Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr16g0532681 Helianthus annuus HOM05D006560 ORTHO05D008164 4.7e-294 1013.8 532 100.0
ECA246G0244 Erigeron canadensis HOM05D006560 ORTHO05D008164 3.6e-193 678.7 540 69.1
Lsat_1_v5_gn_3_69681 Lactuca sativa HOM05D006560 ORTHO05D008164 1.5e-178 630.2 518 66.0
Cc07_g12560 Coffea canephora HOM05D006560 ORTHO05D008164 1.3e-139 500.7 567 50.4
CAN.G809.82 Capsicum annuum HOM05D006560 ORTHO05D008164 1.0e-134 484.6 572 49.1
TAR629G1839 Trochodendron aralioides HOM05D006560 ORTHO05D008164 1.5e-130 470.7 530 49.8
Solyc02g081520.3 Solanum lycopersicum HOM05D006560 ORTHO05D008164 7.4e-130 468.4 544 49.8
Manes.01G126500 Manihot esculenta HOM05D006560 ORTHO05D008164 1.3e-129 467.6 536 49.4
Actinidia22879 Actinidia chinensis HOM05D006560 ORTHO05D008164 3.7e-129 466.1 546 48.9
GSVIVG01033201001 Vitis vinifera HOM05D006560 ORTHO05D008164 1.8e-128 463.8 604 45.2
QL02p055474 Quercus lobata HOM05D006560 ORTHO05D008164 4.5e-127 459.1 535 47.7
MSTRG.3663 Avicennia marina HOM05D006560 ORTHO05D008164 2.2e-126 456.8 576 47.0
DCAR_014134 Daucus carota HOM05D006560 ORTHO05D008164 8.4e-126 454.9 570 47.7
Migut.K01188 Erythranthe guttata HOM05D006560 ORTHO05D008164 3.2e-125 453.0 576 47.2
CiPaw.04G006800 Carya illinoinensis HOM05D006560 ORTHO05D008164 9.3e-125 451.4 535 47.1
Hma1.2p1_0085F.1_g043920 Hydrangea macrophylla HOM05D006560 ORTHO05D008164 8.7e-123 444.9 526 50.0
Prupe.8G267600 Prunus persica HOM05D006560 ORTHO05D008164 3.3e-122 443.0 534 46.8
Medtr5g076180 Medicago truncatula HOM05D006560 ORTHO05D008164 5.7e-122 442.2 575 47.0
MD09G1187400 Malus domestica HOM05D006560 ORTHO05D008164 2.2e-121 440.3 535 48.0
TWI77G0885 Tripterygium wilfordii HOM05D006560 ORTHO05D008164 2.2e-121 440.3 541 49.5
Nitab4.5_0000108g0060 Nicotiana tabacum HOM05D006560 ORTHO05D008164 4.8e-121 439.1 528 48.5
PSO063G7212 Papaver somniferum HOM05D006560 ORTHO05D008164 6.3e-121 438.7 536 45.9
PSO782G5584 Papaver somniferum HOM05D006560 ORTHO05D008164 8.2e-121 438.3 536 45.7
Psat2g048560 Pisum sativum HOM05D006560 ORTHO05D008164 1.4e-120 437.6 563 46.7
CANSAT64G2566 Cannabis sativa HOM05D006560 ORTHO05D008164 2.4e-120 436.8 566 44.0
Potri.015G148300 Populus trichocarpa HOM05D006560 ORTHO05D008164 1.5e-119 434.1 538 47.0
VMungo0647G2139 Vigna mungo HOM05D006560 ORTHO05D008164 7.7e-119 431.8 549 46.6
Atru.chr1.2184 Acer truncatum HOM05D006560 ORTHO05D008164 1.0e-118 431.4 537 47.5
arahy.Tifrunner.gnm1.ann1.RNL3QM Arachis hypogaea HOM05D006560 ORTHO05D008164 2.2e-118 430.3 559 45.6
Cfa008016 Carpinus fangiana HOM05D006560 ORTHO05D008164 2.2e-118 430.3 533 47.3
