Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr16g0519711 Helianthus annuus HOM05D001670 ORTHO05D002980 3.8e-128 461.5 223 100.0
CAN.G899.12 Capsicum annuum HOM05D001670 ORTHO05D002980 9.2e-66 254.2 220 57.7
Sopen01g036510 Solanum pennellii HOM05D001670 ORTHO05D002980 5.9e-65 251.5 220 57.3
SGA_v2.0_scaffold399G50813 Striga asiatica HOM05D001670 ORTHO05D002980 1.0e-64 250.8 220 57.7
ECA236G0609 Erigeron canadensis HOM05D001670 ORTHO05D002980 1.7e-64 250.0 222 56.8
Oeu000038.3 Olea europaea HOM05D001670 ORTHO05D002980 1.7e-64 250.0 220 57.3
SGA_v2.0_scaffold153G36957 Striga asiatica HOM05D001670 ORTHO05D002980 2.3e-64 249.6 220 56.8
MSTRG.20721 Avicennia marina HOM05D001670 ORTHO05D002980 3.0e-64 249.2 218 56.4
Solyc01g090780.3 Solanum lycopersicum HOM05D001670 ORTHO05D002980 3.0e-64 249.2 220 56.8
SalBow5G2000 Salvia bowleyana HOM05D001670 ORTHO05D002980 5.0e-64 248.4 212 59.0
CSS0045110 Camellia sinensis var. sinensis HOM05D001670 ORTHO05D002980 1.9e-63 246.5 212 56.6
Migut.B01578 Erythranthe guttata HOM05D001670 ORTHO05D002980 4.3e-63 245.4 220 55.0
Cc02_g24610 Coffea canephora HOM05D001670 ORTHO05D002980 7.3e-63 244.6 220 55.9
HanXRQChr04g0123421 Helianthus annuus HOM05D001670 ORTHO05D002980 7.3e-63 244.6 222 55.9
Lsat_1_v5_gn_7_10221 Lactuca sativa HOM05D001670 ORTHO05D002980 7.3e-63 244.6 217 56.2
Oeu064576.1 Olea europaea HOM05D001670 ORTHO05D002980 7.3e-63 244.6 218 56.9
Lsat_1_v5_gn_4_44320 Lactuca sativa HOM05D001670 ORTHO05D002980 2.1e-62 243.0 213 54.5
Eucgr.E01609 Eucalyptus grandis HOM05D001670 ORTHO05D002980 1.0e-61 240.7 212 53.8
THA.LOC104814077 Tarenaya hassleriana HOM05D001670 ORTHO05D002980 1.8e-61 240.0 217 53.9
Nitab4.5_0000706g0120 Nicotiana tabacum HOM05D001670 ORTHO05D002980 2.3e-61 239.6 233 54.1
THA.LOC104801485 Tarenaya hassleriana HOM05D001670 ORTHO05D002980 2.3e-61 239.6 217 54.4
Cpa.g.sc587.1 Carica papaya HOM05D001670 ORTHO05D002980 3.1e-61 239.2 221 53.4
Rhsim01G0135600 Rhododendron simsii HOM05D001670 ORTHO05D002980 3.1e-61 239.2 212 55.2
Gorai.008G107100 Gossypium raimondii HOM05D001670 ORTHO05D002980 5.2e-61 238.4 217 53.0
HanXRQChr06g0168951 Helianthus annuus HOM05D001670 ORTHO05D002980 5.2e-61 238.4 222 54.5
GSVIVG01018178001 Vitis vinifera HOM05D001670 ORTHO05D002980 5.2e-61 238.4 222 52.3
Nitab4.5_0002304g0030 Nicotiana tabacum HOM05D001670 ORTHO05D002980 8.9e-61 237.7 220 56.4
Gohir.D12G098300 Gossypium hirsutum HOM05D001670 ORTHO05D002980 1.2e-60 237.3 217 52.5
Gohir.A12G095700 Gossypium hirsutum HOM05D001670 ORTHO05D002980 1.5e-60 236.9 217 52.5
