70.6
Psat1g222160 Pisum sativum HOM05D005536 ORTHO05D006999 2.2e-106 389.4 264 70.1
Sabra03G0008600 Salix brachista HOM05D005536 ORTHO05D006999 2.2e-106 389.4 264 72.3
Cfa005500 Carpinus fangiana HOM05D005536 ORTHO05D006999 2.9e-106 389.0 264 70.8
Thhalv10007358m.g Eutrema salsugineum HOM05D005536 ORTHO05D006999 2.9e-106 389.0 268 73.1
Lalb_Chr20g0123601 Lupinus albus HOM05D005536 ORTHO05D006999 1.1e-105 387.1 264 71.2
Nn1g08381 Nelumbo nucifera HOM05D005536 ORTHO05D006999 1.4e-105 386.7 260 72.7
PSO017G0725 Papaver somniferum HOM05D005536 ORTHO05D006999 1.4e-105 386.7 260 72.3
PSO170G4094 Papaver somniferum HOM05D005536 ORTHO05D006999 1.4e-105 386.7 260 72.3
CARHR023320 Cardamine hirsuta HOM05D005536 ORTHO05D006999 1.9e-105 386.3 265 70.9
AL1G36500 Arabidopsis lyrata HOM05D005536 ORTHO05D006999 4.1e-105 385.2 265 71.3
CANSAT11G0651 Cannabis sativa HOM05D005536 ORTHO05D006999 4.1e-105 385.2 260 70.4
Carub.0001s2244 Capsella rubella HOM05D005536 ORTHO05D006999 5.4e-105 384.8 265 71.3
Phvul.006G216300 Phaseolus vulgaris HOM05D005536 ORTHO05D006999 5.4e-105 384.8 258 71.3
DCAR_006692 Daucus carota HOM05D005536 ORTHO05D006999 9.2e-105 384.0 267 70.0
Aqoxy5G01212 Aquilegia oxysepala HOM05D005536 ORTHO05D006999 1.2e-104 383.6 260 71.5
Glyma.08G188200 Glycine max HOM05D005536 ORTHO05D006999 1.2e-104 383.6 258 71.7
MELO3C022605.2 Cucumis melo HOM05D005536 ORTHO05D006999 1.6e-104 383.3 263 70.3
Lsat_1_v5_gn_7_79100 Lactuca sativa HOM05D005536 ORTHO05D006999 1.6e-104 383.3 261 70.9
Oeu049828.1 Olea europaea HOM05D005536 ORTHO05D006999 1.6e-104 383.3 257 72.4
Glyma.12G169900 Glycine max HOM05D005536 ORTHO05D006999 2.1e-104 382.9 261 70.5
CAN.G798.23 Capsicum annuum HOM05D005536 ORTHO05D006999 3.5e-104 382.1 265 70.6
Cc02_g22780 Coffea canephora HOM05D005536 ORTHO05D006999 3.5e-104 382.1 260 70.4
Peaxi162Scf00011g00635 Petunia axillaris HOM05D005536 ORTHO05D006999 4.6e-104 381.7 265 70.6
BcaC05g26200 Brassica carinata HOM05D005536 ORTHO05D006999 6.0e-104 381.3 267 71.5
C05p22080 Brassica napus HOM05D005536 ORTHO05D006999 6.0e-104 381.3 267 71.5
Potri.003G015700 Populus trichocarpa HOM05D005536 ORTHO05D006999 7.8e-104 380.9 264 71.2
Zm00001eb138710 Zea mays HOM05D005536 ORTHO05D006999 7.8e-104 380.9 260 71.5
BcaB07g32292 Brassica carinata HOM05D005536 ORTHO05D006999 1.3e-103 380.2 268 71.3
A09p41800 Brassica napus HOM05D005536 ORTHO05D006999 3.0e-103 379.0 267 70.8
Solyc01g103950.4 Solanum lycopersicum HOM05D005536 ORTHO05D006999 3.0e-103 379.0 265 69.4
Aa31LG7G6950 Aethionema arabicum HOM05D005536 ORTHO05D006999 3.9e-103 378.6 265 69.4
CsaV3_5G012850 Cucumis sativus L. HOM05D005536 ORTHO05D006999 3.9e-103 378.6 263 70.3
BolC5t30904H Brassica oleracea HOM05D005536 ORTHO05D006999 5.1e-103 378.3 267 70.8
BraA09t39668Z Brassica rapa HOM05D005536 ORTHO05D006999 6.6e-103 377.9 267 70.4
Sed0010884 Sechium edule HOM05D005536 ORTHO05D006999 6.6e-103 377.9 268 70.1
SalBow8G1128 Salvia bowleyana HOM05D005536 ORTHO05D004100 8.6e-103 377.5 267 69.3
DCAR_025347 Daucus carota HOM05D005536 ORTHO05D006999 1.9e-102 376.3 267 67.8
PGSC0003DMG401023772 Solanum tuberosum HOM05D005536 ORTHO05D006999 1.9e-102 376.3 265 68.7
Sopen01g046340 Solanum pennellii HOM05D005536 ORTHO05D006999 3.3e-102 375.6 265 69.1
CDE04G3554 Ceratophyllum demersum HOM05D005536 ORTHO05D006999 4.3e-102 375.2 260 67.7
Nitab4.5_0002698g0120 Nicotiana tabacum HOM05D005536 ORTHO05D006999 4.3e-102 375.2 265 68.7
