Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_01304 Corylus avellana HOM05D006900 ORTHO05D008651 1.1e-207 727.2 647 100.0
Cfa015319 Carpinus fangiana HOM05D006900 ORTHO05D008651 7.2e-188 661.4 649 94.3
QL06p012004 Quercus lobata HOM05D006900 ORTHO05D008651 2.8e-123 446.8 665 79.4
CiPaw.02G075100 Carya illinoinensis HOM05D006900 ORTHO05D008651 1.4e-114 417.9 642 77.9
Prupe.1G117800 Prunus persica HOM05D006900 ORTHO05D008651 2.9e-112 410.2 645 75.7
MD13G1154800 Malus domestica HOM05D006900 ORTHO05D008651 2.3e-109 400.6 640 76.2
GSVIVG01034997001 Vitis vinifera HOM05D006900 ORTHO05D008651 5.3e-106 389.4 642 76.0
Thecc.04G300100 Theobroma cacao HOM05D006900 ORTHO05D008651 1.5e-105 387.9 645 76.0
TAR362G0296 Trochodendron aralioides HOM05D006900 ORTHO05D008651 1.2e-102 378.3 655 74.5
Gohir.A10G171600 Gossypium hirsutum HOM05D006900 ORTHO05D008651 2.7e-102 377.1 641 75.0
Gorai.011G199800 Gossypium raimondii HOM05D006900 ORTHO05D008651 3.6e-102 376.7 642 74.9
Duzib212G0988 Durio zibethinus HOM05D006900 ORTHO05D008651 6.1e-102 375.9 642 74.5
Gohir.D10G178700 Gossypium hirsutum HOM05D006900 ORTHO05D008651 5.1e-101 372.9 642 74.6
FAN07G1219 Fragaria x ananassa HOM05D006900 ORTHO05D008651 3.3e-100 370.2 615 75.9
Hma1.2p1_0013F.1_g008570 Hydrangea macrophylla HOM05D006900 ORTHO05D008651 4.8e-99 366.3 652 73.0
FvH4_4g19660 Fragaria vesca HOM05D006900 ORTHO05D008651 6.9e-98 362.5 617 75.0
CSS0034541 Camellia sinensis var. sinensis HOM05D006900 ORTHO05D008651 9.1e-98 362.1 659 73.1
arahy.Tifrunner.gnm1.ann1.Z0RY6M Arachis hypogaea HOM05D006900 ORTHO05D008651 1.5e-97 361.3 653 73.5
RcHm_v2.0_Chr4g0425111 Rosa chinensis HOM05D006900 ORTHO05D008651 4.5e-97 359.8 619 75.6
Peaxi162Scf00681g00223 Petunia axillaris HOM05D006900 ORTHO05D008651 1.0e-96 358.6 670 70.6
FAN12G3178 Fragaria x ananassa HOM05D006900 ORTHO05D008651 2.5e-95 354.0 617 74.4
Glyma.17G033400 Glycine max HOM05D006900 ORTHO05D008651 7.2e-95 352.4 642 72.6
Lj4g0008712 Lotus japonicus HOM05D006900 ORTHO05D008651 7.2e-95 352.4 647 72.5
ClCG05G006560 Citrullus lanatus HOM05D006900 ORTHO05D008651 1.2e-94 351.7 635 72.8
Nn3g21725 Nelumbo nucifera HOM05D006900 ORTHO05D008651 1.2e-94 351.7 673 71.6
arahy.Tifrunner.gnm1.ann1.88EKIY Arachis hypogaea HOM05D006900 ORTHO05D008651 1.6e-94 351.3 656 72.7
Potri.010G145000 Populus trichocarpa HOM05D006900 ORTHO05D008651 1.6e-94 351.3 654 71.3
Atru.chr4.3007 Acer truncatum HOM05D006900 ORTHO05D008651 2.1e-94 350.9 625 75.0
CANSAT64G2951 Cannabis sativa HOM05D006900 ORTHO05D008651 2.1e-94 350.9 636 73.4