COL.COLO4_12469 Corchorus olitorius HOM05D001670 ORTHO05D002980 2.0e-60 236.5 219 53.0
Duzib133G0195 Durio zibethinus HOM05D001670 ORTHO05D002980 2.0e-60 236.5 217 52.5
CANSAT21G0618 Cannabis sativa HOM05D001670 ORTHO05D002980 1.3e-59 233.8 217 53.0
Atru.chr5.219 Acer truncatum HOM05D001670 ORTHO05D002980 1.7e-59 233.4 212 54.2
PGR042G0136 Punica granatum HOM05D001670 ORTHO05D002980 1.7e-59 233.4 217 50.2
Thecc.01G385600 Theobroma cacao HOM05D001670 ORTHO05D002980 2.2e-59 233.0 217 52.5
FAN03G2300 Fragaria x ananassa HOM05D001670 ORTHO05D002980 2.9e-59 232.6 217 53.9
Duzib268G0141 Durio zibethinus HOM05D001670 ORTHO05D002980 3.7e-59 232.3 217 52.5
FvH4_7g10770 Fragaria vesca HOM05D001670 ORTHO05D002980 3.7e-59 232.3 217 53.9
Gorai.007G088100 Gossypium raimondii HOM05D001670 ORTHO05D002980 3.7e-59 232.3 217 53.0
CARHR000250 Cardamine hirsuta HOM05D001670 ORTHO05D002980 4.9e-59 231.9 217 50.7
Gohir.D11G082333 Gossypium hirsutum HOM05D001670 ORTHO05D002980 4.9e-59 231.9 217 52.5
QL04p035871 Quercus lobata HOM05D001670 ORTHO05D002980 4.9e-59 231.9 221 52.5
AL1G10200 Arabidopsis lyrata HOM05D001670 ORTHO05D002980 6.4e-59 231.5 217 51.2
Hund27384 Selenicereus undatus HOM05D001670 ORTHO05D002980 6.4e-59 231.5 221 52.0
TWI14G1227 Tripterygium wilfordii HOM05D001670 ORTHO05D002980 6.4e-59 231.5 217 52.1
C06p20660 Brassica napus HOM05D001670 ORTHO05D002980 8.3e-59 231.1 217 49.8
BolC6t37249H Brassica oleracea HOM05D001670 ORTHO05D002980 8.3e-59 231.1 217 49.8
FAN10G0390 Fragaria x ananassa HOM05D001670 ORTHO05D002980 8.3e-59 231.1 217 53.5
FAN10G2564 Fragaria x ananassa HOM05D001670 ORTHO05D002980 8.3e-59 231.1 217 53.5
Gohir.A11G078000 Gossypium hirsutum HOM05D001670 ORTHO05D002980 8.3e-59 231.1 217 52.5
Lj7C538T12 Lonicera japonica HOM05D001670 ORTHO05D002980 8.3e-59 231.1 216 52.8
Carub.0001s0015 Capsella rubella HOM05D001670 ORTHO05D002980 1.1e-58 230.7 217 51.2
FAN01G0667 Fragaria x ananassa HOM05D001670 ORTHO05D002980 1.1e-58 230.7 217 53.0
RcHm_v2.0_Chr1g0348711 Rosa chinensis HOM05D001670 ORTHO05D002980 1.1e-58 230.7 217 53.9
BcaC07g42342 Brassica carinata HOM05D001670 ORTHO05D002980 1.9e-58 229.9 217 51.2
Ciclev10018430m.g Citrus clementina HOM05D001670 ORTHO05D002980 1.9e-58 229.9 217 51.6
TWI59G0301 Tripterygium wilfordii HOM05D001670 ORTHO05D002980 1.9e-58 229.9 217 51.2
Sp1g00220 Schrenkiella parvula HOM05D001670 ORTHO05D002980 2.4e-58 229.6 217 50.7
FAN06G0311 Fragaria x ananassa HOM05D001670 ORTHO05D002980 3.2e-58 229.2 217 53.5
CiPaw.14G024400 Carya illinoinensis HOM05D001670 ORTHO05D002980 4.1e-58 228.8 217 52.1
