Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_20113 Corylus avellana HOM05D005824 ORTHO05D007029 0.0e+00 1292.3 727 100.0
Cfa020078 Carpinus fangiana HOM05D005824 ORTHO05D007029 9.9e-312 1072.8 727 84.5
CiPaw.10G020000 Carya illinoinensis HOM05D005824 ORTHO05D007029 9.4e-245 850.5 728 67.9
QL07p026733 Quercus lobata HOM05D005824 ORTHO05D007029 2.2e-241 839.3 726 63.5
GSVIVG01031305001 Vitis vinifera HOM05D005824 ORTHO05D007029 6.6e-214 748.0 728 56.9
CSS0029355 Camellia sinensis var. sinensis HOM05D005824 ORTHO05D007029 2.6e-202 709.5 728 55.9
Dinv24497 Davidia involucrata HOM05D005824 ORTHO05D007029 2.6e-202 709.5 724 55.5
Oeu061927.1 Olea europaea HOM05D005824 ORTHO05D007029 9.0e-195 684.5 730 54.4
TAR362G0448 Trochodendron aralioides HOM05D005824 ORTHO05D007029 8.4e-193 677.9 728 60.0
Lalb_Chr02g0154321 Lupinus albus HOM05D005824 ORTHO05D007029 1.4e-192 677.2 775 51.5
Rhsim11G0099700 Rhododendron simsii HOM05D005824 ORTHO05D007029 1.4e-192 677.2 728 56.5
Thecc.09G352900 Theobroma cacao HOM05D005824 ORTHO05D007029 3.5e-191 672.5 774 51.4
Manes.06G027100 Manihot esculenta HOM05D005824 ORTHO05D007029 2.3e-190 669.8 733 54.3
Potri.015G010900 Populus trichocarpa HOM05D005824 ORTHO05D007029 1.9e-189 666.8 783 51.6
Lj3g0001001 Lotus japonicus HOM05D005824 ORTHO05D007029 1.3e-188 664.1 769 51.2
Sabra15G0009000 Salix brachista HOM05D005824 ORTHO05D007029 3.1e-187 659.4 799 48.9
VMungo0720G2244 Vigna mungo HOM05D005824 ORTHO05D007029 5.3e-187 658.7 761 50.6
Ca_11665_v3 Cicer arietinum L. HOM05D005824 ORTHO05D007029 5.8e-186 655.2 738 52.2
Lj5g0026124 Lotus japonicus HOM05D005824 ORTHO05D007029 1.7e-185 653.7 770 50.4
Glyma.02G192500 Glycine max HOM05D005824 ORTHO05D007029 2.4e-184 649.8 771 50.1
arahy.Tifrunner.gnm1.ann1.E5V6X9 Arachis hypogaea HOM05D005824 ORTHO05D007029 3.5e-183 646.0 774 49.1
Cpa.g.sc48.209 Carica papaya HOM05D005824 ORTHO05D007029 6.0e-183 645.2 733 51.4
Gohir.A03G155800 Gossypium hirsutum HOM05D005824 ORTHO05D007029 7.9e-183 644.8 757 50.7
Glyma.10G084300 Glycine max HOM05D005824 ORTHO05D007029 1.3e-182 644.0 771 49.2
Sopen01g044470 Solanum pennellii HOM05D005824 ORTHO05D007029 1.3e-182 644.0 736 51.9
arahy.Tifrunner.gnm1.ann1.S86EGP Arachis hypogaea HOM05D005824 ORTHO05D007029 2.3e-182 643.3 774 49.0
Medtr1g055080 Medicago truncatula HOM05D005824 ORTHO05D007029 2.5e-181 639.8 769 49.4
Gorai.005G200700 Gossypium raimondii HOM05D005824 ORTHO05D007029 4.3e-181 639.0 769 49.9
vmacro01596 Vaccinium macrocarpon HOM05D005824 ORTHO05D007029 2.8e-180 636.3 694 53.3
PGSC0003DMG400018251 Solanum tuberosum HOM05D005824 ORTHO05D007029 4.8e-180 635.6 738 51.6
TPR.G21237 Trifolium pratense HOM05D005824 ORTHO05D007029 8.1e-180 634.8 783 49.0
TPR.G12910 Trifolium pratense HOM05D005824 ORTHO05D007029 1.1e-179 634.4 769 49.5
Prupe.6G306900 Prunus persica HOM05D005824 ORTHO05D007029 1.4e-179 634.0 789 49.2
