Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_00226 Corylus avellana HOM05D005626 ORTHO05D007372 0.0e+00 1125.2 766 100.0
Cfa016215 Carpinus fangiana HOM05D005626 ORTHO05D007372 6.8e-193 678.3 571 85.6
QL09p007984 Quercus lobata HOM05D005626 ORTHO05D007372 5.3e-145 519.2 558 73.5
CiPaw.06G045100 Carya illinoinensis HOM05D005626 ORTHO05D007372 5.8e-136 489.2 565 70.8
QL09p008055 Quercus lobata HOM05D005626 ORTHO05D007372 6.7e-132 475.7 527 64.5
GSVIVG01038569001 Vitis vinifera HOM05D005626 ORTHO05D007372 1.3e-124 451.4 544 64.5
Prupe.2G313200 Prunus persica HOM05D005626 ORTHO05D007372 6.1e-117 426.0 552 65.9
Atru.chr12.2245_Atru.chr12.2244 Acer truncatum HOM05D005626 ORTHO05D007372 1.1e-115 421.8 500 59.6
Manes.06G012351 Manihot esculenta HOM05D005626 ORTHO05D007372 1.5e-115 421.4 546 54.0
CANSAT21G0821 Cannabis sativa HOM05D005626 ORTHO05D007372 5.7e-115 419.5 574 55.1
Actinidia18659 Actinidia chinensis HOM05D005626 ORTHO05D007372 1.4e-113 414.8 550 60.2
Thecc.03G201200 Theobroma cacao HOM05D005626 ORTHO05D007372 1.2e-112 411.8 552 63.6
CSS0044766 Camellia sinensis var. sinensis HOM05D005626 ORTHO05D007372 7.2e-110 402.5 515 63.3
MD01G1222800 Malus domestica HOM05D005626 ORTHO05D007372 1.2e-109 401.7 543 64.5
Gohir.D09G179900 Gossypium hirsutum HOM05D005626 ORTHO05D007372 4.6e-109 399.8 511 66.3
Gorai.006G201900 Gossypium raimondii HOM05D005626 ORTHO05D007372 3.9e-108 396.7 587 60.0
CSS0003989 Camellia sinensis var. sinensis HOM05D005626 ORTHO05D007372 8.8e-108 395.6 602 49.8
FAN03G2656 Fragaria x ananassa HOM05D005626 ORTHO05D007032 3.3e-107 393.7 598 52.2
FvH4_7g31990 Fragaria vesca HOM05D005626 ORTHO05D007372 5.7e-107 392.9 441 64.9
FAN06G4319 Fragaria x ananassa HOM05D005626 ORTHO05D007372 7.4e-107 392.5 459 63.2
RcHm_v2.0_Chr1g0381501 Rosa chinensis HOM05D005626 ORTHO05D007372 9.7e-107 392.1 444 64.2
THA.LOC104799967 Tarenaya hassleriana HOM05D005626 ORTHO05D007372 2.6e-104 384.0 523 62.5
Dinv29256 Davidia involucrata HOM05D005626 ORTHO05D007372 3.4e-104 383.6 538 53.7
MBI07_g24765_MAGBIO Magnolia biondii HOM05D005626 ORTHO05D007372 1.0e-103 382.1 558 50.7
TWI39G0896 Tripterygium wilfordii HOM05D005626 ORTHO05D007372 1.6e-101 374.8 533 61.0
TAR375G0360 Trochodendron aralioides HOM05D005626 ORTHO05D007372 7.9e-101 372.5 564 60.5
Manes.06G011400 Manihot esculenta HOM05D005626 ORTHO05D007372 1.0e-100 372.1 452 58.2
Hund11648 Selenicereus undatus HOM05D005626 ORTHO05D007372 3.0e-100 370.5 552 58.9
COL.COLO4_16792 Corchorus olitorius HOM05D005626 ORTHO05D007032 6.7e-100 369.4 552 60.0
Migut.F00199 Erythranthe guttata HOM05D005626 ORTHO05D007372 4.4e-99 366.7 541 49.7
AUR62006074 Chenopodium quinoa HOM05D005626 ORTHO05D007372 4.8e-98 363.2 522 59.0