AUR62013711 Chenopodium quinoa HOM05D001670 ORTHO05D002980 4.1e-58 228.8 221 52.0
Glyma.03G118400 Glycine max HOM05D001670 ORTHO05D002980 4.1e-58 228.8 221 52.5
BcaC08g44594 Brassica carinata HOM05D001670 ORTHO05D002980 5.4e-58 228.4 217 49.3
A07p21180 Brassica napus HOM05D001670 ORTHO05D002980 5.4e-58 228.4 217 49.3
BraA07t29805Z Brassica rapa HOM05D001670 ORTHO05D002980 5.4e-58 228.4 217 49.3
BcaB02g07859 Brassica carinata HOM05D001670 ORTHO05D002980 7.0e-58 228.0 217 50.7
AUR62004150 Chenopodium quinoa HOM05D001670 ORTHO05D002980 9.2e-58 227.6 221 52.0
Thhalv10006521m.g Eutrema salsugineum HOM05D001670 ORTHO05D002980 9.2e-58 227.6 217 50.7
AT1G02080 Arabidopsis thaliana HOM05D001670 ORTHO05D002980 2.0e-57 226.5 217 50.2
A10p00140 Brassica napus HOM05D001670 ORTHO05D002980 2.0e-57 226.5 217 50.7
C05p00130 Brassica napus HOM05D001670 ORTHO05D002980 2.0e-57 226.5 217 50.7
BraA10t42293Z Brassica rapa HOM05D001670 ORTHO05D002980 2.0e-57 226.5 217 50.7
Manes.05G050200 Manihot esculenta HOM05D001670 ORTHO05D002980 2.7e-57 226.1 217 52.5
BcaB03g13629 Brassica carinata HOM05D001670 ORTHO05D002980 3.5e-57 225.7 217 50.2
BraA09t42277Z Brassica rapa HOM05D001670 ORTHO05D002980 3.5e-57 225.7 217 50.7
MELO3C005963.2 Cucumis melo HOM05D001670 ORTHO05D002980 3.5e-57 225.7 212 51.9
CsaV3_3G007410 Cucumis sativus L. HOM05D001670 ORTHO05D002980 3.5e-57 225.7 212 51.9
C08p54070 Brassica napus HOM05D001670 ORTHO05D002980 4.6e-57 225.3 217 50.7
BolC8t52916H Brassica oleracea HOM05D001670 ORTHO05D002980 4.6e-57 225.3 217 50.7
Prupe.2G135900 Prunus persica HOM05D001670 ORTHO05D002980 4.6e-57 225.3 217 52.5
MD07G1112500 Malus domestica HOM05D001670 ORTHO05D002980 6.0e-57 224.9 217 52.5
VMungo0331G0876 Vigna mungo HOM05D001670 ORTHO05D002980 1.0e-56 224.2 221 51.6
CiPaw.13G031300 Carya illinoinensis HOM05D001670 ORTHO05D002980 1.3e-56 223.8 217 51.6
Phvul.010G056800 Phaseolus vulgaris HOM05D001670 ORTHO05D002980 1.3e-56 223.8 221 51.1
BcaNung05287 Brassica carinata HOM05D001670 ORTHO05D002980 2.3e-56 223.0 217 50.2
BolC5t28803H Brassica oleracea HOM05D001670 ORTHO05D002980 2.3e-56 223.0 217 50.2
FAN06G1683 Fragaria x ananassa HOM05D001670 ORTHO05D002980 2.3e-56 223.0 230 50.9
MD02G1214300 Malus domestica HOM05D001670 ORTHO05D002980 2.3e-56 223.0 212 53.3
Glyma.07G108700 Glycine max HOM05D001670 ORTHO05D002980 3.9e-56 222.2 221 51.1
Psat4g209400 Pisum sativum HOM05D001670 ORTHO05D002980 3.9e-56 222.2 217 51.6
Hma1.2p1_0341F.1_g130260 Hydrangea macrophylla HOM05D001670 ORTHO05D002980 5.0e-56 221.9 212 53.3