Nitab4.5_0009690g0020 Nicotiana tabacum HOM05D005824 ORTHO05D007029 2.6e-178 629.8 734 51.1
Atru.chr12.1601 Acer truncatum HOM05D005824 ORTHO05D007029 1.9e-176 623.6 759 50.5
Psat6g118640 Pisum sativum HOM05D005824 ORTHO05D007029 1.9e-176 623.6 784 48.5
Phvul.007G265900 Phaseolus vulgaris HOM05D005824 ORTHO05D007029 1.3e-174 617.5 771 49.7
Lj5A322T66 Lonicera japonica HOM05D005824 ORTHO05D007029 6.7e-174 615.1 702 51.0
TWI38G0226 Tripterygium wilfordii HOM05D005824 ORTHO05D007029 6.7e-174 615.1 731 50.5
CAN.G1374.10 Capsicum annuum HOM05D005824 ORTHO05D007029 2.8e-172 609.8 736 51.2
Eucgr.B01798 Eucalyptus grandis HOM05D005824 ORTHO05D007029 1.1e-171 607.8 739 49.8
CANSAT54G1845 Cannabis sativa HOM05D005824 ORTHO05D007029 1.8e-171 607.1 770 47.3
SalBow7G3942 Salvia bowleyana HOM05D005824 ORTHO05D007029 1.2e-170 604.4 735 48.6
MSTRG.15631 Avicennia marina HOM05D005824 ORTHO05D007029 2.6e-170 603.2 737 49.3
ClCG07G011770 Citrullus lanatus HOM05D005824 ORTHO05D007029 3.8e-169 599.4 736 49.3
Cc02_g35570 Coffea canephora HOM05D005824 ORTHO05D007029 1.2e-167 594.3 827 44.1
RcHm_v2.0_Chr3g0458051 Rosa chinensis HOM05D005824 ORTHO05D007029 1.6e-167 594.0 792 49.4
Gohir.D02G178900 Gossypium hirsutum HOM05D005824 ORTHO05D007029 6.1e-167 592.0 791 46.6
Duzib150G0567 Durio zibethinus HOM05D005824 ORTHO05D007029 5.7e-165 585.5 738 49.2
Migut.B00860 Erythranthe guttata HOM05D005824 ORTHO05D007029 1.3e-164 584.3 730 47.5
Sc09g0002470 Simmondsia chinensis HOM05D005824 ORTHO05D007029 1.3e-164 584.3 777 45.8
MBI19_g32704_MAGBIO Magnolia biondii HOM05D005824 ORTHO05D007029 4.8e-164 582.4 790 46.2
Nn2g14227 Nelumbo nucifera HOM05D005824 ORTHO05D007029 2.0e-162 577.0 732 48.1
PSO339G3868 Papaver somniferum HOM05D005824 ORTHO05D007029 8.5e-161 571.6 728 49.6
Hund21844 Selenicereus undatus HOM05D005824 ORTHO05D007029 8.5e-161 571.6 856 42.5
CsaV3_4G002430 Cucumis sativus L. HOM05D005824 ORTHO05D007029 2.5e-160 570.1 733 47.6
MD04G1189300 Malus domestica HOM05D005824 ORTHO05D007029 3.2e-160 569.7 782 46.0
PSO384G0570 Papaver somniferum HOM05D005824 ORTHO05D007029 9.4e-160 568.2 733 49.2
Aqoxy2G02580 Aquilegia oxysepala HOM05D005824 ORTHO05D007029 1.4e-158 564.3 733 47.1
MELO3C017799.2 Cucumis melo HOM05D005824 ORTHO05D007029 2.3e-158 563.5 738 46.9
FvH4_6g08180 Fragaria vesca HOM05D005824 ORTHO05D007029 3.0e-158 563.1 791 47.2
FAN14G3202 Fragaria x ananassa HOM05D005824 ORTHO05D007029 6.7e-158 562.0 791 47.0
MD12G1202100 Malus domestica HOM05D005824 ORTHO05D007029 4.3e-157 559.3 783 46.0
Sed0007659 Sechium edule HOM05D005824 ORTHO05D007029 4.3e-157 559.3 739 46.1
Nitab4.5_0000185g0360 Nicotiana tabacum HOM05D005824 ORTHO05D007029 5.7e-157 558.9 732 47.1
Hma1.2p1_1243F.1_g269980 Hydrangea macrophylla HOM05D005824 ORTHO05D007029 1.7e-156 557.4 576 54.7
PSO017G5895 Papaver somniferum HOM05D005824 ORTHO05D007029 6.9e-155 552.0 723 47.2
