Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund11856 Selenicereus undatus HOM05D006635 ORTHO05D008047 9.0e-137 490.3 264 100.0
Sc19g0003750 Simmondsia chinensis HOM05D006635 ORTHO05D008047 5.5e-86 321.6 261 64.0
Sc19g0005210 Simmondsia chinensis HOM05D006635 ORTHO05D008047 2.1e-85 319.7 261 64.0
AUR62002251 Chenopodium quinoa HOM05D006635 ORTHO05D008047 2.0e-83 313.2 231 69.7
GSVIVG01018125001 Vitis vinifera HOM05D006635 ORTHO05D008047 2.9e-79 299.3 250 60.4
Haze_11307 Corylus avellana HOM05D006635 ORTHO05D008047 3.8e-79 298.9 252 61.9
Ah.13g066120 Amaranthus hybridus HOM05D006635 ORTHO05D008047 6.6e-79 298.1 237 64.6
Gohir.D10G153800 Gossypium hirsutum HOM05D006635 ORTHO05D008047 6.6e-79 298.1 265 59.2
Gorai.011G171700 Gossypium raimondii HOM05D006635 ORTHO05D008047 6.6e-79 298.1 265 59.2
Nitab4.5_0000302g0050 Nicotiana tabacum HOM05D006635 ORTHO05D008047 1.1e-78 297.4 267 60.7
Haze_11310 Corylus avellana HOM05D006635 ORTHO05D008047 1.5e-78 297.0 252 61.5
Gohir.A10G113600 Gossypium hirsutum HOM05D006635 ORTHO05D008047 1.9e-78 296.6 265 59.2
Atru.chr4.2211 Acer truncatum HOM05D006635 ORTHO05D008047 3.3e-78 295.8 266 57.5
TWI53G1330 Tripterygium wilfordii HOM05D006635 ORTHO05D008047 5.6e-78 295.0 252 61.9
TWI53G1448 Tripterygium wilfordii HOM05D006635 ORTHO05D008047 5.6e-78 295.0 252 61.9
MD13G1208000 Malus domestica HOM05D006635 ORTHO05D008047 9.5e-78 294.3 261 59.0
CiPaw.01G189900 Carya illinoinensis HOM05D006635 ORTHO05D008047 1.2e-77 293.9 252 61.9
CAN.G118.6 Capsicum annuum HOM05D006635 ORTHO05D008047 1.6e-77 293.5 257 61.1
Cc03_g04920 Coffea canephora HOM05D006635 ORTHO05D008047 2.1e-77 293.1 262 60.3
Ciclev10005689m.g Citrus clementina HOM05D006635 ORTHO05D008047 2.8e-77 292.7 257 58.8
Prupe.1G031500 Prunus persica HOM05D006635 ORTHO05D008047 4.7e-77 292.0 250 60.8
Ciclev10005690m.g Citrus clementina HOM05D006635 ORTHO05D008047 6.1e-77 291.6 253 59.7
Hma1.2p1_0650F.1_g195460 Hydrangea macrophylla HOM05D006635 ORTHO05D008047 8.0e-77 291.2 247 62.3
RcHm_v2.0_Chr1g0323991 Rosa chinensis HOM05D006635 ORTHO05D008047 8.0e-77 291.2 253 60.1
Thecc.04G246700 Theobroma cacao HOM05D006635 ORTHO05D008047 8.0e-77 291.2 267 59.2
arahy.Tifrunner.gnm1.ann1.P8HXAC Arachis hypogaea HOM05D006635 ORTHO05D008047 1.8e-76 290.0 252 59.9
Lj5g0017333 Lotus japonicus HOM05D006635 ORTHO05D008047 1.8e-76 290.0 253 58.9
arahy.Tifrunner.gnm1.ann1.20YP49 Arachis hypogaea HOM05D006635 ORTHO05D008047 4.0e-76 288.9 252 59.9
Manes.15G037200 Manihot esculenta HOM05D006635 ORTHO05D008047 4.0e-76 288.9 255 58.4
Cfa008372 Carpinus fangiana HOM05D003636 ORTHO05D005160 5.2e-76 288.5 238 62.6