CSS0004244 Camellia sinensis var. sinensis HOM05D005536 ORTHO05D006999 7.3e-102 374.4 229 77.3
Sp1g20400 Schrenkiella parvula HOM05D005536 ORTHO05D006999 7.3e-102 374.4 268 69.4
Zm00001eb264810 Zea mays HOM05D005536 ORTHO05D006999 7.3e-102 374.4 264 69.3
Nitab4.5_0000948g0240 Nicotiana tabacum HOM05D005536 ORTHO05D006999 1.6e-101 373.2 265 68.7
Migut.B00813 Erythranthe guttata HOM05D005536 ORTHO05D006999 4.7e-101 371.7 265 66.8
MSTRG.20308 Avicennia marina HOM05D005536 ORTHO05D006999 1.4e-100 370.2 260 66.5
unitig_749.g13511 Utricularia gibba HOM05D005536 ORTHO05D006999 3.4e-99 365.5 263 66.2
THA.LOC104806870 Tarenaya hassleriana HOM05D005536 ORTHO05D006999 1.1e-97 360.5 261 68.2
ATR1136G209 Amborella trichopoda HOM05D005536 ORTHO05D006999 4.2e-97 358.6 261 67.0
SEGI_00443 Sequoiadendron giganteum HOM05D005536 ORTHO05D006999 2.4e-92 342.8 260 64.2
SGA_v2.0_scaffold110G31339 Striga asiatica HOM05D005536 ORTHO05D006999 1.2e-88 330.5 322 54.3
HPP92_027057 Vanilla planifolia HOM05D005536 ORTHO05D006999 1.9e-86 323.2 261 59.8
HPP92_011418 Vanilla planifolia HOM05D005536 ORTHO05D006999 4.9e-82 308.5 237 61.6
Pp3c1_39340 Physcomitrium patens HOM05D005536 ORTHO05D006999 1.1e-78 297.4 262 55.3
AagrBONN_evm.TU.Sc2ySwM_228.4801 Anthoceros agrestis HOM05D005536 ORTHO05D006999 7.4e-78 294.7 262 57.3
SMO244G0051 Selaginella moellendorffii HOM05D005536 ORTHO05D006999 4.8e-77 292.0 263 54.8
Mapoly0071s0067 Marchantia polymorpha HOM05D005536 ORTHO05D006999 1.4e-76 290.4 261 57.1
Cpa.g.c34456.1 Carica papaya HOM05D005536 ORTHO05D006999 3.1e-68 262.7 171 74.3
PGR044G0806 Punica granatum HOM05D005536 ORTHO05D006999 2.2e-58 229.9 152 74.3
MD08G1236400 Malus domestica HOM05D005536 ORTHO05D006999 1.6e-56 223.8 184 60.9
Actinidia27730 Actinidia chinensis HOM05D005536 ORTHO05D006999 3.0e-55 219.5 151 67.5
EL10Ac6g14966 Beta vulgaris HOM05D005536 ORTHO05D006999 3.8e-50 202.6 123 80.5
Cre08.g365600 Chlamydomonas reinhardtii HOM05D005536 ORTHO05D006999 1.9e-49 200.3 209 51.7
CBR_g6345 Chara braunii HOM05D005536 ORTHO05D006999 2.5e-41 173.3 155 57.4
Actinidia00197 Actinidia chinensis HOM05D005536 ORTHO05D006999 1.6e-40 170.6 126 65.1
Hma1.2p1_1108F.1_g257730 Hydrangea macrophylla HOM05D005536 ORTHO05D006999 1.5e-33 147.5 92 73.9
Cfa024720 Carpinus fangiana HOM05D005536 ORTHO05D006999 8.0e-32 141.7 198 42.4
Cpa.g.sc31.109 Carica papaya HOM05D005536 ORTHO05D006999 4.0e-31 139.4 102 68.6
CsaV3_5G012690 Cucumis sativus L. HOM05D005536 ORTHO05D006999 6.8e-31 138.7 172 46.5
Hma1.2p1_3213F.1_g334040 Hydrangea macrophylla HOM05D005536 ORTHO05D006999 3.4e-30 136.3 103 65.0
Cpa.g.sc31.103 Carica papaya HOM05D005536 ORTHO05D006999 1.6e-27 127.5 112 58.0
Ca_00038_v3 Cicer arietinum L. HOM05D005536 ORTHO05D006999 1.7e-26 124.0 91 65.9
Actinidia27729 Actinidia chinensis HOM05D005536 ORTHO05D006999 5.5e-25 119.0 83 67.5
Actinidia02850 Actinidia chinensis HOM05D005536 ORTHO05D006999 4.4e-22 109.4 158 41.1
ECA236G5131 Erigeron canadensis HOM05D005536 ORTHO05D006999 1.0e-18 98.2 61 75.4
CBR_g6347 Chara braunii HOM05D000019 ORTHO05D000800 1.6e-16 90.9 122 41.8
CsaV3_5G012700 Cucumis sativus L. HOM05D005536 ORTHO05D006999 1.0e-15 88.2 92 51.1
Haze_27076 Corylus avellana HOM05D005536 ORTHO05D006999 6.6e-10 68.9 110 38.2
Medtr2g006225 Medicago truncatula HOM05D005536 ORTHO05D266164 8.9e-07 58.5 74 45.9


User provided reference genes

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