Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_0701F.1_g205860 Hydrangea macrophylla HOM05D001734 ORTHO05D003483 2.3e-282 974.9 498 100.0
Dinv20652 Davidia involucrata HOM05D001734 ORTHO05D003483 6.1e-195 684.5 506 71.3
CSS0012833 Camellia sinensis var. sinensis HOM05D001734 ORTHO05D003483 1.4e-170 603.6 514 61.5
Actinidia19322 Actinidia chinensis HOM05D001734 ORTHO05D003483 8.4e-160 567.8 514 58.4
Rhsim08G0172200 Rhododendron simsii HOM05D001734 ORTHO05D003483 1.4e-159 567.0 514 59.3
GSVIVG01007755001 Vitis vinifera HOM05D001734 ORTHO05D003483 5.1e-149 531.9 509 54.4
Cfa019134 Carpinus fangiana HOM05D001734 ORTHO05D003483 2.7e-142 509.6 509 55.0
QL10p011601 Quercus lobata HOM05D001734 ORTHO05D003483 1.5e-140 503.8 558 50.2
vmacro19388 Vaccinium macrocarpon HOM05D001734 ORTHO05D003483 6.2e-139 498.4 525 53.9
Atru.chr9.2479 Acer truncatum HOM05D001734 ORTHO05D003483 1.5e-137 493.8 508 52.2
Haze_07473 Corylus avellana HOM05D001734 ORTHO05D003483 7.1e-135 485.0 498 54.4
CiPaw.11G026100 Carya illinoinensis HOM05D001734 ORTHO05D003483 1.2e-134 484.2 509 51.9
Lj9A448G32 Lonicera japonica HOM05D001734 ORTHO05D003483 6.7e-133 478.4 508 52.8
Potri.015G076650 Populus trichocarpa HOM05D001734 ORTHO05D003483 4.1e-130 469.2 508 50.4
Cc04_g14140 Coffea canephora HOM05D001734 ORTHO05D003483 1.5e-129 467.2 507 49.1
Prupe.5G173600 Prunus persica HOM05D001734 ORTHO05D003483 1.6e-126 457.2 509 50.7
Migut.I00009 Erythranthe guttata HOM05D001734 ORTHO05D003483 2.7e-126 456.4 505 47.5
Ciclev10018427m.g Citrus clementina HOM05D001734 ORTHO05D003483 6.1e-126 455.3 507 49.5
Nitab4.5_0000785g0010 Nicotiana tabacum HOM05D001734 ORTHO05D003483 6.7e-125 451.8 507 48.5
Oeu016387.4 Olea europaea HOM05D001734 ORTHO05D003483 6.7e-125 451.8 505 49.5
Nitab4.5_0000984g0090 Nicotiana tabacum HOM05D001734 ORTHO05D003483 1.1e-122 444.5 508 48.6
MD06G1173700 Malus domestica HOM05D001734 ORTHO05D003483 5.3e-122 442.2 508 49.4
Thecc.03G012800 Theobroma cacao HOM05D001734 ORTHO05D003483 5.3e-122 442.2 509 49.5
Manes.06G105000 Manihot esculenta HOM05D001734 ORTHO05D003483 9.0e-122 441.4 508 48.0
Duzib084G0583 Durio zibethinus HOM05D001734 ORTHO05D003483 1.5e-121 440.7 523 48.8
Sopen03g032020 Solanum pennellii HOM05D001734 ORTHO05D003483 1.0e-120 438.0 509 47.3
Gorai.006G189100 Gossypium raimondii HOM05D001734 ORTHO05D003483 6.5e-120 435.3 509 48.7
Gohir.D09G167401 Gossypium hirsutum HOM05D001734 ORTHO05D003483 8.5e-120 434.9 509 48.7
Gohir.A09G171700 Gossypium hirsutum HOM05D001734 ORTHO05D003483 1.9e-119 433.7 509 48.5
HanXRQChr02g0036361 Helianthus annuus HOM05D001734 ORTHO05D003483 1.9e-119 433.7 524 47.5
COL.COLO4_30039 Corchorus olitorius HOM05D001734 ORTHO05D003483 1.6e-118 430.6 509 48.9
CANSAT80G1574 Cannabis sativa HOM05D001734 ORTHO05D003483 3.6e-118 429.5 510 48.8
Sabra15G0101700 Salix brachista HOM05D001734 ORTHO05D003483 8.8e-117 424.9 548 44.9
Nn4g22757 Nelumbo nucifera HOM05D001734 ORTHO05D003483 3.1e-114 416.4 510 47.8
RcHm_v2.0_Chr6g0271131 Rosa chinensis HOM05D001734 ORTHO05D003483 6.9e-114 415.2 505 47.1