TAR375G0686 Trochodendron aralioides HOM05D001670 ORTHO05D002980 5.0e-56 221.9 212 51.9
Aa31LG1G11410 Aethionema arabicum HOM05D001670 ORTHO05D002980 6.6e-56 221.5 217 49.8
Medtr8g005820 Medicago truncatula HOM05D001670 ORTHO05D002980 8.6e-56 221.1 217 52.5
Nn6g33938 Nelumbo nucifera HOM05D001670 ORTHO05D002980 8.6e-56 221.1 212 50.5
HPP92_007431 Vanilla planifolia HOM05D001670 ORTHO05D002980 2.5e-55 219.5 221 49.3
Ah.05g173600 Amaranthus hybridus HOM05D001670 ORTHO05D002980 3.3e-55 219.2 220 49.1
Dinv06565 Davidia involucrata HOM05D001670 ORTHO05D002980 4.3e-55 218.8 212 50.0
Sed0002470 Sechium edule HOM05D001670 ORTHO05D002980 4.3e-55 218.8 212 50.0
arahy.Tifrunner.gnm1.ann1.1V1Y36 Arachis hypogaea HOM05D001670 ORTHO05D002980 7.3e-55 218.0 217 49.3
arahy.Tifrunner.gnm1.ann1.5NE8AH Arachis hypogaea HOM05D001670 ORTHO05D002980 7.3e-55 218.0 217 49.3
Ca_23116_v3 Cicer arietinum L. HOM05D001670 ORTHO05D002980 7.3e-55 218.0 217 51.2
Lalb_Chr13g0290371 Lupinus albus HOM05D001670 ORTHO05D002980 7.3e-55 218.0 222 50.5
TAR629G1646 Trochodendron aralioides HOM05D001670 ORTHO05D002980 7.3e-55 218.0 212 51.9
EL10Ac1g00822 Beta vulgaris HOM05D001670 ORTHO05D002980 9.5e-55 217.6 213 51.2
Lalb_Chr07g0195691 Lupinus albus HOM05D001670 ORTHO05D002980 9.5e-55 217.6 217 50.7
Manes.01G270100 Manihot esculenta HOM05D001670 ORTHO05D002980 9.5e-55 217.6 222 50.5
Os10g0556700 Oryza sativa ssp. japonica HOM05D001670 ORTHO05D002980 1.2e-54 217.2 217 48.8
Glyma.03G118200 Glycine max HOM05D001670 ORTHO05D002980 8.1e-54 214.5 217 50.7
PSO421G0693 Papaver somniferum HOM05D001670 ORTHO05D002980 1.1e-53 214.2 220 50.0
TPR.G28734 Trifolium pratense HOM05D001670 ORTHO05D002980 1.1e-53 214.2 217 50.2
PSO104G0201 Papaver somniferum HOM05D001670 ORTHO05D002980 1.8e-53 213.4 220 50.0
Atru.chr1.760 Acer truncatum HOM05D001670 ORTHO05D002980 3.1e-53 212.6 212 50.5
GSVIVG01000874001 Vitis vinifera HOM05D001670 ORTHO05D002980 4.0e-53 212.2 212 49.5
Lj3g0005567 Lotus japonicus HOM05D001670 ORTHO05D002980 6.8e-53 211.5 217 49.3
Potri.002G143000 Populus trichocarpa HOM05D001670 ORTHO05D002980 1.5e-52 210.3 218 47.7
ECA234G0500 Erigeron canadensis HOM05D001670 ORTHO05D002980 2.0e-52 209.9 221 50.2
Zm00001eb404410 Zea mays HOM05D001670 ORTHO05D002980 2.6e-52 209.5 220 48.2
C09p00060 Brassica napus HOM05D001670 ORTHO05D002980 4.4e-52 208.8 212 46.7
BraA09t35680Z Brassica rapa HOM05D001670 ORTHO05D002980 4.4e-52 208.8 212 46.7
PSO170G5961 Papaver somniferum HOM05D001670 ORTHO05D002980 4.4e-52 208.8 221 48.9
Potri.014G058800 Populus trichocarpa HOM05D001670 ORTHO05D002980 4.4e-52 208.8 217 48.8
