Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_26481 Corylus avellana HOM05D006124 ORTHO05D007854 3.4e-236 821.2 403 100.0
Hma1.2p1_0002F.1_g001970 Hydrangea macrophylla HOM05D006124 ORTHO05D007854 8.7e-83 311.6 394 43.4
HanXRQChr02g0055911 Helianthus annuus HOM05D006124 ORTHO05D007854 1.1e-82 311.2 391 42.7
Lalb_Chr14g0365721 Lupinus albus HOM05D006124 ORTHO05D007854 1.1e-82 311.2 391 40.9
GSVIVG01025154001 Vitis vinifera HOM05D006124 ORTHO05D007854 2.5e-82 310.1 391 41.9
VMungo1383G3228 Vigna mungo HOM05D006124 ORTHO05D007854 9.7e-82 308.1 391 40.7
Aa31LG1G19730 Aethionema arabicum HOM05D006124 ORTHO05D007854 1.3e-81 307.8 409 42.3
COL.COLO4_05187 Corchorus olitorius HOM05D006124 ORTHO05D007854 2.8e-81 306.6 397 41.3
SEGI_32950 Sequoiadendron giganteum HOM05D006124 ORTHO05D007854 3.7e-81 306.2 387 40.8
Lsat_1_v5_gn_6_46340 Lactuca sativa HOM05D006124 ORTHO05D007854 1.1e-80 304.7 388 42.0
MD03G1112800 Malus domestica HOM05D006124 ORTHO05D007854 1.1e-80 304.7 389 42.9
Rhsim08G0043400 Rhododendron simsii HOM05D006124 ORTHO05D007854 1.1e-80 304.7 406 40.9
Ciclev10005033m.g Citrus clementina HOM05D006124 ORTHO05D007854 1.4e-80 304.3 402 41.0
Thecc.09G259100 Theobroma cacao HOM05D006124 ORTHO05D007854 1.4e-80 304.3 393 41.0
Glyma.11G073900 Glycine max HOM05D006124 ORTHO05D007854 1.8e-80 303.9 391 40.2
Gohir.A09G106200 Gossypium hirsutum HOM05D006124 ORTHO05D007854 2.4e-80 303.5 391 41.4
Gorai.006G120700 Gossypium raimondii HOM05D006124 ORTHO05D007854 2.4e-80 303.5 391 41.4
CSS0017090 Camellia sinensis var. sinensis HOM05D006124 ORTHO05D007854 3.1e-80 303.1 392 42.1
Cc01_g01430 Coffea canephora HOM05D006124 ORTHO05D007854 3.1e-80 303.1 389 42.7
PSO339G3674 Papaver somniferum HOM05D006124 ORTHO05D007854 3.1e-80 303.1 391 41.4
Actinidia07118 Actinidia chinensis HOM05D006124 ORTHO05D007854 4.1e-80 302.8 394 41.9
PSO384G4530 Papaver somniferum HOM05D006124 ORTHO05D007854 4.1e-80 302.8 391 41.7
PSO541G0641 Papaver somniferum HOM05D006124 ORTHO05D007854 4.1e-80 302.8 391 41.7
CANSAT54G1697 Cannabis sativa HOM05D006124 ORTHO05D007854 5.3e-80 302.4 387 40.6
Gohir.D09G102900 Gossypium hirsutum HOM05D006124 ORTHO05D007854 5.3e-80 302.4 402 41.0
Glyma.19G129000 Glycine max HOM05D006124 ORTHO05D007854 6.9e-80 302.0 392 40.1
vmacro03179 Vaccinium macrocarpon HOM05D006124 ORTHO05D007854 6.9e-80 302.0 406 40.6
ECA233G1948 Erigeron canadensis HOM05D006124 ORTHO05D007854 9.1e-80 301.6 391 41.9
Migut.D02195 Erythranthe guttata HOM05D006124 ORTHO05D007854 1.2e-79 301.2 404 41.3
MSTRG.21138 Avicennia marina HOM05D006124 ORTHO05D007854 1.5e-79 300.8 389 41.9