Cc02_g01370 Coffea canephora HOM05D005626 ORTHO05D007372 5.3e-97 359.8 507 47.5
arahy.Tifrunner.gnm1.ann1.ULB6CG Arachis hypogaea HOM05D005626 ORTHO05D007372 5.9e-96 356.3 515 59.2
TPR.G33639 Trifolium pratense HOM05D005626 ORTHO05D007372 1.0e-95 355.5 431 58.2
Hma1.2p1_2307F.1_g319430 Hydrangea macrophylla HOM05D005626 ORTHO05D007372 8.5e-95 352.4 521 62.2
Potri.015G010800 Populus trichocarpa HOM05D005626 ORTHO05D007372 1.4e-92 345.1 538 50.2
Duzib084G0104 Durio zibethinus HOM05D005626 ORTHO05D007372 1.1e-91 342.0 552 59.1
VMungo1309G2515 Vigna mungo HOM05D005626 ORTHO05D007372 1.5e-91 341.7 534 58.2
arahy.Tifrunner.gnm1.ann1.CHU3M4 Arachis hypogaea HOM05D005626 ORTHO05D007372 5.7e-91 339.7 533 58.0
Hma1.2p1_0591F.1_g185250 Hydrangea macrophylla HOM05D005626 ORTHO05D007372 9.7e-91 339.0 532 60.2
Oeu010695.1 Olea europaea HOM05D005626 ORTHO05D007372 2.4e-89 334.3 434 56.5
Phvul.009G051300 Phaseolus vulgaris HOM05D005626 ORTHO05D007372 4.1e-89 333.6 432 56.5
Psat5g076080 Pisum sativum HOM05D005626 ORTHO05D007372 3.2e-86 323.9 427 56.7
Glyma.04G234300 Glycine max HOM05D005626 ORTHO05D007372 4.2e-86 323.6 522 58.6
Ca_16720_v3 Cicer arietinum L. HOM05D005626 ORTHO05D007372 7.2e-86 322.8 522 57.1
arahy.Tifrunner.gnm1.ann1.DCMH6Q Arachis hypogaea HOM05D005626 ORTHO05D007372 1.2e-85 322.0 439 63.1
Lj1g0019302 Lotus japonicus HOM05D005626 ORTHO05D007372 2.1e-85 321.2 538 55.2
AUR62035551 Chenopodium quinoa HOM05D005626 ORTHO05D007372 1.8e-84 318.2 553 49.2
Sopen03g022800 Solanum pennellii HOM05D005626 ORTHO05D007372 2.3e-84 317.8 437 51.9
PGR042G1168 Punica granatum HOM05D005626 ORTHO05D007372 1.2e-83 315.5 505 57.8
Solyc03g082990.3 Solanum lycopersicum HOM05D005626 ORTHO05D007372 1.5e-83 315.1 437 51.7
Ciclev10020013m.g Citrus clementina HOM05D005626 ORTHO05D007372 2.0e-83 314.7 453 61.1
CAN.G481.28 Capsicum annuum HOM05D005626 ORTHO05D007372 4.4e-83 313.5 437 51.7
ClCG01G000360 Citrullus lanatus HOM05D005626 ORTHO05D007372 4.8e-82 310.1 534 47.9
Sed0007830 Sechium edule HOM05D005626 ORTHO05D007372 4.8e-82 310.1 533 53.7
AT5G53080 Arabidopsis thaliana HOM05D005626 ORTHO05D007372 1.1e-81 308.9 511 58.5
Nn1g00302 Nelumbo nucifera HOM05D005626 ORTHO05D007372 1.1e-81 308.9 539 55.7
Nitab4.5_0005491g0050 Nicotiana tabacum HOM05D005626 ORTHO05D007372 1.1e-81 308.9 544 45.0
FAN10G0040 Fragaria x ananassa HOM05D005626 ORTHO05D009683 3.1e-81 307.4 514 51.0
Gohir.A09G185000 Gossypium hirsutum HOM05D005626 ORTHO05D007372 4.1e-81 307.0 315 69.8
CDE02G3804 Ceratophyllum demersum HOM05D005626 ORTHO05D007372 1.5e-78 298.5 353 57.8
Aa31LG3G9390 Aethionema arabicum HOM05D005626 ORTHO05D007372 2.5e-78 297.7 504 58.5
Ah.07g205460 Amaranthus hybridus HOM05D005626 ORTHO05D007372 2.1e-77 294.7 622 48.4