Lj9C563G7 Lonicera japonica HOM05D001670 ORTHO05D002980 5.8e-52 208.4 191 54.5
Zm00001eb000340 Zea mays HOM05D001670 ORTHO05D002980 1.3e-51 207.2 220 48.6
PSO017G3667 Papaver somniferum HOM05D001670 ORTHO05D002980 4.9e-51 205.3 221 48.0
ATR0317G075 Amborella trichopoda HOM05D001670 ORTHO05D002980 6.4e-51 204.9 216 46.3
Rhsim03G0166300 Rhododendron simsii HOM05D001670 ORTHO05D002980 1.9e-50 203.4 219 45.7
Mapoly0037s0011 Marchantia polymorpha HOM05D001670 ORTHO05D002980 4.1e-50 202.2 212 47.2
CBR_g37673 Chara braunii HOM05D001670 ORTHO05D002980 7.1e-50 201.4 219 46.6
Aqoxy7G00778 Aquilegia oxysepala HOM05D001670 ORTHO05D002980 4.6e-49 198.7 216 47.7
Os03g0102366 Oryza sativa ssp. japonica HOM05D001670 ORTHO05D002980 1.0e-48 197.6 215 45.1
Pp3c21_18770 Physcomitrium patens HOM05D001670 ORTHO05D002980 1.0e-48 197.6 217 44.7
Aqoxy6G02523 Aquilegia oxysepala HOM05D001670 ORTHO05D002980 3.9e-48 195.7 216 47.2
Duzib068G1107 Durio zibethinus HOM05D001670 ORTHO05D002980 5.1e-48 195.3 212 47.2
Sabra02G0111500 Salix brachista HOM05D001670 ORTHO05D002980 1.5e-47 193.7 250 42.0
Pp3c5_6540 Physcomitrium patens HOM05D001670 ORTHO05D002980 5.6e-47 191.8 214 46.3
Thecc.03G154100 Theobroma cacao HOM05D001670 ORTHO05D002980 2.6e-44 183.0 212 44.8
MCO11G155 Micromonas commoda HOM05D001670 ORTHO05D002980 5.8e-44 181.8 212 42.9
Dinv44111 Davidia involucrata HOM05D001670 ORTHO05D002980 2.2e-43 179.9 244 42.6
SMO340G0305 Selaginella moellendorffii HOM05D001670 ORTHO05D002980 4.9e-43 178.7 215 43.3
Pp3c6_26730 Physcomitrium patens HOM05D001670 ORTHO05D002980 2.1e-41 173.3 212 42.5
CSS0049488 Camellia sinensis var. sinensis HOM05D001670 ORTHO05D002980 3.5e-41 172.6 232 40.9
Hund17061 Selenicereus undatus HOM05D001670 ORTHO05D002980 7.8e-41 171.4 234 40.2
vmacro21039 Vaccinium macrocarpon HOM05D001670 ORTHO05D002980 6.2e-38 161.8 212 44.3
Cfa011137 Carpinus fangiana HOM05D001670 ORTHO05D002980 8.1e-38 161.4 217 43.8
Oeu061519.1 Olea europaea HOM05D001670 ORTHO05D002980 1.2e-36 157.5 240 40.0
AagrBONN_evm.TU.Sc2ySwM_362.1757 Anthoceros agrestis HOM05D001670 ORTHO05D002980 3.4e-36 156.0 220 39.1
Gohir.D11G082400 Gossypium hirsutum HOM05D001670 ORTHO05D002980 1.3e-35 154.1 151 50.3
Peaxi162Scf00377g00038 Petunia axillaris HOM05D001670 ORTHO05D002980 1.3e-35 154.1 220 43.2
PRCOL_00002164 Prasinoderma coloniale HOM05D001670 ORTHO05D002980 2.4e-34 149.8 223 36.8
Cre14.g632950 Chlamydomonas reinhardtii HOM05D001670 ORTHO05D002980 2.1e-33 146.7 208 37.5
Haze_02720 Corylus avellana HOM05D001670 ORTHO05D002980 1.3e-30 137.5 217 40.1