CAN.G219.5 Capsicum annuum HOM05D006124 ORTHO05D007854 1.5e-79 300.8 389 42.4
FvH4_3g32970 Fragaria vesca HOM05D006124 ORTHO05D007854 1.5e-79 300.8 389 41.4
Nn7g36111 Nelumbo nucifera HOM05D006124 ORTHO05D007854 1.5e-79 300.8 392 41.1
Peaxi162Scf00876g00022 Petunia axillaris HOM05D006124 ORTHO05D007854 1.5e-79 300.8 389 42.2
Carub.0001s0430 Capsella rubella HOM05D006124 ORTHO05D007854 2.0e-79 300.4 412 40.3
CARHR004500 Cardamine hirsuta HOM05D006124 ORTHO05D007854 2.0e-79 300.4 396 41.7
Nitab4.5_0000214g0090 Nicotiana tabacum HOM05D006124 ORTHO05D007854 2.0e-79 300.4 389 42.4
RcHm_v2.0_Chr5g0060301 Rosa chinensis HOM05D006124 ORTHO05D007854 2.0e-79 300.4 389 41.4
Thhalv10007730m.g Eutrema salsugineum HOM05D006124 ORTHO05D007854 2.6e-79 300.1 412 40.8
TPR.G16093 Trifolium pratense HOM05D006124 ORTHO05D007854 2.6e-79 300.1 391 40.2
EL10Ac5g12347 Beta vulgaris HOM05D006124 ORTHO05D007854 3.4e-79 299.7 391 40.9
Cpa.g.sc139.77 Carica papaya HOM05D006124 ORTHO05D007854 3.4e-79 299.7 393 41.5
FAN11G0357 Fragaria x ananassa HOM05D006124 ORTHO05D007854 3.4e-79 299.7 389 41.1
Atru.chr3.3681 Acer truncatum HOM05D006124 ORTHO05D007854 4.5e-79 299.3 409 40.3
C08p01730 Brassica napus HOM05D006124 ORTHO05D007854 4.5e-79 299.3 406 41.1
BolC8t46973H Brassica oleracea HOM05D006124 ORTHO05D007854 4.5e-79 299.3 406 41.1
Duzib150G0641 Durio zibethinus HOM05D006124 ORTHO05D007854 4.5e-79 299.3 393 40.7
SMO141G0040 Selaginella moellendorffii HOM05D006124 ORTHO05D007854 4.5e-79 299.3 383 40.5
Lj1g0025688 Lotus japonicus HOM05D006124 ORTHO05D007854 5.9e-79 298.9 392 40.6
MBI18_g17017_MAGBIO Magnolia biondii HOM05D006124 ORTHO05D007854 5.9e-79 298.9 393 40.2
Prupe.6G097100 Prunus persica HOM05D006124 ORTHO05D007854 5.9e-79 298.9 388 42.0
THA.LOC104801004 Tarenaya hassleriana HOM05D006124 ORTHO05D007854 5.9e-79 298.9 397 41.6
FAN21G3497 Fragaria x ananassa HOM05D006124 ORTHO05D007854 7.7e-79 298.5 389 41.1
FAN25G1144 Fragaria x ananassa HOM05D006124 ORTHO05D007854 7.7e-79 298.5 399 40.9
TWI39G0794 Tripterygium wilfordii HOM05D006124 ORTHO05D007854 7.7e-79 298.5 391 41.2
AL1G14800 Arabidopsis lyrata HOM05D006124 ORTHO05D007854 1.0e-78 298.1 396 41.2
AT1G05055 Arabidopsis thaliana HOM05D006124 ORTHO05D007854 1.0e-78 298.1 396 41.2
Aqoxy5G00340 Aquilegia oxysepala HOM05D006124 ORTHO05D007854 1.3e-78 297.7 394 42.1
Sp1g03920 Schrenkiella parvula HOM05D006124 ORTHO05D007854 1.7e-78 297.4 414 40.3
BcaB03g13459 Brassica carinata HOM05D006124 ORTHO05D007854 2.2e-78 297.0 406 40.9
A08p36590 Brassica napus HOM05D006124 ORTHO05D007854 2.2e-78 297.0 406 40.9