Peaxi162Scf00740g00226 Petunia axillaris HOM05D005626 ORTHO05D007372 3.0e-76 290.8 437 48.5
EL10Ac3g05260 Beta vulgaris HOM05D005626 ORTHO05D007372 4.0e-76 290.4 592 43.4
HPP92_005288 Vanilla planifolia HOM05D005626 ORTHO05D007372 4.4e-75 287.0 351 56.4
Carub.0008s1328 Capsella rubella HOM05D005626 ORTHO05D007372 7.5e-75 286.2 526 55.3
AL8G27710 Arabidopsis lyrata HOM05D005626 ORTHO05D007372 1.3e-74 285.4 560 53.0
CsaV3_5G000430 Cucumis sativus L. HOM05D005626 ORTHO05D007372 2.2e-74 284.6 519 47.8
FAN10G2571 Fragaria x ananassa HOM05D005626 ORTHO05D007372 2.2e-74 284.6 532 48.7
Medtr3g091780 Medicago truncatula HOM05D005626 ORTHO05D007372 3.7e-74 283.9 432 51.6
Cpa.g.sc3.101 Carica papaya HOM05D005626 ORTHO05D007372 1.4e-73 282.0 531 55.9
Sp6g15250 Schrenkiella parvula HOM05D005626 ORTHO05D007372 1.4e-73 282.0 532 55.3
unitig_92.g28249 Utricularia gibba HOM05D005626 ORTHO05D007372 5.4e-73 280.0 469 48.0
Lalb_Chr08g0240121 Lupinus albus HOM05D005626 ORTHO05D007372 7.0e-73 279.6 574 49.5
Eucgr.A01448 Eucalyptus grandis HOM05D005626 ORTHO05D007372 9.1e-73 279.3 509 46.6
CARHR266100 Cardamine hirsuta HOM05D005626 ORTHO05D007372 3.5e-72 277.3 520 55.6
Thhalv10013148m.g Eutrema salsugineum HOM05D005626 ORTHO05D007372 3.5e-72 277.3 530 55.1
arahy.Tifrunner.gnm1.ann1.1DU7LF Arachis hypogaea HOM05D005626 ORTHO05D007372 2.3e-71 274.6 535 42.2
Sabra15G0008900 Salix brachista HOM05D005626 ORTHO05D007372 2.3e-71 274.6 435 52.2
Sc25g0000940 Simmondsia chinensis HOM05D005626 ORTHO05D007372 2.3e-71 274.6 409 62.3
BcaB05g22010 Brassica carinata HOM05D005626 ORTHO05D007372 2.9e-71 274.2 534 43.3
Lsat_1_v5_gn_9_49841 Lactuca sativa HOM05D005626 ORTHO05D007372 9.5e-70 269.2 575 49.6
Lj8A623T21 Lonicera japonica HOM05D005626 ORTHO05D007372 2.3e-68 264.6 350 58.3
Manes.06G012101 Manihot esculenta HOM05D005626 ORTHO05D007372 2.3e-68 264.6 300 63.3
Aqoxy5G04311 Aquilegia oxysepala HOM05D005626 ORTHO05D007372 3.0e-68 264.2 524 52.9
BolC2t08014H Brassica oleracea HOM05D005626 ORTHO05D007372 8.9e-68 262.7 528 54.2
CSS0000100 Camellia sinensis var. sinensis HOM05D005626 ORTHO05D007372 8.9e-68 262.7 536 36.9
HanXRQChr15g0485681 Helianthus annuus HOM05D005626 ORTHO05D007372 9.8e-67 259.2 435 50.1
C02p18690 Brassica napus HOM05D005626 ORTHO05D007372 3.7e-66 257.3 529 53.5
ATR0730G125 Amborella trichopoda HOM05D005626 ORTHO05D007372 3.2e-65 254.2 349 55.6
MSTRG.27018 Avicennia marina HOM05D005626 ORTHO05D007372 7.0e-65 253.1 439 54.7
A02p11310 Brassica napus HOM05D005626 ORTHO05D007372 7.8e-64 249.6 526 53.4
PSO063G0511 Papaver somniferum HOM05D005626 ORTHO05D007372 7.8e-64 249.6 514 44.2
BraA02t06193Z Brassica rapa HOM05D005626 ORTHO05D007372 1.0e-63 249.2 514 54.3
