Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_16513 Corylus avellana HOM05D005526 ORTHO05D006802 7.7e-155 550.4 278 100.0
Cfa002011 Carpinus fangiana HOM05D005526 ORTHO05D006802 9.2e-116 420.6 224 96.0
Dinv38097 Davidia involucrata HOM05D005526 ORTHO05D006802 1.1e-95 354.0 222 79.7
CiPaw.01G244400 Carya illinoinensis HOM05D005526 ORTHO05D006802 2.9e-93 345.9 225 78.7
GSVIVG01017251001 Vitis vinifera HOM05D005526 ORTHO05D006802 1.4e-92 343.6 222 77.5
QL05p027824 Quercus lobata HOM05D005526 ORTHO05D006802 1.5e-89 333.6 220 75.5
TWI18G0833 Tripterygium wilfordii HOM05D005526 ORTHO05D006802 3.3e-89 332.4 220 77.3
TWI75G1755 Tripterygium wilfordii HOM05D005526 ORTHO05D006802 1.4e-87 327.0 220 76.4
Actinidia08810 Actinidia chinensis HOM05D005526 ORTHO05D006802 2.6e-86 322.8 222 74.8
Atru.chr1.3093 Acer truncatum HOM05D005526 ORTHO05D006802 1.7e-85 320.1 224 73.2
Lj5C68G25 Lonicera japonica HOM05D005526 ORTHO05D006802 1.7e-85 320.1 226 72.1
Thecc.06G073100 Theobroma cacao HOM05D005526 ORTHO05D006802 6.4e-85 318.2 222 73.9
CSS0037293 Camellia sinensis var. sinensis HOM05D005526 ORTHO05D006802 8.4e-85 317.8 217 74.7
TAR383G0281 Trochodendron aralioides HOM05D005526 ORTHO05D006802 8.4e-85 317.8 222 73.0
MD09G1221000 Malus domestica HOM05D005526 ORTHO05D006802 1.4e-84 317.0 222 73.9
Potri.001G172800 Populus trichocarpa HOM05D005526 ORTHO05D006802 4.2e-84 315.5 228 72.4
MD17G1204400 Malus domestica HOM05D005526 ORTHO05D006802 5.5e-84 315.1 222 73.0
Prupe.3G079900 Prunus persica HOM05D005526 ORTHO05D006802 7.1e-84 314.7 234 69.7
Duzib235G1092 Durio zibethinus HOM05D005526 ORTHO05D006802 4.6e-83 312.0 222 73.0
Gohir.D06G117200 Gossypium hirsutum HOM05D005526 ORTHO05D006802 7.9e-83 311.2 222 73.4
arahy.Tifrunner.gnm1.ann1.FYL3MV Arachis hypogaea HOM05D005526 ORTHO05D006802 1.0e-82 310.8 221 71.5
Gorai.010G134800 Gossypium raimondii HOM05D005526 ORTHO05D006802 2.3e-82 309.7 222 73.0
Gohir.A06G112600 Gossypium hirsutum HOM05D005526 ORTHO05D006802 5.1e-82 308.5 222 73.9
RcHm_v2.0_Chr2g0136621 Rosa chinensis HOM05D005526 ORTHO05D006802 1.5e-81 307.0 224 72.3
FvH4_6g30340 Fragaria vesca HOM05D005526 ORTHO05D006802 1.9e-81 306.6 224 70.5
Glyma.15G010400 Glycine max HOM05D005526 ORTHO05D006802 2.5e-81 306.2 221 71.0
FAN02G2127 Fragaria x ananassa HOM05D005526 ORTHO05D006802 4.3e-81 305.4 224 70.5
Manes.04G116500 Manihot esculenta HOM05D005526 ORTHO05D006802 4.3e-81 305.4 222 70.3