Sopen06g018890 Solanum pennellii HOM05D006635 ORTHO05D008047 5.2e-76 288.5 252 61.1
CANSAT78G1035 Cannabis sativa HOM05D006635 ORTHO05D008047 8.9e-76 287.7 255 59.6
FvH4_2g07190 Fragaria vesca HOM05D006635 ORTHO05D008047 1.2e-75 287.3 251 59.8
FAN24G3344 Fragaria x ananassa HOM05D006635 ORTHO05D008047 1.5e-75 287.0 251 59.8
PGSC0003DMG400016282 Solanum tuberosum HOM05D006635 ORTHO05D008047 1.5e-75 287.0 239 62.8
Migut.G00439 Erythranthe guttata HOM05D006635 ORTHO05D008047 2.0e-75 286.6 257 59.9
FAN20G2319 Fragaria x ananassa HOM05D006635 ORTHO05D008047 2.0e-75 286.6 251 59.4
DCAR_027282 Daucus carota HOM05D006635 ORTHO05D008047 2.6e-75 286.2 239 61.5
Lalb_Chr02g0150381 Lupinus albus HOM05D006635 ORTHO05D008047 4.4e-75 285.4 258 56.6
CSS0008878 Camellia sinensis var. sinensis HOM05D006635 ORTHO05D008047 5.7e-75 285.0 256 60.5
Cpa.g.sc58.53 Carica papaya HOM05D006635 ORTHO05D008047 9.8e-75 284.3 216 67.6
Potri.010G075900 Populus trichocarpa HOM05D006635 ORTHO05D008047 9.8e-75 284.3 258 58.1
Aqoxy5G00314 Aquilegia oxysepala HOM05D006635 ORTHO05D008047 1.3e-74 283.9 254 58.7
Dinv29905 Davidia involucrata HOM05D006635 ORTHO05D008047 2.9e-74 282.7 260 59.2
Solyc06g053770.4 Solanum lycopersicum HOM05D006635 ORTHO05D008047 4.9e-74 282.0 252 60.7
COL.COLO4_15799 Corchorus olitorius HOM05D006635 ORTHO05D008047 8.3e-74 281.2 232 62.1
MSTRG.4101 Avicennia marina HOM05D006635 ORTHO05D008047 1.4e-73 280.4 210 65.2
EL10Ac3g05891 Beta vulgaris HOM05D006635 ORTHO05D008047 3.2e-73 279.3 262 60.7
Ciclev10007171m.g Citrus clementina HOM05D006635 ORTHO05D008047 9.2e-73 277.7 238 60.1
Nitab4.5_0008721g0010 Nicotiana tabacum HOM05D006635 ORTHO05D008047 9.2e-73 277.7 207 67.1
Nn1g02620 Nelumbo nucifera HOM05D006635 ORTHO05D008047 2.0e-72 276.6 284 54.2
Eucgr.H03153 Eucalyptus grandis HOM05D006635 ORTHO05D008047 4.6e-72 275.4 262 56.9
PGR004G0241 Punica granatum HOM05D006635 ORTHO05D008047 1.3e-71 273.9 255 56.9
FAN27G3431 Fragaria x ananassa HOM05D006635 ORTHO05D008047 5.0e-71 271.9 290 52.8
Lj6A657T45 Lonicera japonica HOM05D006635 ORTHO05D008047 6.6e-71 271.6 214 62.1
Actinidia08441 Actinidia chinensis HOM05D006635 ORTHO05D008047 8.6e-71 271.2 239 60.7
Medtr1g075330 Medicago truncatula HOM05D006635 ORTHO05D008047 1.1e-70 270.8 251 57.0
PSO832G2723 Papaver somniferum HOM05D006635 ORTHO05D008047 2.5e-70 269.6 256 56.6
PSO210G4915 Papaver somniferum HOM05D006635 ORTHO05D008047 5.6e-70 268.5 256 56.2
HanXRQChr13g0424511 Helianthus annuus HOM05D006635 ORTHO05D008047 2.1e-69 266.5 244 56.6
ECA240G1129 Erigeron canadensis HOM05D000856 ORTHO05D002253 4.7e-69 265.4 252 55.6