SalBow5G2177 Salvia bowleyana HOM05D006560 ORTHO05D008164 6.5e-118 428.7 587 44.3
Lalb_Chr17g0345771 Lupinus albus HOM05D006560 ORTHO05D008164 1.9e-117 427.2 559 45.1
SGA_v2.0_scaffold45G17096 Striga asiatica HOM05D006560 ORTHO05D008164 5.5e-117 425.6 580 43.6
Phvul.008G242800 Phaseolus vulgaris HOM05D006560 ORTHO05D008164 9.4e-117 424.9 547 45.7
arahy.Tifrunner.gnm1.ann1.N6ISZX Arachis hypogaea HOM05D006560 ORTHO05D008164 1.2e-116 424.5 556 45.1
PGR102G0946 Punica granatum HOM05D006560 ORTHO05D008164 1.2e-116 424.5 528 46.6
RcHm_v2.0_Chr7g0242051 Rosa chinensis HOM05D006560 ORTHO05D008164 2.7e-116 423.3 538 45.4
Glyma.14G208100 Glycine max HOM05D006560 ORTHO05D008164 3.6e-116 422.9 533 47.1
Aqoxy3G04298 Aquilegia oxysepala HOM05D006560 ORTHO05D008164 7.9e-116 421.8 549 44.8
TPR.G15397 Trifolium pratense HOM05D006560 ORTHO05D008164 1.8e-115 420.6 559 46.0
vmacro20436 Vaccinium macrocarpon HOM05D006560 ORTHO05D008164 3.9e-115 419.5 517 49.1
FvH4_5g39750 Fragaria vesca HOM05D006560 ORTHO05D008164 8.8e-115 418.3 540 45.7
Duzib138G1900 Durio zibethinus HOM05D006560 ORTHO05D008164 1.5e-114 417.5 537 44.3
Ca_05740_v3 Cicer arietinum L. HOM05D006560 ORTHO05D008164 1.3e-113 414.5 554 45.8
Thecc.04G055900 Theobroma cacao HOM05D006560 ORTHO05D008164 1.3e-113 414.5 549 43.5
Eucgr.B03794 Eucalyptus grandis HOM05D006560 ORTHO05D008164 2.8e-113 413.3 571 44.1
Haze_14043 Corylus avellana HOM05D006560 ORTHO05D008164 1.1e-112 411.4 572 44.1
QL02p056517 Quercus lobata HOM05D006560 ORTHO05D008164 1.4e-112 411.0 700 38.3
LjContig00141g0007295 Lotus japonicus HOM05D006560 ORTHO05D008164 1.7e-110 404.1 558 44.8
Lj4A249G52 Lonicera japonica HOM05D006560 ORTHO05D008164 2.2e-110 403.7 459 49.7
PGSC0003DMG400017739 Solanum tuberosum HOM05D006560 ORTHO05D008164 6.1e-108 395.6 574 43.9
Gohir.A12G053000 Gossypium hirsutum HOM05D006560 ORTHO05D008164 7.9e-108 395.2 526 43.9
Gorai.008G054800 Gossypium raimondii HOM05D006560 ORTHO05D008164 1.8e-107 394.0 529 43.1
Nitab4.5_0003580g0010 Nicotiana tabacum HOM05D006560 ORTHO05D008164 2.3e-107 393.7 489 47.2
Rhsim10G0187300 Rhododendron simsii HOM05D006560 ORTHO05D008164 4.4e-106 389.4 652 41.0
COL.COLO4_13435 Corchorus olitorius HOM05D006560 ORTHO05D008164 9.7e-106 388.3 558 41.9
Gohir.D12G051500 Gossypium hirsutum HOM05D006560 ORTHO05D008164 1.7e-105 387.5 531 42.6
Sabra16G0321300 Salix brachista HOM05D006560 ORTHO05D008164 1.6e-103 380.9 585 40.9
Sp3g01710 Schrenkiella parvula HOM05D006560 ORTHO05D008164 2.0e-103 380.6 543 40.9
Sabra16G0322200 Salix brachista HOM05D006560 ORTHO05D008164 7.7e-103 378.6 560 42.5