CSS0003126 Camellia sinensis var. sinensis HOM05D005526 ORTHO05D006802 2.1e-80 303.1 226 73.5
Glyma.13G363400 Glycine max HOM05D005526 ORTHO05D006802 1.1e-79 300.8 221 70.1
Nn2g11952 Nelumbo nucifera HOM05D005526 ORTHO05D006802 3.1e-79 299.3 222 68.0
Ciclev10025661m.g Citrus clementina HOM05D005526 ORTHO05D006802 1.5e-78 297.0 221 71.0
Lalb_Chr14g0373681 Lupinus albus HOM05D005526 ORTHO05D006802 3.4e-78 295.8 221 70.1
COL.COLO4_12896 Corchorus olitorius HOM05D005526 ORTHO05D006802 1.3e-77 293.9 226 70.4
MBI01_g11875_MAGBIO Magnolia biondii HOM05D005526 ORTHO05D006802 1.2e-75 287.3 223 69.5
CANSAT56G0953 Cannabis sativa HOM05D005526 ORTHO05D006802 2.1e-75 286.6 224 68.8
MELO3C017901.2 Cucumis melo HOM05D005526 ORTHO05D006802 1.8e-74 283.5 221 66.1
DCAR_025483 Daucus carota HOM05D005526 ORTHO05D006802 1.8e-74 283.5 224 65.2
CsaV3_4G001390 Cucumis sativus L. HOM05D005526 ORTHO05D006802 3.9e-74 282.3 221 66.1
Lj3g0017842 Lotus japonicus HOM05D005526 ORTHO05D006802 6.7e-74 281.6 221 69.2
Ca_01085_v3 Cicer arietinum L. HOM05D005526 ORTHO05D006802 1.3e-72 277.3 224 67.0
Sed0002477 Sechium edule HOM05D005526 ORTHO05D006802 2.8e-72 276.2 221 64.3
Aqoxy7G02084 Aquilegia oxysepala HOM05D005526 ORTHO05D006802 4.8e-72 275.4 220 65.0
vmacro16915 Vaccinium macrocarpon HOM05D005526 ORTHO05D006802 4.8e-72 275.4 318 52.8
HanXRQChr10g0303071 Helianthus annuus HOM05D005526 ORTHO05D006802 1.8e-71 273.5 220 66.8
Cpa.g.sc336.8 Carica papaya HOM05D005526 ORTHO05D006802 2.4e-71 273.1 222 65.3
PSO170G3249 Papaver somniferum HOM05D005526 ORTHO05D006802 2.4e-71 273.1 218 64.2
Phvul.005G174900 Phaseolus vulgaris HOM05D005526 ORTHO05D006802 2.4e-71 273.1 222 67.1
Rhsim12G0193000 Rhododendron simsii HOM05D005526 ORTHO05D006802 2.4e-71 273.1 302 54.3
Cc04_g04020 Coffea canephora HOM05D005526 ORTHO05D006802 4.1e-71 272.3 224 65.2
ECA234G2940 Erigeron canadensis HOM05D005526 ORTHO05D006802 2.6e-70 269.6 218 66.1
FAN09G0405 Fragaria x ananassa HOM05D005526 ORTHO05D006802 4.5e-70 268.9 224 66.1
ClCG07G012810 Citrullus lanatus HOM05D005526 ORTHO05D006802 5.9e-70 268.5 221 64.7
Nitab4.5_0000620g0060 Nicotiana tabacum HOM05D005526 ORTHO05D006802 7.7e-70 268.1 222 66.7
Hund06580 Selenicereus undatus HOM05D005526 ORTHO05D006802 1.3e-69 267.3 212 67.5
CAN.G395.46 Capsicum annuum HOM05D005526 ORTHO05D006802 1.7e-69 266.9 222 66.2
Medtr2g103110 Medicago truncatula HOM05D005526 ORTHO05D006802 3.8e-69 265.8 229 63.8
Solyc06g067990.3 Solanum lycopersicum HOM05D005526 ORTHO05D006802 6.5e-69 265.0 222 64.9