BraA08t35561Z Brassica rapa HOM05D006124 ORTHO05D007854 2.2e-78 297.0 406 40.9
Eucgr.J00945 Eucalyptus grandis HOM05D006124 ORTHO05D007854 2.2e-78 297.0 392 41.1
Mapoly0005s0033 Marchantia polymorpha HOM05D006124 ORTHO05D007854 2.2e-78 297.0 390 40.8
Peaxi162Scf00272g00827 Petunia axillaris HOM05D006124 ORTHO05D007854 2.2e-78 297.0 389 41.4
Solyc04g054700.3 Solanum lycopersicum HOM05D006124 ORTHO05D007854 2.2e-78 297.0 399 41.9
Dinv30520 Davidia involucrata HOM05D006124 ORTHO05D007854 2.9e-78 296.6 393 41.0
Manes.04G024500 Manihot esculenta HOM05D006124 ORTHO05D007854 3.8e-78 296.2 388 40.5
Medtr7g089440 Medicago truncatula HOM05D006124 ORTHO05D007854 3.8e-78 296.2 395 39.7
Os04g0508900 Oryza sativa ssp. japonica HOM05D006124 ORTHO05D007854 3.8e-78 296.2 391 39.1
Ca_08379_v3 Cicer arietinum L. HOM05D006124 ORTHO05D007854 5.0e-78 295.8 391 39.6
Sabra04G0071700 Salix brachista HOM05D006124 ORTHO05D007854 5.0e-78 295.8 384 41.1
arahy.Tifrunner.gnm1.ann1.63AZS3 Arachis hypogaea HOM05D006124 ORTHO05D007854 6.5e-78 295.4 391 39.9
Lalb_Chr22g0357551 Lupinus albus HOM05D006124 ORTHO05D007854 6.5e-78 295.4 391 39.1
Potri.004G113700 Populus trichocarpa HOM05D006124 ORTHO05D007854 6.5e-78 295.4 384 40.6
arahy.Tifrunner.gnm1.ann1.M1WJK6 Arachis hypogaea HOM05D006124 ORTHO05D007854 1.1e-77 294.7 391 39.9
Sed0018571 Sechium edule HOM05D006124 ORTHO05D007854 1.1e-77 294.7 393 39.7
Ciclev10011800m.g Citrus clementina HOM05D006124 ORTHO05D007854 1.4e-77 294.3 391 39.6
Cfa012640 Carpinus fangiana HOM05D006124 ORTHO05D007854 4.2e-77 292.7 391 39.6
QL01p023235 Quercus lobata HOM05D006124 ORTHO05D007854 4.2e-77 292.7 393 39.4
Zm00001eb077790 Zea mays HOM05D006124 ORTHO05D007854 4.2e-77 292.7 389 40.1
ClCG01G004970 Citrullus lanatus HOM05D006124 ORTHO05D007854 1.2e-76 291.2 393 39.2
CsaV3_5G005370 Cucumis sativus L. HOM05D006124 ORTHO05D007854 1.2e-76 291.2 393 38.9
MELO3C005421.2 Cucumis melo HOM05D006124 ORTHO05D007854 2.1e-76 290.4 393 39.4
Nitab4.5_0004386g0010 Nicotiana tabacum HOM05D006124 ORTHO05D007854 2.7e-76 290.0 389 42.2
unitig_21.g20322 Utricularia gibba HOM05D006124 ORTHO05D007854 3.6e-76 289.7 402 39.3
CBR_g21234 Chara braunii HOM05D006124 ORTHO05D007854 7.9e-76 288.5 403 38.2
Haze_08019 Corylus avellana HOM05D006124 ORTHO05D007854 1.8e-75 287.3 414 38.6
SGA_v2.0_scaffold61G21160 Striga asiatica HOM05D006124 ORTHO05D007854 3.9e-75 286.2 408 39.7
Pp3c24_6530 Physcomitrium patens HOM05D006124 ORTHO05D007854 2.4e-72 276.9 396 36.9
Ah.13g077240 Amaranthus hybridus HOM05D006124 ORTHO05D007854 2.0e-71 273.9 335 44.8
CiPaw.05G171100 Carya illinoinensis HOM05D006124 ORTHO05D007854 1.0e-70 271.6 392 38.3