vmacro15410 Vaccinium macrocarpon HOM05D006635 ORTHO05D008047 1.0e-68 264.2 302 50.7
Ca_09839_v3 Cicer arietinum L. HOM05D006635 ORTHO05D008047 4.0e-68 262.3 252 54.8
THA.LOC104808600 Tarenaya hassleriana HOM05D006635 ORTHO05D008047 5.2e-68 261.9 254 56.7
AL3G37550 Arabidopsis lyrata HOM05D006635 ORTHO05D008047 8.9e-68 261.2 258 55.4
Oeu058885.1 Olea europaea HOM05D006635 ORTHO05D008047 1.2e-67 260.8 271 51.7
HPP92_023529 Vanilla planifolia HOM05D006635 ORTHO05D008047 1.3e-66 257.3 236 55.5
Sed0017322 Sechium edule HOM05D006635 ORTHO05D008047 2.2e-66 256.5 221 58.8
Psat4g107880 Pisum sativum HOM05D006635 ORTHO05D008047 2.9e-66 256.1 238 55.9
CsaV3_7G006710 Cucumis sativus L. HOM05D006635 ORTHO05D008047 4.9e-66 255.4 225 57.8
Glyma.10G184800 Glycine max HOM05D006635 ORTHO05D008047 8.3e-66 254.6 258 52.3
QL06p015844 Quercus lobata HOM05D006635 ORTHO05D008047 1.4e-65 253.8 347 44.4
Carub.0003s2327 Capsella rubella HOM05D006635 ORTHO05D008047 5.4e-65 251.9 255 54.9
Sp3g20780 Schrenkiella parvula HOM05D006635 ORTHO05D008047 1.6e-64 250.4 254 53.9
CARHR099010 Cardamine hirsuta HOM05D006635 ORTHO05D008047 2.0e-64 250.0 258 53.9
MELO3C018624.2 Cucumis melo HOM05D006635 ORTHO05D008047 6.0e-64 248.4 231 55.8
CDE04G0173 Ceratophyllum demersum HOM05D006635 ORTHO05D008047 1.0e-63 247.7 251 54.6
AT3G23100 Arabidopsis thaliana HOM05D006635 ORTHO05D008047 1.7e-63 246.9 258 53.1
Glyma.20G205600 Glycine max HOM05D006635 ORTHO05D008047 3.0e-63 246.1 248 51.6
BcaC09g49245 Brassica carinata HOM05D006635 ORTHO05D008047 3.9e-63 245.7 258 52.7
Duzib151G0047 Durio zibethinus HOM05D006635 ORTHO05D008047 3.9e-63 245.7 248 54.4
ClCG09G015590 Citrullus lanatus HOM05D006635 ORTHO05D008047 1.1e-62 244.2 238 54.6
BcaB04g20471 Brassica carinata HOM05D006635 ORTHO05D008047 1.5e-62 243.8 196 59.7
Phvul.007G125600 Phaseolus vulgaris HOM05D006635 ORTHO05D008047 1.5e-62 243.8 253 50.6
Os03g0740800 Oryza sativa ssp. japonica HOM05D006635 ORTHO05D008047 4.0e-60 235.7 261 48.7
A01p31980 Brassica napus HOM05D006635 ORTHO05D008047 1.5e-59 233.8 205 57.1
BraA01t03324Z Brassica rapa HOM05D006635 ORTHO05D008047 1.5e-59 233.8 205 57.1
ATR0824G049 Amborella trichopoda HOM05D006635 ORTHO05D008047 4.4e-59 232.3 222 53.2
VMungo0720G1578 Vigna mungo HOM05D006635 ORTHO05D008047 2.2e-58 229.9 258 48.1
Peaxi162Scf00325g00713 Petunia axillaris HOM05D006635 ORTHO05D008047 2.9e-58 229.6 270 50.4
Zm00001eb056730 Zea mays HOM05D006635 ORTHO05D008047 5.4e-57 225.3 268 46.6
CSS0031458 Camellia sinensis var. sinensis HOM05D006635 ORTHO05D008047 4.6e-56 222.2 282 47.9
Sabra10G0032800 Salix brachista HOM05D006635 ORTHO05D008047 2.3e-55 219.9 135 73.3