Glyma.07G240000 Glycine max HOM05D006900 ORTHO05D008651 2.1e-94 350.9 638 72.9
PGR004G2297 Punica granatum HOM05D006900 ORTHO05D008651 6.1e-94 349.4 641 73.0
COL.COLO4_34620 Corchorus olitorius HOM05D006900 ORTHO05D008651 7.9e-94 349.0 614 74.6
Sabra10G0112000 Salix brachista HOM05D006900 ORTHO05D008651 1.4e-93 348.2 655 72.1
VMungo1215G0487 Vigna mungo HOM05D006900 ORTHO05D008651 1.4e-93 348.2 649 71.3
TWI09G0824 Tripterygium wilfordii HOM05D006900 ORTHO05D008651 3.0e-93 347.1 628 72.1
Actinidia13360 Actinidia chinensis HOM05D006900 ORTHO05D008651 3.9e-93 346.7 654 71.3
Manes.03G204600 Manihot esculenta HOM05D006900 ORTHO05D008651 5.1e-93 346.3 645 72.1
Dinv15174 Davidia involucrata HOM05D006900 ORTHO05D008651 3.3e-92 343.6 542 82.3
Eucgr.H04042 Eucalyptus grandis HOM05D006900 ORTHO05D008651 3.3e-92 343.6 585 68.2
Lalb_Chr07g0182071 Lupinus albus HOM05D006900 ORTHO05D008651 4.4e-92 343.2 650 72.2
Lj6A690T75 Lonicera japonica HOM05D006900 ORTHO05D008651 1.3e-91 341.7 647 72.0
Solyc04g009020.4 Solanum lycopersicum HOM05D006900 ORTHO05D008651 1.3e-91 341.7 676 68.2
CsaV3_3G015170 Cucumis sativus L. HOM05D006900 ORTHO05D008651 2.8e-91 340.5 634 72.1
Medtr4g122060 Medicago truncatula HOM05D006900 ORTHO05D008651 3.7e-91 340.1 660 69.4
CAN.G274.12 Capsicum annuum HOM05D006900 ORTHO05D008651 2.4e-90 337.4 674 68.4
Migut.G00056 Erythranthe guttata HOM05D006900 ORTHO05D008651 2.4e-90 337.4 649 71.5
Nitab4.5_0004979g0030 Nicotiana tabacum HOM05D006900 ORTHO05D008651 2.4e-90 337.4 686 67.9
PGSC0003DMG400011531 Solanum tuberosum HOM05D006900 ORTHO05D008651 9.1e-90 335.5 668 68.3
Ciclev10004521m.g Citrus clementina HOM05D006900 ORTHO05D008651 1.2e-89 335.1 642 71.8
Lsat_1_v5_gn_6_18120 Lactuca sativa HOM05D006900 ORTHO05D008651 3.5e-89 333.6 659 70.6
Sopen04g004200 Solanum pennellii HOM05D006900 ORTHO05D008651 3.5e-89 333.6 675 68.0
MELO3C006715.2 Cucumis melo HOM05D006900 ORTHO05D008651 4.5e-89 333.2 634 72.1
HanXRQChr13g0393421 Helianthus annuus HOM05D006900 ORTHO05D008651 7.7e-89 332.4 630 72.9
Cc03_g00870 Coffea canephora HOM05D006900 ORTHO05D008651 2.9e-88 330.5 674 69.9
Nitab4.5_0010299g0060 Nicotiana tabacum HOM05D006900 ORTHO05D008651 3.8e-88 330.1 717 52.6
THA.LOC104820304 Tarenaya hassleriana HOM05D006900 ORTHO05D008651 5.0e-88 329.7 632 71.8
SGA_v2.0_scaffold104G30080 Striga asiatica HOM05D006900 ORTHO05D008651 2.1e-86 324.3 659 69.3
MBI18_g32026_MAGBIO Magnolia biondii HOM05D006900 ORTHO05D008651 3.0e-85 320.5 545 79.4
