Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_0192F.1_g083610 Hydrangea macrophylla HOM05D006053 ORTHO05D008381 1.0e-88 330.5 229 100.0
Hma1.2p1_0192F.1_g083600 Hydrangea macrophylla HOM05D006053 ORTHO05D008381 1.3e-78 297.0 243 90.5
Dinv25975 Davidia involucrata HOM05D006053 ORTHO05D008381 1.2e-41 174.1 247 59.1
CSS0026153 Camellia sinensis var. sinensis HOM05D006053 ORTHO05D008381 2.1e-33 146.7 259 57.5
TAR623G1578 Trochodendron aralioides HOM05D006053 ORTHO05D008381 8.9e-32 141.4 243 46.1
Lj8C88T8 Lonicera japonica HOM05D006053 ORTHO05D008381 9.8e-31 137.9 241 56.8
MBI05_g35605_MAGBIO Magnolia biondii HOM05D006053 ORTHO05D008381 4.6e-28 129.0 241 49.4
HanXRQChr09g0247701 Helianthus annuus HOM05D006053 ORTHO05D008381 6.0e-28 128.6 230 59.1
VMungo0720G3082 Vigna mungo HOM05D006053 ORTHO05D008381 7.8e-28 128.3 230 51.7
Cc02_g08350 Coffea canephora HOM05D006053 ORTHO05D008381 1.0e-27 127.9 243 52.3
Actinidia02973 Actinidia chinensis HOM05D006053 ORTHO05D008381 1.7e-27 127.1 248 51.2
Nitab4.5_0001277g0050 Nicotiana tabacum HOM05D006053 ORTHO05D008381 1.7e-27 127.1 229 49.3
Nitab4.5_0000120g0180 Nicotiana tabacum HOM05D006053 ORTHO05D008381 6.6e-27 125.2 234 46.6
Nn2g10473 Nelumbo nucifera HOM05D006053 ORTHO05D008381 8.6e-27 124.8 247 48.2
Rhsim03G0127000 Rhododendron simsii HOM05D006053 ORTHO05D008381 8.6e-27 124.8 260 55.0
GSVIVG01016604001 Vitis vinifera HOM05D006053 ORTHO05D008381 8.6e-27 124.8 248 56.9
vmacro07150 Vaccinium macrocarpon HOM05D006053 ORTHO05D008381 1.5e-26 124.0 271 44.3
DCAR_015208 Daucus carota HOM05D006053 ORTHO05D008381 2.5e-26 123.2 266 45.5
Duzib114G0287 Durio zibethinus HOM05D006053 ORTHO05D008381 5.6e-26 122.1 229 57.6
Thecc.10G048700 Theobroma cacao HOM05D006053 ORTHO05D008381 5.6e-26 122.1 229 54.1
Cfa001523 Carpinus fangiana HOM05D006053 ORTHO05D008381 1.6e-25 120.6 234 39.3
Phvul.007G011000 Phaseolus vulgaris HOM05D006053 ORTHO05D008381 2.1e-25 120.2 234 50.4
Gohir.A10G214200 Gossypium hirsutum HOM05D006053 ORTHO05D008381 2.8e-25 119.8 229 51.1
Lsat_1_v5_gn_9_66300 Lactuca sativa HOM05D006053 ORTHO05D008381 3.6e-25 119.4 237 49.4
CiPaw.02G181100 Carya illinoinensis HOM05D006053 ORTHO05D008381 1.1e-24 117.9 253 54.9
Gorai.011G253900 Gossypium raimondii HOM05D006053 ORTHO05D008381 1.8e-24 117.1 229 52.4
Gohir.D10G223000 Gossypium hirsutum HOM05D006053 ORTHO05D008381 2.3e-24 116.7 229 52.8
Glyma.10G290400 Glycine max HOM05D006053 ORTHO05D008381 4.0e-24 115.9 237 38.4
PGR142G2322 Punica granatum HOM05D006053 ORTHO05D008381 1.5e-23 114.0 267 46.4
Manes.10G035900 Manihot esculenta HOM05D006053 ORTHO05D008381 3.4e-23 112.8 250 46.8
Hund20006 Selenicereus undatus HOM05D006053 ORTHO05D008381 4.4e-23 112.5 239 48.1
Potri.010G209701 Populus trichocarpa HOM05D006053 ORTHO05D008381 9.9e-23 111.3 257 41.6
TWI63G0066 Tripterygium wilfordii HOM05D006053 ORTHO05D008381 9.9e-23 111.3 256 42.6
arahy.Tifrunner.gnm1.ann1.AZ4556 Arachis hypogaea HOM05D006053 ORTHO05D008381 1.7e-22 110.5 241 45.6
Lj5g0015550 Lotus japonicus HOM05D006053 ORTHO05D008381 3.7e-22 109.4 243 47.7
QL08p058728 Quercus lobata HOM05D006053 ORTHO05D008381 3.7e-22 109.4 256 52.7