BolC1t04048H Brassica oleracea HOM05D006635 ORTHO05D008047 2.5e-54 216.5 177 58.8
Aa31LG8G9580 Aethionema arabicum HOM05D006635 ORTHO05D008047 1.2e-53 214.2 275 47.6
Thhalv10022194m.g Eutrema salsugineum HOM05D006635 ORTHO05D008047 2.4e-49 199.9 258 46.1
MBI19_g38372_MAGBIO Magnolia biondii HOM05D006635 ORTHO05D008047 3.2e-49 199.5 257 48.2
Lsat_1_v5_gn_3_122920 Lactuca sativa HOM05D006635 ORTHO05D008047 7.1e-49 198.4 222 51.4
C01p40990 Brassica napus HOM05D006635 ORTHO05D008047 9.2e-49 198.0 136 66.2
PGR004G0922 Punica granatum HOM05D006635 ORTHO05D008047 1.2e-43 181.0 146 59.6
PGR102G1543 Punica granatum HOM05D006635 ORTHO05D008047 1.0e-39 167.9 256 41.0
PGR083G1020 Punica granatum HOM05D006635 ORTHO05D008047 1.3e-37 161.0 256 42.2
Mapoly0014s0074 Marchantia polymorpha HOM05D006635 ORTHO05D008047 1.1e-33 147.9 229 36.2
AUR62015462 Chenopodium quinoa HOM05D006635 ORTHO05D008047 1.2e-32 144.4 159 54.7
TAR636G2119 Trochodendron aralioides HOM05D006635 ORTHO05D008047 1.1e-30 137.9 94 66.0
AagrBONN_evm.TU.Sc2ySwM_228.5661 Anthoceros agrestis HOM05D006635 ORTHO05D008047 4.8e-29 132.5 228 35.5
TPR.G27195 Trifolium pratense HOM05D006635 ORTHO05D008047 1.1e-28 131.3 89 65.2
Ciclev10029925m.g Citrus clementina HOM05D006635 ORTHO05D008047 5.8e-27 125.6 132 50.8
Pp3c1_38430 Physcomitrium patens HOM05D006635 ORTHO05D008047 6.2e-21 105.5 251 31.9
Pp3c14_21160 Physcomitrium patens HOM05D006635 ORTHO05D008047 1.1e-20 104.8 217 32.3
SEGI_11171 Sequoiadendron giganteum HOM05D006635 ORTHO05D008047 1.8e-20 104.0 88 55.7
TAR636G0517 Trochodendron aralioides HOM05D006635 ORTHO05D008047 1.2e-16 91.3 122 48.4
CBR_g33918 Chara braunii HOM05D006635 ORTHO05D008047 9.6e-14 81.6 186 30.6
C01p40970 Brassica napus HOM05D006635 ORTHO05D008047 1.0e-10 71.6 54 57.4
MBI19_g44428_MAGBIO Magnolia biondii HOM05D006635 ORTHO05D008047 3.8e-10 69.7 47 66.0
AT1G61410 Arabidopsis thaliana HOM05D006635 ORTHO05D008047 1.1e-09 68.2 130 43.1
Oeu058884.1 Olea europaea HOM05D001680 ORTHO05D001596 5.5e-09 65.9 107 40.2
Pp3c10_9830 Physcomitrium patens HOM05D000160 ORTHO05D000496 7.2e-09 65.5 129 31.8
Pp3c19_13839 Physcomitrium patens HOM05D006635 ORTHO05D008047 1.6e-08 64.3 107 37.4
Pp3c13_7410 Physcomitrium patens HOM05D000160 ORTHO05D000496 4.6e-08 62.8 145 30.3
Pp3c3_5070 Physcomitrium patens HOM05D000160 ORTHO05D000496 4.6e-08 62.8 124 30.6
unitig_747.g21677 Utricularia gibba HOM05D006635 ORTHO05D008047 1.3e-07 61.2 52 50.0
SEGI_02340 Sequoiadendron giganteum HOM05D006635 ORTHO05D008047 1.5e-06 57.8 83 45.8


User provided reference genes

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