Hund12951 Selenicereus undatus HOM05D006560 ORTHO05D008164 5.0e-102 375.9 527 43.1
Aa31LG5G13150 Aethionema arabicum HOM05D006560 ORTHO05D008164 2.5e-101 373.6 540 40.2
MELO3C020249.2 Cucumis melo HOM05D006560 ORTHO05D008164 5.5e-101 372.5 542 41.9
A05p44410 Brassica napus HOM05D006560 ORTHO05D008164 7.2e-101 372.1 542 40.8
Sed0010007 Sechium edule HOM05D006560 ORTHO05D008164 9.4e-101 371.7 537 41.3
CsaV3_3G021130 Cucumis sativus L. HOM05D006560 ORTHO05D008164 1.2e-100 371.3 540 40.9
ClCG05G011330 Citrullus lanatus HOM05D006560 ORTHO05D008164 2.1e-100 370.5 541 40.7
AL3G12070 Arabidopsis lyrata HOM05D006560 ORTHO05D008164 6.1e-100 369.0 541 39.9
AUR62038458 Chenopodium quinoa HOM05D006560 ORTHO05D008164 6.7e-99 365.5 533 43.0
EL10Ac6g14054 Beta vulgaris HOM05D006560 ORTHO05D008164 8.8e-99 365.2 529 43.5
Sabra15G0156900 Salix brachista HOM05D006560 ORTHO05D008164 2.8e-97 360.1 545 41.8
CARHR076680 Cardamine hirsuta HOM05D006560 ORTHO05D008164 4.1e-96 356.3 545 38.0
Dinv28275 Davidia involucrata HOM05D006560 ORTHO05D008164 2.0e-95 354.0 483 43.5
AUR62014236 Chenopodium quinoa HOM05D006560 ORTHO05D008164 5.0e-94 349.4 503 42.5
Ah.14g086100 Amaranthus hybridus HOM05D006560 ORTHO05D008164 6.5e-94 349.0 553 39.4
BcaC05g30516 Brassica carinata HOM05D006560 ORTHO05D008164 3.0e-91 340.1 540 39.3
Sc09g0004640 Simmondsia chinensis HOM05D006560 ORTHO05D008164 6.8e-91 339.0 497 41.6
Thhalv10020468m.g Eutrema salsugineum HOM05D006560 ORTHO05D008164 1.2e-90 338.2 549 37.5
BolC5t35073H Brassica oleracea HOM05D006560 ORTHO05D008164 9.8e-90 335.1 540 39.1
BraA06t23296Z Brassica rapa HOM05D006560 ORTHO05D008164 9.8e-90 335.1 537 38.2
Carub.0003s0178 Capsella rubella HOM05D006560 ORTHO05D008164 5.4e-88 329.3 549 37.0
AT3G02680 Arabidopsis thaliana HOM05D006560 ORTHO05D008164 7.0e-88 328.9 546 37.4
Os10g0487300 Oryza sativa ssp. japonica HOM05D006560 ORTHO05D008164 7.0e-88 328.9 553 37.6
C09p75830 Brassica napus HOM05D006560 ORTHO05D008164 1.2e-87 328.2 517 39.5
HPP92_015158 Vanilla planifolia HOM05D006560 ORTHO05D008164 5.2e-83 312.8 545 37.8
MBI03_g13822_MAGBIO Magnolia biondii HOM05D006560 ORTHO05D008164 1.5e-82 311.2 470 40.9
Glyma.02G239200 Glycine max HOM05D006560 ORTHO05D008164 5.7e-82 309.3 457 43.8
ATR0618G008 Amborella trichopoda HOM05D006560 ORTHO05D008164 1.7e-78 297.7 480 37.7
BcaC05g30567 Brassica carinata HOM05D006560 ORTHO05D008164 8.6e-78 295.4 334 43.7
Zm00001eb221260 Zea mays HOM05D006560 ORTHO05D008164 1.8e-75 287.7 555 35.3
SHI09016 Sapria himalayana HOM05D006560 ORTHO05D008164 5.0e-70 269.6 469 35.8