Carub.0003s1679 Capsella rubella HOM05D006900 ORTHO05D008651 5.2e-85 319.7 623 70.9
ECA233G1261 Erigeron canadensis HOM05D006900 ORTHO05D008651 2.0e-84 317.8 542 79.5
Thhalv10020271m.g Eutrema salsugineum HOM05D006900 ORTHO05D008651 7.4e-84 315.8 647 68.8
MSTRG.10150 Avicennia marina HOM05D006900 ORTHO05D008651 9.7e-84 315.5 657 69.3
Phvul.003G114100 Phaseolus vulgaris HOM05D006900 ORTHO05D008651 2.2e-83 314.3 622 71.1
unitig_748.g8700 Utricularia gibba HOM05D006900 ORTHO05D008651 6.3e-83 312.8 609 71.8
A05p32690 Brassica napus HOM05D006900 ORTHO05D008651 1.4e-82 311.6 607 71.0
BraA05t22092Z Brassica rapa HOM05D006900 ORTHO05D008651 7.0e-82 309.3 634 69.1
Psat0s740g0280 Pisum sativum HOM05D006900 ORTHO05D008651 9.1e-82 308.9 584 73.5
Aa31LG8G4070 Aethionema arabicum HOM05D006900 ORTHO05D008651 2.0e-81 307.8 644 68.5
CDE12G0762 Ceratophyllum demersum HOM05D006900 ORTHO05D008651 2.0e-81 307.8 641 69.6
Rhsim02G0004000 Rhododendron simsii HOM05D006900 ORTHO05D008651 3.5e-81 307.0 702 44.9
BcaB06g25797 Brassica carinata HOM05D006900 ORTHO05D008651 5.9e-81 306.2 644 68.6
C05p49400 Brassica napus HOM05D006900 ORTHO05D008651 7.7e-81 305.8 644 68.2
AL3G30020 Arabidopsis lyrata HOM05D006900 ORTHO05D008651 1.3e-80 305.1 625 69.9
BcaC05g28835 Brassica carinata HOM05D006900 ORTHO05D008651 2.2e-80 304.3 619 70.1
BolC5t33686H Brassica oleracea HOM05D006900 ORTHO05D008651 2.2e-80 304.3 619 70.1
Sp3g15260 Schrenkiella parvula HOM05D006900 ORTHO05D008651 2.9e-80 303.9 644 69.1
CARHR092290 Cardamine hirsuta HOM05D006900 ORTHO05D008651 3.8e-80 303.5 640 67.7
Aqoxy5G02843 Aquilegia oxysepala HOM05D006900 ORTHO05D008651 2.5e-79 300.8 543 76.8
AUR62016204 Chenopodium quinoa HOM05D006900 ORTHO05D008651 5.5e-79 299.7 531 79.3
Sed0008833 Sechium edule HOM05D006900 ORTHO05D008651 7.2e-79 299.3 554 77.1
AUR62039284 Chenopodium quinoa HOM05D006900 ORTHO05D008651 9.4e-79 298.9 531 79.3
PSO170G0176 Papaver somniferum HOM05D006900 ORTHO05D008651 1.8e-77 294.7 545 76.7
Ah.04g156910 Amaranthus hybridus HOM05D006900 ORTHO05D008651 5.2e-77 293.1 636 69.8
ATR0693G010 Amborella trichopoda HOM05D006900 ORTHO05D008651 1.2e-76 292.0 646 68.6
vmacro15184 Vaccinium macrocarpon HOM05D006900 ORTHO05D008651 1.2e-76 292.0 664 68.8
PSO357G0537 Papaver somniferum HOM05D006900 ORTHO05D008651 2.6e-76 290.8 679 66.3
TPR.G16830 Trifolium pratense HOM05D006900 ORTHO05D008651 3.1e-74 283.9 652 55.4
EL10Ac3g05503 Beta vulgaris HOM05D006900 ORTHO05D008651 7.0e-74 282.7 552 40.8