TWI14G0283 Tripterygium wilfordii HOM05D001734 ORTHO05D003483 2.0e-113 413.7 508 45.7
ECA247G1446 Erigeron canadensis HOM05D001734 ORTHO05D003483 2.6e-113 413.3 524 44.5
MSTRG.11455 Avicennia marina HOM05D001734 ORTHO05D003483 7.7e-113 411.8 505 42.6
SGA_v2.0_scaffold90G27914 Striga asiatica HOM05D001734 ORTHO05D003483 1.7e-112 410.6 509 45.0
SalBow5G1563 Salvia bowleyana HOM05D001734 ORTHO05D003483 2.9e-112 409.8 505 44.0
Rhsim08G0157900 Rhododendron simsii HOM05D001734 ORTHO05D003483 6.1e-110 402.1 548 46.5
FvH4_2g11670 Fragaria vesca HOM05D001734 ORTHO05D003483 1.3e-107 394.4 508 44.7
Peaxi162Scf00009g00112 Petunia axillaris HOM05D001734 ORTHO05D003483 2.4e-106 390.2 526 43.9
Lalb_Chr08g0236501 Lupinus albus HOM05D001734 ORTHO05D003483 4.1e-106 389.4 508 45.3
DCAR_026136 Daucus carota HOM05D001734 ORTHO05D003483 7.0e-106 388.7 509 45.0
PSO063G0326 Papaver somniferum HOM05D001734 ORTHO05D003483 1.6e-105 387.5 511 45.0
FAN15G3378 Fragaria x ananassa HOM05D001734 ORTHO05D003483 5.9e-105 385.6 509 44.4
Glyma.04G182900 Glycine max HOM05D001734 ORTHO05D003483 4.2e-103 379.4 505 43.8
PSO063G7150 Papaver somniferum HOM05D001734 ORTHO05D003483 1.2e-102 377.9 511 44.6
Aqoxy3G02937 Aquilegia oxysepala HOM05D001734 ORTHO05D003483 2.1e-102 377.1 508 42.7
Sc04g0001800 Simmondsia chinensis HOM05D001734 ORTHO05D003483 4.0e-101 372.9 510 43.5
PGR044G0033 Punica granatum HOM05D001734 ORTHO05D003483 8.8e-101 371.7 509 43.0
FAN24G1896 Fragaria x ananassa HOM05D001734 ORTHO05D003483 2.0e-100 370.5 497 43.9
VMungo1309G2093 Vigna mungo HOM05D001734 ORTHO05D003483 9.7e-100 368.2 523 41.7
FAN05G4580 Fragaria x ananassa HOM05D001734 ORTHO05D003483 2.8e-99 366.7 497 43.3
Lsat_1_v5_gn_1_27061 Lactuca sativa HOM05D001734 ORTHO05D003483 9.1e-98 361.7 523 43.0
Sed0023277 Sechium edule HOM05D001734 ORTHO05D003483 1.3e-96 357.8 508 42.1
CAN.G1305.19 Capsicum annuum HOM05D001734 ORTHO05D003483 1.5e-95 354.4 389 49.1
Phvul.009G178400 Phaseolus vulgaris HOM05D001734 ORTHO05D003483 1.4e-93 347.8 507 41.4
MELO3C017087.2 Cucumis melo HOM05D001734 ORTHO05D003483 1.8e-93 347.4 508 41.5
CsaV3_1G001470 Cucumis sativus L. HOM05D001734 ORTHO05D003483 2.6e-92 343.6 508 41.9
Eucgr.K02842 Eucalyptus grandis HOM05D001734 ORTHO05D003483 3.4e-92 343.2 516 40.7
Lj1g0011912 Lotus japonicus HOM05D001734 ORTHO05D003483 3.4e-92 343.2 506 42.3
Medtr3g077860 Medicago truncatula HOM05D001734 ORTHO05D003483 1.7e-91 340.9 505 40.4
arahy.Tifrunner.gnm1.ann1.2D0TBT Arachis hypogaea HOM05D001734 ORTHO05D003483 3.1e-90 336.7 509 39.9
ClCG06G017040 Citrullus lanatus HOM05D001734 ORTHO05D003483 1.6e-89 334.3 532 40.4
AT3G48190 Arabidopsis thaliana HOM05D001734 ORTHO05D003483 6.1e-86 322.4 508 40.6
EL10Ac5g10743 Beta vulgaris HOM05D001734 ORTHO05D003483 6.1e-86 322.4 486 38.9
Sp5g13840 Schrenkiella parvula HOM05D001734 ORTHO05D003483 8.3e-83 312.0 509 38.9
THA.LOC104818218 Tarenaya hassleriana HOM05D001734 ORTHO05D003483 3.1e-82 310.1 506 37.5
Carub.0005s1431 Capsella rubella HOM05D001734 ORTHO05D003483 9.2e-82 308.5 508 39.4
CARHR156920 Cardamine hirsuta HOM05D001734 ORTHO05D003483 1.6e-81 307.8 511 39.3