Sopen06g025270 Solanum pennellii HOM05D005526 ORTHO05D006802 2.5e-68 263.1 222 64.4
Psat5g300440 Pisum sativum HOM05D005526 ORTHO05D006802 1.6e-67 260.4 223 63.2
Peaxi162Scf00207g00731 Petunia axillaris HOM05D005526 ORTHO05D006802 2.7e-67 259.6 222 62.6
Eucgr.J03045 Eucalyptus grandis HOM05D005526 ORTHO05D006802 7.9e-67 258.1 225 62.2
AUR62011560 Chenopodium quinoa HOM05D005526 ORTHO05D006802 3.9e-66 255.8 209 66.5
AUR62016379 Chenopodium quinoa HOM05D005526 ORTHO05D006802 6.7e-66 255.0 209 66.5
VMungo1080G0636 Vigna mungo HOM05D005526 ORTHO05D006802 6.7e-66 255.0 216 62.5
Oeu052283.1 Olea europaea HOM05D005526 ORTHO05D006802 2.0e-65 253.4 223 61.9
Lsat_1_v5_gn_5_132520 Lactuca sativa HOM05D005526 ORTHO05D006802 2.8e-64 249.6 218 63.3
Oeu063802.2 Olea europaea HOM05D005526 ORTHO05D006802 3.7e-64 249.2 223 62.3
TPR.G37284 Trifolium pratense HOM05D005526 ORTHO05D006802 3.7e-64 249.2 229 60.3
Sc10g0005720 Simmondsia chinensis HOM05D005526 ORTHO05D006802 4.8e-64 248.8 208 63.5
SalBow2G2365 Salvia bowleyana HOM05D005526 ORTHO05D006802 8.2e-64 248.1 222 61.7
THA.LOC104812497 Tarenaya hassleriana HOM05D005526 ORTHO05D006802 8.2e-64 248.1 211 63.5
EL10Ac9g21940 Beta vulgaris HOM05D005526 ORTHO05D006802 4.1e-63 245.7 207 65.2
MSTRG.9436 Avicennia marina HOM05D005526 ORTHO05D006802 1.5e-62 243.8 221 60.2
PGR031G1627 Punica granatum HOM05D005526 ORTHO05D006802 2.0e-62 243.4 232 57.8
FAN14G4362 Fragaria x ananassa HOM05D005526 ORTHO05D006802 2.2e-61 240.0 224 60.3
Sp5g35600 Schrenkiella parvula HOM05D005526 ORTHO05D006802 3.2e-60 236.1 190 62.6
BcaB02g07290 Brassica carinata HOM05D005526 ORTHO05D006802 3.6e-59 232.6 189 63.5
Aa31LG4G500 Aethionema arabicum HOM05D005526 ORTHO05D006802 6.1e-59 231.9 190 63.2
Migut.D01055 Erythranthe guttata HOM05D005526 ORTHO05D006802 1.0e-58 231.1 224 59.4
Thhalv10018648m.g Eutrema salsugineum HOM05D005526 ORTHO05D006802 1.0e-58 231.1 190 63.2
AL2G41300 Arabidopsis lyrata HOM05D005526 ORTHO05D006802 1.8e-58 230.3 190 63.2
AL3G17940 Arabidopsis lyrata HOM05D005526 ORTHO05D006802 1.8e-58 230.3 190 62.1
Ah.01g020810 Amaranthus hybridus HOM05D005526 ORTHO05D006802 4.4e-57 225.7 192 63.5
arahy.Tifrunner.gnm1.ann1.IMA97E Arachis hypogaea HOM05D005526 ORTHO05D006802 5.7e-57 225.3 242 54.1
CARHR074270 Cardamine hirsuta HOM05D005526 ORTHO05D006802 3.7e-56 222.6 223 55.2
BraA07t30300Z Brassica rapa HOM05D005526 ORTHO05D006802 8.2e-56 221.5 190 62.1