Sc15g0003210 Simmondsia chinensis HOM05D006900 ORTHO05D008651 3.5e-73 280.4 567 74.3
Zm00001eb014810 Zea mays HOM05D006900 ORTHO05D008651 2.9e-72 277.3 520 77.9
Ca_21442_v3 Cicer arietinum L. HOM05D006900 ORTHO05D008651 6.8e-69 266.2 254 59.1
DCAR_030472 Daucus carota HOM05D006900 ORTHO05D008651 1.4e-66 258.5 640 62.3
Hund03124 Selenicereus undatus HOM05D006900 ORTHO05D008651 2.5e-63 247.7 676 60.1
CDE01G0483 Ceratophyllum demersum HOM05D006900 ORTHO05D008651 1.6e-62 245.0 644 62.6
Hma1.2p1_0013F.1_g008580 Hydrangea macrophylla HOM05D006900 ORTHO05D008651 1.5e-60 238.4 451 78.0
SalBow8G4068 Salvia bowleyana HOM05D006900 ORTHO05D008651 1.7e-59 235.0 217 59.9
AT3G17040 Arabidopsis thaliana HOM05D006900 ORTHO05D008651 2.3e-56 224.6 271 49.1
Os03g0308800 Oryza sativa ssp. japonica HOM05D006900 ORTHO05D008651 1.3e-48 198.7 157 59.9
SEGI_12330 Sequoiadendron giganteum HOM05D006900 ORTHO05D008651 9.5e-47 192.6 482 75.1
CANSAT78G0722 Cannabis sativa HOM05D006900 ORTHO05D008651 1.1e-42 179.1 251 47.4
Cpa.g.sc9.62 Carica papaya HOM05D006900 ORTHO05D008651 8.1e-38 162.9 199 61.3
Mapoly0078s0010 Marchantia polymorpha HOM05D006900 ORTHO05D008651 1.4e-34 152.1 165 46.7
Gohir.A10G171900 Gossypium hirsutum HOM05D006900 ORTHO05D008651 2.7e-33 147.9 198 49.5
AagrBONN_evm.TU.Sc2ySwM_368.516 Anthoceros agrestis HOM05D006900 ORTHO05D008651 4.6e-33 147.1 140 53.6
SMO115G0152 Selaginella moellendorffii HOM05D006900 ORTHO05D008651 3.6e-30 137.5 110 60.0
CBR_g12177 Chara braunii HOM05D006900 ORTHO05D008651 1.4e-29 135.6 160 46.2
Pp3c1_20310 Physcomitrium patens HOM05D006900 ORTHO05D008651 3.1e-29 134.4 164 43.3
CSS0028196 Camellia sinensis var. sinensis HOM05D006900 ORTHO05D008651 2.6e-28 131.3 83 78.3
Gohir.A10G171950 Gossypium hirsutum HOM05D006900 ORTHO05D008651 4.4e-28 130.6 111 61.3
CSS0035140 Camellia sinensis var. sinensis HOM05D006900 ORTHO05D008651 2.9e-27 127.9 83 75.9
Cpa.g.sc9.61 Carica papaya HOM05D006900 ORTHO05D008651 2.4e-26 124.8 166 48.8
Oeu032012.1 Olea europaea HOM05D006900 ORTHO05D008651 3.1e-21 107.8 100 60.0
MCO01G208 Micromonas commoda HOM05D006900 ORTHO05D008651 5.4e-18 97.1 117 44.4
Cre09.g416200 Chlamydomonas reinhardtii HOM05D006900 ORTHO05D008651 7.1e-18 96.7 198 33.3
SGA_v2.0_scaffold157G37400 Striga asiatica HOM05D006900 ORTHO05D008651 3.6e-14 84.3 177 36.2
Oeu032144.1 Olea europaea HOM05D006900 ORTHO05D008651 3.1e-13 81.3 74 90.5
PRCOL_00006040 Prasinoderma coloniale HOM05D001216 ORTHO05D005688 4.0e-13 80.9 143 34.3


User provided reference genes

Program Settings