C03p66700 Brassica napus HOM05D001734 ORTHO05D003483 2.3e-80 303.9 507 39.1
BolC3t18938H Brassica oleracea HOM05D001734 ORTHO05D003483 2.3e-80 303.9 507 39.1
Thhalv10010050m.g Eutrema salsugineum HOM05D001734 ORTHO05D003483 3.3e-79 300.1 510 38.6
A06p27460 Brassica napus HOM05D001734 ORTHO05D003483 5.6e-79 299.3 509 38.9
BraA06t25686Z Brassica rapa HOM05D001734 ORTHO05D003483 5.6e-79 299.3 509 38.9
AL5G27530 Arabidopsis lyrata HOM05D001734 ORTHO05D003483 7.3e-79 298.9 507 39.3
Aa31LG4G16790 Aethionema arabicum HOM05D001734 ORTHO05D003483 8.0e-78 295.4 538 37.2
TPR.G6035 Trifolium pratense HOM05D001734 ORTHO05D003483 3.0e-77 293.5 503 37.2
AUR62008208 Chenopodium quinoa HOM05D001734 ORTHO05D003483 3.9e-72 276.6 366 41.5
ATR0730G231 Amborella trichopoda HOM05D001734 ORTHO05D003483 8.0e-70 268.9 508 36.0
AUR62030960 Chenopodium quinoa HOM05D001734 ORTHO05D003483 2.3e-69 267.3 366 41.0
Cpa.g.sc76.49 Carica papaya HOM05D001734 ORTHO05D003483 1.8e-61 241.1 290 46.2
Zm00001eb126710 Zea mays HOM05D001734 ORTHO05D003483 4.9e-51 206.5 515 30.1
CDE07G1059 Ceratophyllum demersum HOM05D001734 ORTHO05D003483 2.4e-50 204.1 466 33.3
Os01g0106700 Oryza sativa ssp. japonica HOM05D001734 ORTHO05D003483 2.3e-48 197.6 516 30.2
HPP92_004845 Vanilla planifolia HOM05D002152 ORTHO05D003483 2.1e-46 191.0 493 29.2
QL01p024072 Quercus lobata HOM05D001734 ORTHO05D020518 4.3e-31 140.2 193 44.6
Ca_05696_v3 Cicer arietinum L. HOM05D001734 ORTHO05D003483 3.4e-28 130.6 185 42.7
QL07p004594 Quercus lobata HOM05D001734 ORTHO05D020518 1.3e-22 112.1 118 53.4
SHI17005 Sapria himalayana HOM05D001734 ORTHO05D003483 3.1e-21 107.5 231 32.9
SHI17006 Sapria himalayana HOM05D001734 ORTHO05D020518 6.9e-21 106.3 137 43.8
Mapoly0081s0051 Marchantia polymorpha HOM05D001734 ORTHO05D003483 4.5e-20 103.6 205 31.7
Pp3c2_23700 Physcomitrium patens HOM05D001734 ORTHO05D003483 7.6e-20 102.8 535 25.2
TAR629G2960 Trochodendron aralioides HOM05D001734 ORTHO05D003483 3.0e-16 90.9 100 48.0
TPR.G29226 Trifolium pratense HOM05D001734 ORTHO05D003483 1.5e-15 88.6 92 51.1
SHI17004 Sapria himalayana HOM05D001734 ORTHO05D020992 3.3e-15 87.4 80 56.2
QL07p004610 Quercus lobata HOM05D001734 ORTHO05D020518 3.7e-14 84.0 118 45.8
AagrBONN_evm.TU.Sc2ySwM_117.1596 Anthoceros agrestis HOM05D001734 ORTHO05D003483 1.4e-13 82.0 533 23.1
Ca_16176_v3 Cicer arietinum L. HOM05D001734 ORTHO05D003483 1.8e-13 81.6 66 59.1
BcaNung06699 Brassica carinata HOM05D001734 ORTHO05D003483 5.0e-11 73.6 136 38.2
unitig_0.g1441 Utricularia gibba HOM05D001734 ORTHO05D003483 3.2e-10 70.9 74 40.5
QL01p024955 Quercus lobata HOM05D001734 ORTHO05D020518 3.6e-09 67.4 64 54.7
SEGI_10258 Sequoiadendron giganteum HOM05D001734 ORTHO05D003483 4.6e-09 67.0 267 24.7
Lsat_1_v5_gn_6_39261 Lactuca sativa HOM05D001734 ORTHO05D020518 5.1e-08 63.5 54 57.4
SEGI_30734 Sequoiadendron giganteum HOM05D001734 ORTHO05D003483 6.7e-08 63.2 42 57.1
Sopen12g024730 Solanum pennellii HOM05D035692 ORTHO05D020992 7.4e-07 59.7 64 51.6


User provided reference genes

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