BcaC03g14458 Brassica carinata HOM05D005626 ORTHO05D007372 1.7e-63 248.4 514 54.3
PSO170G4344 Papaver somniferum HOM05D005626 ORTHO05D007372 1.1e-62 245.7 417 50.6
MBI07_g43862_MAGBIO Magnolia biondii HOM05D005626 ORTHO05D007372 7.3e-62 243.0 450 37.3
SGA_v2.0_scaffold192G40528 Striga asiatica HOM05D005626 ORTHO05D007032 2.3e-60 238.0 405 46.4
MELO3C005892.2 Cucumis melo HOM05D005626 ORTHO05D007372 3.1e-60 237.7 433 48.5
SalBow4G1489 Salvia bowleyana HOM05D005626 ORTHO05D007372 3.4e-59 234.2 539 34.3
ECA232G0910 Erigeron canadensis HOM05D005626 ORTHO05D007372 2.9e-58 231.1 453 56.7
Manes.06G011750 Manihot esculenta HOM05D005626 ORTHO05D007372 9.5e-54 216.1 228 70.2
BcaB05g22007 Brassica carinata HOM05D005626 ORTHO05D007372 2.1e-53 214.9 525 47.8
DCAR_010593 Daucus carota HOM05D005626 ORTHO05D007372 9.8e-51 206.1 259 47.5
Mapoly0045s0029 Marchantia polymorpha HOM05D005626 ORTHO05D007372 6.4e-42 176.8 352 45.5
MBI19_g14786_MAGBIO Magnolia biondii HOM05D005626 ORTHO05D007372 8.3e-42 176.4 139 62.6
Glyma.06G130333 Glycine max HOM05D005626 ORTHO05D007372 1.7e-39 168.7 128 65.6
Mapoly0001s0084 Marchantia polymorpha HOM05D005626 ORTHO05D007372 1.3e-29 136.0 351 34.2
MBI19_g14787_MAGBIO Magnolia biondii HOM05D005626 ORTHO05D007372 2.1e-29 135.2 121 58.7
Pp3c5_16230 Physcomitrium patens HOM05D005626 ORTHO05D007372 1.1e-28 132.9 352 28.1
BcaB01g04215 Brassica carinata HOM05D005626 ORTHO05D007372 4.4e-27 127.5 156 45.5
Lj1A1021T50 Lonicera japonica HOM05D005626 ORTHO05D007372 3.5e-24 117.9 162 43.8
CSS0006573 Camellia sinensis var. sinensis HOM05D005626 ORTHO05D007372 7.3e-22 110.2 85 65.9
Pp3c16_9300 Physcomitrium patens HOM05D005626 ORTHO05D007372 1.1e-20 106.3 362 24.3
PGSC0003DMG400018528 Solanum tuberosum HOM05D005626 ORTHO05D007372 1.1e-20 106.3 180 40.6
Lj1A1021T49 Lonicera japonica HOM05D005626 ORTHO05D007372 1.5e-19 102.4 286 36.0
Pp3c5_16240 Physcomitrium patens HOM05D005626 ORTHO05D007372 3.2e-17 94.7 142 37.3
QL09p008114 Quercus lobata HOM05D005626 ORTHO05D007372 9.3e-17 93.2 98 57.1
AagrBONN_evm.TU.Sc2ySwM_369.443 Anthoceros agrestis HOM05D005626 ORTHO05D007372 1.2e-16 92.8 139 38.8
SEGI_36936 Sequoiadendron giganteum HOM05D005626 ORTHO05D007372 2.1e-16 92.0 188 30.9
Actinidia06140 Actinidia chinensis HOM05D005626 ORTHO05D007372 5.6e-14 84.0 60 68.3
MD07G1293500 Malus domestica HOM05D005626 ORTHO05D007372 3.7e-13 81.3 54 70.4
Pp3c8_12740 Physcomitrium patens HOM05D005626 ORTHO05D007372 8.1e-13 80.1 141 31.9
Cfa019813 Carpinus fangiana HOM05D005626 ORTHO05D007372 1.1e-12 79.7 47 85.1
Pp3c23_14930 Physcomitrium patens HOM05D005626 ORTHO05D007372 6.9e-12 77.0 139 32.4


User provided reference genes

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