Actinidia20637 Actinidia chinensis HOM05D001670 ORTHO05D010670 2.9e-27 126.3 125 49.6
Lj4P515T29 Lonicera japonica HOM05D001670 ORTHO05D010670 7.9e-25 118.2 96 53.1
Psat4g209440 Pisum sativum HOM05D001670 ORTHO05D002980 7.9e-25 118.2 95 53.7
DCAR_015867 Daucus carota HOM05D001670 ORTHO05D002980 1.8e-24 117.1 222 36.5
A09p69250 Brassica napus HOM05D001670 ORTHO05D002980 3.0e-24 116.3 95 52.6
CSS0024648 Camellia sinensis var. sinensis HOM05D001670 ORTHO05D002980 3.9e-24 115.9 95 53.7
SHI13576 Sapria himalayana HOM05D001670 ORTHO05D002980 1.9e-23 113.6 95 48.4
CSS0042972 Camellia sinensis var. sinensis HOM05D001670 ORTHO05D002980 2.8e-22 109.8 93 51.6
vmacro06812 Vaccinium macrocarpon HOM05D001670 ORTHO05D002980 3.6e-22 109.4 95 49.5
CSS0017442 Camellia sinensis var. sinensis HOM05D001670 ORTHO05D010670 6.9e-21 105.1 105 54.3
DCAR_025093 Daucus carota HOM05D001670 ORTHO05D002980 6.9e-21 105.1 116 53.4
Cfa026075 Carpinus fangiana HOM05D001670 ORTHO05D002980 4.5e-20 102.4 214 29.4
ClCG05G000260 Citrullus lanatus HOM05D001670 ORTHO05D002980 1.4e-18 97.4 120 44.2
Actinidia20640 Actinidia chinensis HOM05D001670 ORTHO05D002980 4.2e-18 95.9 74 55.4
Actinidia00132 Actinidia chinensis HOM05D001670 ORTHO05D010670 1.8e-16 90.5 76 51.3
CDE11G1219 Ceratophyllum demersum HOM05D001670 ORTHO05D002980 3.9e-16 89.4 213 29.6
Sc13g0006690 Simmondsia chinensis HOM05D001670 ORTHO05D002980 5.6e-15 85.5 88 50.0
MBI04_g09509_MAGBIO Magnolia biondii HOM05D001670 ORTHO05D002980 4.8e-14 82.4 191 28.8
MBI16_g16201_MAGBIO Magnolia biondii HOM05D001670 ORTHO05D010670 2.6e-12 76.6 179 29.1
Actinidia24999 Actinidia chinensis HOM05D001670 ORTHO05D002980 4.5e-12 75.9 104 40.4
Actinidia34078 Actinidia chinensis HOM05D000196 ORTHO05D000279 2.9e-11 73.2 96 39.6
MD07G1112800 Malus domestica HOM05D001670 ORTHO05D002980 1.6e-09 67.4 53 54.7
MBI15_g34611_MAGBIO Magnolia biondii HOM05D001670 ORTHO05D010670 4.6e-09 65.9 174 27.0
MBI08_g34222_MAGBIO Magnolia biondii HOM05D000942 ORTHO05D010670 6.0e-09 65.5 167 29.3
Lsat_1_v5_gn_5_84901 Lactuca sativa HOM05D001670 ORTHO05D010670 1.3e-08 64.3 101 38.6
Actinidia20645 Actinidia chinensis HOM05D001670 ORTHO05D010670 2.3e-08 63.5 81 46.9
Lj5A710T19 Lonicera japonica HOM05D001670 ORTHO05D015222 8.7e-08 61.6 76 47.4
vmacro08837 Vaccinium macrocarpon HOM05D001670 ORTHO05D002980 8.7e-08 61.6 57 45.6
MD07G1112700 Malus domestica HOM05D001670 ORTHO05D010670 9.6e-07 58.2 65 49.2
Actinidia32899 Actinidia chinensis HOM05D005596 ORTHO05D006994 4.8e-06 55.8 96 35.4


User provided reference genes

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