Medtr1g115375 Medicago truncatula HOM05D006053 ORTHO05D008381 8.3e-22 108.2 99 56.6
arahy.Tifrunner.gnm1.ann1.JRYV00 Arachis hypogaea HOM05D006053 ORTHO05D008381 1.4e-21 107.5 242 41.3
MSTRG.23542 Avicennia marina HOM05D006053 ORTHO05D008381 3.2e-21 106.3 237 48.9
Aqoxy2G02006 Aquilegia oxysepala HOM05D006053 ORTHO05D008381 4.1e-21 105.9 258 48.1
Sabra10G0162000 Salix brachista HOM05D006053 ORTHO05D008381 4.1e-21 105.9 82 61.0
EL10As19g24197 Beta vulgaris HOM05D006053 ORTHO05D008381 5.4e-21 105.5 258 38.0
Sc20g0002520 Simmondsia chinensis HOM05D006053 ORTHO05D008381 5.4e-21 105.5 272 47.4
SGA_v2.0_scaffold115G32148 Striga asiatica HOM05D006053 ORTHO05D008381 5.4e-21 105.5 231 54.1
CDE09G1153 Ceratophyllum demersum HOM05D006053 ORTHO05D008381 7.1e-21 105.1 77 67.5
RhsimUnG0003300 Rhododendron simsii HOM05D006053 ORTHO05D008381 1.2e-20 104.4 67 71.6
Peaxi162Scf00408g00034 Petunia axillaris HOM05D006053 ORTHO05D008381 1.6e-20 104.0 239 51.5
Glyma.20G098800 Glycine max HOM05D006053 ORTHO05D008381 3.5e-20 102.8 235 49.4
TPR.G14004 Trifolium pratense HOM05D006053 ORTHO05D008381 6.0e-20 102.1 72 63.9
Prupe.2G229700 Prunus persica HOM05D006053 ORTHO05D008381 1.3e-19 100.9 234 55.1
RcHm_v2.0_Chr1g0365851 Rosa chinensis HOM05D006053 ORTHO05D008381 1.3e-19 100.9 72 62.5
Prupe.2G229600 Prunus persica HOM05D006053 ORTHO05D008381 2.3e-19 100.1 237 53.2
MELO3C023836.2 Cucumis melo HOM05D006053 ORTHO05D008381 3.0e-19 99.8 79 60.8
Ah.16g107460 Amaranthus hybridus HOM05D006053 ORTHO05D008381 5.1e-19 99.0 239 40.2
PSO339G3195 Papaver somniferum HOM05D006053 ORTHO05D008381 5.1e-19 99.0 71 63.4
PSO384G4800 Papaver somniferum HOM05D006053 ORTHO05D008381 5.1e-19 99.0 71 63.4
SEGI_38671 Sequoiadendron giganteum HOM05D006053 ORTHO05D008381 5.1e-19 99.0 74 64.9
Lalb_Chr06g0164221 Lupinus albus HOM05D006053 ORTHO05D008381 6.6e-19 98.6 58 77.6
MD07G1191600 Malus domestica HOM05D006053 ORTHO05D008381 6.6e-19 98.6 257 52.5
Ciclev10031409m.g Citrus clementina HOM05D006053 ORTHO05D008381 8.6e-19 98.2 254 49.2
MD01G1122100 Malus domestica HOM05D006053 ORTHO05D008381 8.6e-19 98.2 244 41.4
Psat6g236560 Pisum sativum HOM05D006053 ORTHO05D008381 8.6e-19 98.2 245 47.3
PGSC0003DMG400031213 Solanum tuberosum HOM05D006053 ORTHO05D008381 8.6e-19 98.2 232 39.2
Oeu056126.3 Olea europaea HOM05D006053 ORTHO05D008381 1.1e-18 97.8 226 55.3
Solyc06g018110.3 Solanum lycopersicum HOM05D006053 ORTHO05D008381 1.1e-18 97.8 71 62.0
Cpa.g.sc1.353 Carica papaya HOM05D006053 ORTHO05D008381 3.3e-18 96.3 254 50.4
Sopen06g008460 Solanum pennellii HOM05D006053 ORTHO05D008381 3.3e-18 96.3 59 71.2
ClCG07G003140 Citrullus lanatus HOM05D006053 ORTHO05D008381 4.3e-18 95.9 58 75.9
Haze_17018 Corylus avellana HOM05D006053 ORTHO05D008381 4.3e-18 95.9 65 67.7
Eucgr.G02908 Eucalyptus grandis HOM05D006053 ORTHO05D008381 4.3e-18 95.9 319 43.6
A09p48230 Brassica napus HOM05D006053 ORTHO05D008381 7.3e-18 95.1 219 43.8
BraA09t40276Z Brassica rapa HOM05D006053 ORTHO05D008381 7.3e-18 95.1 219 43.8
CDE02G2651 Ceratophyllum demersum HOM05D006053 ORTHO05D008381 7.3e-18 95.1 229 40.6
Thhalv10010257m.g Eutrema salsugineum HOM05D006053 ORTHO05D008381 7.3e-18 95.1 229 54.1
Carub.0005s2199 Capsella rubella HOM05D006053 ORTHO05D008381 9.6e-18 94.7 230 39.1