ATR1156G007 Amborella trichopoda HOM05D005526 ORTHO05D006802 1.8e-55 220.3 221 55.2
AT3G06820 Arabidopsis thaliana HOM05D005526 ORTHO05D006802 1.8e-55 220.3 198 60.6
Carub.0002s2731 Capsella rubella HOM05D005526 ORTHO05D006802 3.1e-55 219.5 201 57.2
A07p26570 Brassica napus HOM05D005526 ORTHO05D006802 4.1e-55 219.2 190 61.6
BcaC08g45297 Brassica carinata HOM05D005526 ORTHO05D006802 7.0e-55 218.4 190 61.6
C06p28990 Brassica napus HOM05D005526 ORTHO05D006802 7.0e-55 218.4 190 61.6
BolC6t38065H Brassica oleracea HOM05D005526 ORTHO05D006802 7.0e-55 218.4 190 61.6
Dinv30571 Davidia involucrata HOM05D005526 ORTHO05D006802 2.0e-54 216.9 144 73.6
SGA_v2.0_scaffold16G07615 Striga asiatica HOM05D005526 ORTHO05D006802 1.1e-52 211.1 192 56.2
Os05g0542600 Oryza sativa ssp. japonica HOM05D005526 ORTHO05D006802 2.1e-51 206.8 213 51.2
Nitab4.5_0013710g0010 Nicotiana tabacum HOM05D005526 ORTHO05D006802 3.0e-50 203.0 222 57.2
AT1G80210 Arabidopsis thaliana HOM05D005526 ORTHO05D006802 3.3e-49 199.5 156 64.7
CDE02G1452 Ceratophyllum demersum HOM05D005526 ORTHO05D006802 8.2e-48 194.9 173 61.8
unitig_899.g14780 Utricularia gibba HOM05D005526 ORTHO05D006802 8.2e-48 194.9 156 61.5
CiPaw.02G154800 Carya illinoinensis HOM05D005526 ORTHO05D006802 1.7e-45 187.2 108 85.2
SEGI_35764 Sequoiadendron giganteum HOM05D005526 ORTHO05D006802 2.9e-45 186.4 220 46.8
HPP92_009843 Vanilla planifolia HOM05D005526 ORTHO05D006802 3.8e-45 186.0 168 54.2
Zm00001eb294490 Zea mays HOM05D005526 ORTHO05D006802 6.5e-45 185.3 215 48.8
Sed0012845 Sechium edule HOM05D005526 ORTHO05D006802 1.3e-32 144.4 215 44.2
Mapoly0053s0043 Marchantia polymorpha HOM05D005526 ORTHO05D006802 1.2e-30 137.9 186 43.0
SGA_v2.0_scaffold37G14789 Striga asiatica HOM05D005526 ORTHO05D006802 2.0e-30 137.1 181 46.4
Pp3c27_4740 Physcomitrium patens HOM05D005526 ORTHO05D006802 3.3e-28 129.8 147 47.6
CBR_g46861 Chara braunii HOM05D005526 ORTHO05D006802 2.3e-26 123.6 214 36.4
AagrBONN_evm.TU.Sc2ySwM_368.2431 Anthoceros agrestis HOM05D005526 ORTHO05D006802 3.4e-25 119.8 177 39.5
CDE01G0292 Ceratophyllum demersum HOM05D005526 ORTHO05D006802 3.9e-21 106.3 203 39.4
SMO196G0028 Selaginella moellendorffii HOM05D005526 ORTHO05D006802 3.9e-21 106.3 141 39.7
Pp3c25_2940 Physcomitrium patens HOM05D005526 ORTHO05D311957 3.6e-11 73.2 90 45.6
Pp3c6_24500 Physcomitrium patens HOM05D005526 ORTHO05D006802 3.4e-09 66.6 73 46.6


User provided reference genes

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