Cfa026643 Carpinus fangiana HOM05D006124 ORTHO05D007854 6.5e-70 268.9 450 34.2
TAR369G0666 Trochodendron aralioides HOM05D006124 ORTHO05D007854 1.1e-69 268.1 330 42.4
AUR62018404 Chenopodium quinoa HOM05D006124 ORTHO05D007854 1.4e-69 267.7 374 39.6
Sc06g0010480 Simmondsia chinensis HOM05D006124 ORTHO05D007854 1.4e-69 267.7 319 42.9
Oeu035057.1 Olea europaea HOM05D006124 ORTHO05D007854 4.2e-69 266.2 345 40.9
Phvul.001G121400 Phaseolus vulgaris HOM05D006124 ORTHO05D007854 7.2e-69 265.4 309 42.7
Sopen04g024450 Solanum pennellii HOM05D006124 ORTHO05D007854 1.2e-68 264.6 320 44.4
AUR62021039 Chenopodium quinoa HOM05D006124 ORTHO05D007854 2.1e-68 263.8 351 40.7
DCAR_015555 Daucus carota HOM05D006124 ORTHO05D007854 2.1e-68 263.8 347 42.1
CDE04G2680 Ceratophyllum demersum HOM05D006124 ORTHO05D007854 1.0e-67 261.5 326 42.3
SalBow3G1513 Salvia bowleyana HOM05D006124 ORTHO05D007854 1.0e-67 261.5 345 41.2
PGR119G0371 Punica granatum HOM05D006124 ORTHO05D007854 3.0e-67 260.0 349 41.8
CiPaw.13G108300 Carya illinoinensis HOM05D006124 ORTHO05D007854 8.8e-67 258.5 351 39.6
Cre03.g179550 Chlamydomonas reinhardtii HOM05D006124 ORTHO05D007854 8.8e-67 258.5 402 33.8
ATR0580G285 Amborella trichopoda HOM05D006124 ORTHO05D007854 5.3e-64 249.2 319 41.4
MD11G1132000 Malus domestica HOM05D006124 ORTHO05D007854 1.1e-61 241.5 314 41.7
MCO11G183 Micromonas commoda HOM05D006124 ORTHO05D007854 7.2e-61 238.8 407 34.2
Lj1C682G4 Lonicera japonica HOM05D006124 ORTHO05D007854 1.1e-56 224.9 281 42.3
Peaxi162Scf00106g02220 Petunia axillaris HOM05D006124 ORTHO05D007854 1.4e-56 224.6 386 36.0
Peaxi162Scf00876g00023 Petunia axillaris HOM05D006124 ORTHO05D007854 1.0e-54 218.4 296 41.2
AagrBONN_evm.TU.Sc2ySwM_344.4431 Anthoceros agrestis HOM05D006124 ORTHO05D007854 2.2e-54 217.2 245 44.9
Psat3g079640 Pisum sativum HOM05D006124 ORTHO05D007854 5.0e-54 216.1 272 40.8
PRCOL_00001395 Prasinoderma coloniale HOM05D006124 ORTHO05D007854 5.4e-48 196.1 351 32.8
BolC5t29103H Brassica oleracea HOM05D006124 ORTHO05D007854 5.7e-42 176.0 286 38.5
CAN.G1136.1 Capsicum annuum HOM05D006124 ORTHO05D007854 9.8e-42 175.3 248 39.1
PGSC0003DMG401027913 Solanum tuberosum HOM05D006124 ORTHO05D007854 2.2e-33 147.5 230 37.0
Solyc08g028693.1 Solanum lycopersicum HOM05D006124 ORTHO05D007854 9.2e-32 142.1 183 39.9
Lj1A187G25 Lonicera japonica HOM05D006124 ORTHO05D007854 1.5e-13 81.6 124 34.7
HPP92_015146 Vanilla planifolia HOM05D006124 ORTHO05D007854 8.1e-12 75.9 70 48.6
Psat6g235520 Pisum sativum HOM05D006124 ORTHO05D001516 3.4e-10 70.5 72 44.4


User provided reference genes

Program Settings