AUR62006798 Chenopodium quinoa HOM05D005824 ORTHO05D007029 1.2e-154 551.2 822 42.2
ECA247G2466 Erigeron canadensis HOM05D005824 ORTHO05D007029 2.6e-154 550.1 731 46.5
SGA_v2.0_scaffold33G13450 Striga asiatica HOM05D005824 ORTHO05D007029 1.3e-153 547.7 763 44.4
Duzib168G0004 Durio zibethinus HOM05D005824 ORTHO05D007029 1.7e-153 547.4 731 46.4
AUR62000450 Chenopodium quinoa HOM05D005824 ORTHO05D007029 6.5e-153 545.4 830 41.6
COL.COLO4_11087 Corchorus olitorius HOM05D005824 ORTHO05D007029 1.9e-152 543.9 733 46.0
EL10Ac4g09532 Beta vulgaris HOM05D005824 ORTHO05D007029 4.7e-151 539.3 793 42.7
THA.LOC104821746 Tarenaya hassleriana HOM05D005824 ORTHO05D007029 3.3e-149 533.1 792 42.3
FAN09G3961 Fragaria x ananassa HOM05D005824 ORTHO05D007029 1.7e-148 530.8 791 45.3
PSO063G2449 Papaver somniferum HOM05D005824 ORTHO05D007029 4.5e-146 522.7 726 46.1
DCAR_005271 Daucus carota HOM05D005824 ORTHO05D007029 1.6e-138 497.7 724 46.5
Sp2g21220 Schrenkiella parvula HOM05D005824 ORTHO05D007029 4.5e-138 496.1 798 40.7
FAN05G5613 Fragaria x ananassa HOM05D005824 ORTHO05D007029 1.5e-136 491.1 766 43.6
Ah.10g027060 Amaranthus hybridus HOM05D005824 ORTHO05D007029 1.9e-136 490.7 780 41.5
Thhalv10003721m.g Eutrema salsugineum HOM05D005824 ORTHO05D007029 8.0e-135 485.3 794 39.9
CARHR186810 Cardamine hirsuta HOM05D005824 ORTHO05D007029 3.0e-134 483.4 796 40.5
Carub.0006s2449 Capsella rubella HOM05D005824 ORTHO05D007029 8.3e-132 475.3 793 39.2
Aa31LG11G9880 Aethionema arabicum HOM05D005824 ORTHO05D007029 1.8e-131 474.2 776 39.7
AT5G26760 Arabidopsis thaliana HOM05D005824 ORTHO05D007029 1.2e-127 461.5 817 37.9
Peaxi162Scf00357g00429 Petunia axillaris HOM05D005824 ORTHO05D007029 1.0e-126 458.4 679 43.7
Nitab4.5_0002783g0020 Nicotiana tabacum HOM05D005824 ORTHO05D007029 2.6e-125 453.8 730 42.1
FAN02G4519 Fragaria x ananassa HOM05D005824 ORTHO05D007029 6.3e-124 449.1 770 41.0
CDE01G0540 Ceratophyllum demersum HOM05D005824 ORTHO05D007029 2.4e-123 447.2 757 39.2
Lsat_1_v5_gn_9_78801 Lactuca sativa HOM05D005824 ORTHO05D007029 5.9e-122 442.6 697 47.8
unitig_748.g6998 Utricularia gibba HOM05D005824 ORTHO05D000260 2.3e-121 440.7 724 39.8
ATR0693G066 Amborella trichopoda HOM05D005824 ORTHO05D007029 8.6e-121 438.7 715 40.4
Ciclev10011677m.g Citrus clementina HOM05D005824 ORTHO05D007029 4.2e-120 436.4 533 49.7
AL6G38630 Arabidopsis lyrata HOM05D005824 ORTHO05D007029 5.2e-118 429.5 925 35.0
HanXRQChr12g0362901 Helianthus annuus HOM05D005824 ORTHO05D007029 5.4e-115 419.5 726 39.8
PGR083G1123 Punica granatum HOM05D005824 ORTHO05D007029 1.6e-111 407.9 500 49.6
C02p58640 Brassica napus HOM05D005824 ORTHO05D007029 2.2e-108 397.5 887 33.7
BolC2t11924H Brassica oleracea HOM05D005824 ORTHO05D007029 7.0e-107 392.5 890 34.2
BraA02t08872Z Brassica rapa HOM05D005824 ORTHO05D007029 1.4e-102 378.3 915 33.0
A02p39030 Brassica napus HOM05D005824 ORTHO05D007029 4.0e-102 376.7 920 33.0