FAN06G4406 Fragaria x ananassa HOM05D006053 ORTHO05D008381 1.2e-17 94.4 82 53.7
FAN10G2741 Fragaria x ananassa HOM05D006053 ORTHO05D008381 1.2e-17 94.4 82 53.7
FAN01G1874 Fragaria x ananassa HOM05D006053 ORTHO05D008381 2.1e-17 93.6 82 53.7
BcaB01g00113 Brassica carinata HOM05D006053 ORTHO05D008381 2.8e-17 93.2 223 38.1
Migut.L00294 Erythranthe guttata HOM05D006053 ORTHO05D008381 2.8e-17 93.2 235 48.5
arahy.Tifrunner.gnm1.ann1.QP8TMD Arachis hypogaea HOM05D012495 ORTHO05D013764 4.7e-17 92.4 64 71.9
C08p30500 Brassica napus HOM05D006053 ORTHO05D008381 4.7e-17 92.4 225 47.1
BolC8t50669H Brassica oleracea HOM05D006053 ORTHO05D008381 4.7e-17 92.4 225 47.1
CsaV3_5G006870 Cucumis sativus L. HOM05D006053 ORTHO05D008381 4.7e-17 92.4 239 44.8
SHI22531 Sapria himalayana HOM05D006053 ORTHO05D008381 4.7e-17 92.4 70 58.6
AT3G55340 Arabidopsis thaliana HOM05D006053 ORTHO05D008381 6.2e-17 92.0 217 43.3
COL.COLO4_14945 Corchorus olitorius HOM05D006053 ORTHO05D008381 1.1e-16 91.3 97 48.5
Os05g0114500 Oryza sativa ssp. japonica HOM05D006053 ORTHO05D008381 1.1e-16 91.3 70 61.4
unitig_699.g19587 Utricularia gibba HOM05D006053 ORTHO05D008381 1.1e-16 91.3 59 66.1
FAN06G2982 Fragaria x ananassa HOM05D006053 ORTHO05D008381 1.4e-16 90.9 295 41.4
HPP92_006599 Vanilla planifolia HOM05D006053 ORTHO05D008381 1.4e-16 90.9 250 38.4
AUR62038388 Chenopodium quinoa HOM05D006053 ORTHO05D008381 2.4e-16 90.1 71 60.6
ATR0113G011 Amborella trichopoda HOM05D006053 ORTHO05D008381 3.1e-16 89.7 255 43.9
THA.LOC104824082 Tarenaya hassleriana HOM05D006053 ORTHO05D008381 1.2e-15 87.8 252 38.5
AUR62038385 Chenopodium quinoa HOM05D006053 ORTHO05D008381 3.4e-15 86.3 99 49.5
Zm00001eb266400 Zea mays HOM05D006053 ORTHO05D008381 3.4e-15 86.3 61 60.7
Sp5g07130 Schrenkiella parvula HOM05D006053 ORTHO05D008381 4.4e-15 85.9 229 54.6
FvH4_7g21531 Fragaria vesca HOM05D006053 ORTHO05D008381 5.8e-15 85.5 298 37.6
ECA232G2518 Erigeron canadensis HOM05D006053 ORTHO05D008381 1.7e-14 84.0 261 42.5
Atru.chr12.522 Acer truncatum HOM05D006053 ORTHO05D008381 2.2e-14 83.6 269 36.4
Aa31LG10G10350 Aethionema arabicum HOM05D006053 ORTHO05D008381 1.9e-13 80.5 234 49.6
Sed0000212 Sechium edule HOM05D006053 ORTHO05D008381 4.2e-13 79.3 238 39.5
FAN03G0613 Fragaria x ananassa HOM05D006053 ORTHO05D008381 9.3e-13 78.2 285 41.1
AUR62022513 Chenopodium quinoa HOM05D006053 ORTHO05D008381 1.7e-11 73.9 328 31.7
Mapoly0121s0015 Marchantia polymorpha HOM05D006053 ORTHO05D008381 7.3e-10 68.6 77 42.9
Pp3c14_1940 Physcomitrium patens HOM05D006053 ORTHO05D008381 7.3e-10 68.6 86 40.7
SMO118G0265 Selaginella moellendorffii HOM05D006053 ORTHO05D008381 9.6e-10 68.2 51 52.9
AagrBONN_evm.TU.Sc2ySwM_368.1156 Anthoceros agrestis HOM05D006053 ORTHO05D008381 2.1e-09 67.0 68 45.6
CARHR165350 Cardamine hirsuta HOM05D006053 ORTHO05D008381 4.8e-09 65.9 219 47.0
MCO04G213 Micromonas commoda HOM05D006053 ORTHO05D008381 8.1e-09 65.1 69 42.0
AL5G36480 Arabidopsis lyrata HOM05D006053 ORTHO05D008381 2.0e-07 60.5 224 33.9
BcaB02g08428 Brassica carinata HOM05D006053 ORTHO05D008381 1.7e-06 57.4 79 41.8


User provided reference genes

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