Peaxi162Scf00344g01815 Petunia axillaris HOM05D006560 ORTHO05D008164 1.2e-68 265.0 468 39.3
SEGI_37812 Sequoiadendron giganteum HOM05D006560 ORTHO05D008164 3.6e-68 263.5 573 34.0
Ciclev10012792m.g Citrus clementina HOM05D006560 ORTHO05D008164 5.2e-67 259.6 208 57.2
Migut.L00953 Erythranthe guttata HOM05D006560 ORTHO05D008164 6.8e-67 259.2 430 40.2
Hma1.2p1_0085F.1_g043970 Hydrangea macrophylla HOM05D006560 ORTHO05D008164 4.4e-66 256.5 409 42.1
Migut.L00936 Erythranthe guttata HOM05D006560 ORTHO05D008164 8.3e-65 252.3 417 39.3
Oeu060825.3 Olea europaea HOM05D006560 ORTHO05D008164 7.0e-64 249.2 480 37.1
Cpa.g.sc108.22 Carica papaya HOM05D006560 ORTHO05D008164 5.6e-61 239.6 396 38.6
Nn3g18627 Nelumbo nucifera HOM05D006560 ORTHO05D008164 1.1e-56 225.3 192 55.7
unitig_748.g7016 Utricularia gibba HOM05D006560 ORTHO05D008164 1.1e-56 225.3 511 34.8
CSS0021055 Camellia sinensis var. sinensis HOM05D000185 ORTHO05D000105 1.7e-54 218.0 211 54.5
CDE04G3361 Ceratophyllum demersum HOM05D006560 ORTHO05D008164 4.0e-51 206.8 390 34.6
Hma1.2p1_0085F.1_g043960 Hydrangea macrophylla HOM05D006560 ORTHO05D008164 3.4e-50 203.8 154 64.3
Hma1.2p1_0085F.1_g043925 Hydrangea macrophylla HOM05D006560 ORTHO05D008164 1.7e-49 201.4 128 72.7
Sopen02g026150 Solanum pennellii HOM05D006560 ORTHO05D008164 7.1e-48 196.1 357 41.5
Migut.L00937 Erythranthe guttata HOM05D006560 ORTHO05D008164 1.8e-43 181.4 119 71.4
FAN08G2099 Fragaria x ananassa HOM05D006560 ORTHO05D008164 2.7e-39 167.5 137 60.6
SMO169G0207 Selaginella moellendorffii HOM05D006560 ORTHO05D008164 5.1e-38 163.3 568 28.0
Pp3c4_14090 Physcomitrium patens HOM05D006560 ORTHO05D008164 5.1e-30 136.7 354 28.5
TPR.G36125 Trifolium pratense HOM05D006560 ORTHO05D008164 1.5e-29 135.2 117 59.8
Migut.L00946 Erythranthe guttata HOM05D006560 ORTHO05D008164 2.9e-25 120.9 146 43.8
Ciclev10013450m.g Citrus clementina HOM05D006560 ORTHO05D008164 9.3e-24 115.9 318 33.6
CSS0034206 Camellia sinensis var. sinensis HOM05D006560 ORTHO05D008164 3.1e-19 100.9 210 38.1
CBR_g29321 Chara braunii HOM05D006560 ORTHO05D008164 2.6e-18 97.8 192 33.9
Migut.L00945 Erythranthe guttata HOM05D006560 ORTHO05D008164 6.7e-14 83.2 65 63.1
Ciclev10013286m.g Citrus clementina HOM05D006560 ORTHO05D008164 2.5e-08 64.7 59 50.8
Dinv24123 Davidia involucrata HOM05D006560 ORTHO05D008164 7.9e-07 59.7 30 80.0
FAN18G2665 Fragaria x ananassa HOM05D006560 ORTHO05D008164 1.0e-06 59.3 69 43.5
Nn3g18626 Nelumbo nucifera HOM05D006560 ORTHO05D008164 1.8e-06 58.5 76 46.1


User provided reference genes

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