BcaNung06222 Brassica carinata HOM05D005824 ORTHO05D007029 2.6e-93 347.4 885 32.9
Actinidia35501 Actinidia chinensis HOM05D005824 ORTHO05D007029 1.4e-86 325.1 506 42.7
Os05g0134300 Oryza sativa ssp. japonica HOM05D005824 ORTHO05D007029 2.4e-86 324.3 783 32.8
Solyc01g101010.4 Solanum lycopersicum HOM05D005824 ORTHO05D007029 6.0e-82 309.7 260 63.1
C07p41490 Brassica napus HOM05D005824 ORTHO05D007029 6.6e-81 306.2 743 32.4
BolC7t44682H Brassica oleracea HOM05D005824 ORTHO05D007029 3.3e-80 303.9 748 33.6
BcaNung03676 Brassica carinata HOM05D005824 ORTHO05D007029 4.3e-80 303.5 742 33.2
Gohir.A08G201701 Gossypium hirsutum HOM05D005824 ORTHO05D007029 1.4e-70 271.9 740 34.3
Hma1.2p1_1553F.1_g290340 Hydrangea macrophylla HOM05D005824 ORTHO05D007029 4.6e-66 256.9 709 32.6
Zm00001eb354720 Zea mays HOM05D005824 ORTHO05D007029 4.6e-66 256.9 623 32.7
HPP92_021934 Vanilla planifolia HOM05D005824 ORTHO05D007029 1.5e-64 251.9 407 39.6
SMO203G0090 Selaginella moellendorffii HOM05D005824 ORTHO05D007029 2.4e-54 218.0 732 27.2
SGA_v2.0_scaffold438G51629 Striga asiatica HOM05D005824 ORTHO05D007029 1.5e-53 215.3 196 55.6
Mapoly0075s0015 Marchantia polymorpha HOM05D005824 ORTHO05D007029 2.0e-53 214.9 791 29.1
Nitab4.5_0000185g0370 Nicotiana tabacum HOM05D005824 ORTHO05D007029 2.0e-53 214.9 338 41.1
SEGI_20129 Sequoiadendron giganteum HOM05D005824 ORTHO05D007029 2.4e-46 191.4 382 35.1
Pp3c6_10400 Physcomitrium patens HOM05D005824 ORTHO05D007029 1.3e-44 185.7 975 23.6
AagrBONN_evm.TU.Sc2ySwM_117.2728 Anthoceros agrestis HOM05D005824 ORTHO05D007029 1.8e-41 175.3 733 24.7
Cfa020079 Carpinus fangiana HOM05D005824 ORTHO05D007029 2.6e-37 161.4 82 98.8
A06p36990 Brassica napus HOM05D005824 ORTHO05D007029 5.0e-36 157.1 239 38.5
BraA06t26625Z Brassica rapa HOM05D005824 ORTHO05D007029 5.0e-36 157.1 239 38.5
Oeu060660.1 Olea europaea HOM05D005824 ORTHO05D007029 8.5e-36 156.4 126 63.5
HPP92_021933 Vanilla planifolia HOM05D005824 ORTHO05D007029 3.9e-33 147.5 188 44.7
Dinv30929 Davidia involucrata HOM05D005824 ORTHO05D007029 5.1e-33 147.1 135 62.2
CBR_g20185 Chara braunii HOM05D005824 ORTHO05D007029 1.4e-25 122.5 349 25.8
CANSAT54G0922 Cannabis sativa HOM05D005824 ORTHO05D007029 1.7e-23 115.5 186 37.1
Nitab4.5_0000185g0350 Nicotiana tabacum HOM05D005824 ORTHO05D007029 1.4e-22 112.5 101 57.4
CDE12G0845 Ceratophyllum demersum HOM05D005824 ORTHO05D007029 1.1e-19 102.8 96 54.2
Zm00001eb056090 Zea mays HOM05D000739 ORTHO05D007029 1.3e-15 89.4 112 42.0
Zm00001eb289330 Zea mays HOM05D005824 ORTHO05D007029 1.4e-14 85.9 100 45.0
QL03p009284 Quercus lobata HOM05D005824 ORTHO05D007029 3.0e-09 68.2 54 66.7
AUR62009842 Chenopodium quinoa HOM05D003327 ORTHO05D004535 2.2e-07 62.0 174 32.2
VMungo0251G1262 Vigna mungo HOM05D005824 ORTHO05D007029 1.4e-06 59.3 79 50.6


User provided reference genes

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