Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr16g0519691 Helianthus annuus HOM05D001670 ORTHO05D002980 1.5e-178 629.4 310 100.0
HanXRQChr04g0123421 Helianthus annuus HOM05D001670 ORTHO05D002980 3.5e-71 272.7 271 53.9
HanXRQChr06g0168951 Helianthus annuus HOM05D001670 ORTHO05D002980 3.8e-70 269.2 271 52.8
Lsat_1_v5_gn_7_10221 Lactuca sativa HOM05D001670 ORTHO05D002980 3.8e-70 269.2 271 52.4
ECA236G0609 Erigeron canadensis HOM05D001670 ORTHO05D002980 9.4e-69 264.6 271 52.8
Nitab4.5_0000706g0120 Nicotiana tabacum HOM05D001670 ORTHO05D002980 1.2e-68 264.2 272 51.8
Nitab4.5_0002304g0030 Nicotiana tabacum HOM05D001670 ORTHO05D002980 6.1e-68 261.9 271 51.3
CSS0045110 Camellia sinensis var. sinensis HOM05D001670 ORTHO05D002980 4.0e-67 259.2 270 51.5
Dinv44111 Davidia involucrata HOM05D001670 ORTHO05D002980 2.0e-66 256.9 290 48.3
Lj9C563G7 Lonicera japonica HOM05D001670 ORTHO05D002980 4.8e-65 252.3 296 45.9
Peaxi162Scf00377g00038 Petunia axillaris HOM05D001670 ORTHO05D002980 1.1e-64 251.1 271 49.1
CSS0023490 Camellia sinensis var. sinensis HOM05D001670 ORTHO05D002980 1.8e-64 250.4 285 48.8
CAN.G899.12 Capsicum annuum HOM05D001670 ORTHO05D002980 2.4e-64 250.0 271 49.4
Lj7C538G19 Lonicera japonica HOM05D001670 ORTHO05D002980 4.1e-64 249.2 274 48.5
Solyc01g090780.3 Solanum lycopersicum HOM05D001670 ORTHO05D002980 7.0e-64 248.4 272 48.5
Sopen01g036510 Solanum pennellii HOM05D001670 ORTHO05D002980 2.7e-63 246.5 272 48.5
Medtr8g005820 Medicago truncatula HOM05D001670 ORTHO05D002980 1.0e-62 244.6 271 45.0
Sc13g0006690 Simmondsia chinensis HOM05D001670 ORTHO05D002980 1.0e-62 244.6 271 45.4
CiPaw.14G024400 Carya illinoinensis HOM05D001670 ORTHO05D002980 1.7e-62 243.8 271 46.9
DCAR_015867 Daucus carota HOM05D001670 ORTHO05D002980 2.9e-62 243.0 271 48.3
Haze_02723 Corylus avellana HOM05D001670 ORTHO05D002980 3.8e-62 242.7 271 46.5
Sabra02G0111500 Salix brachista HOM05D001670 ORTHO05D002980 6.5e-62 241.9 272 46.3
COL.COLO4_12469 Corchorus olitorius HOM05D001670 ORTHO05D002980 8.6e-62 241.5 271 46.9
Ca_23116_v3 Cicer arietinum L. HOM05D001670 ORTHO05D002980 1.1e-61 241.1 271 45.0
Cfa011137 Carpinus fangiana HOM05D001670 ORTHO05D002980 1.9e-61 240.4 271 46.5
Potri.002G143000 Populus trichocarpa HOM05D001670 ORTHO05D002980 1.9e-61 240.4 271 45.4
Atru.chr5.219 Acer truncatum HOM05D001670 ORTHO05D002980 2.5e-61 240.0 271 47.2
FAN01G0667 Fragaria x ananassa HOM05D001670 ORTHO05D002980 2.5e-61 240.0 271 45.8
Prupe.2G135900 Prunus persica HOM05D001670 ORTHO05D002980 2.5e-61 240.0 271 46.1
vmacro21039 Vaccinium macrocarpon HOM05D001670 ORTHO05D002980 2.5e-61 240.0 275 45.8
Nn6g33938 Nelumbo nucifera HOM05D001670 ORTHO05D002980 3.3e-61 239.6 271 46.1
VMungo0331G0876 Vigna mungo HOM05D001670 ORTHO05D002980 3.3e-61 239.6 271 46.1
Lalb_Chr07g0195691 Lupinus albus HOM05D001670 ORTHO05D002980 4.2e-61 239.2 275 45.1
Cpa.g.sc914.1 Carica papaya HOM05D001670 ORTHO05D002980 1.6e-60 237.3 271 46.1
Cc02_g24610 Coffea canephora HOM05D001670 ORTHO05D002980 1.6e-60 237.3 271 46.9
Potri.014G058800 Populus trichocarpa HOM05D001670 ORTHO05D002980 1.6e-60 237.3 271 45.8
PGR042G0136 Punica granatum HOM05D001670 ORTHO05D002980 1.6e-60 237.3 271 45.4
Glyma.07G108700 Glycine max HOM05D001670 ORTHO05D002980 2.1e-60 236.9 271 45.4
Rhsim01G0135600 Rhododendron simsii HOM05D001670 ORTHO05D002980 2.8e-60 236.5 271 47.6
TPR.G28734 Trifolium pratense HOM05D001670 ORTHO05D002980 2.8e-60 236.5 271 45.0
Eucgr.E01609 Eucalyptus grandis HOM05D001670 ORTHO05D002980 3.6e-60 236.1 271 45.8
FvH4_7g10770 Fragaria vesca HOM05D001670 ORTHO05D002980 3.6e-60 236.1 271 45.4
FAN10G0390 Fragaria x ananassa HOM05D001670 ORTHO05D002980 6.1e-60 235.3 271 45.0
Oeu000038.3 Olea europaea HOM05D001670 ORTHO05D002980 6.1e-60 235.3 271 45.8
RcHm_v2.0_Chr1g0348711 Rosa chinensis HOM05D001670 ORTHO05D002980 6.1e-60 235.3 271 45.0
TAR374G0935 Trochodendron aralioides HOM05D001670 ORTHO05D002980 6.1e-60 235.3 271 45.4
arahy.Tifrunner.gnm1.ann1.1V1Y36 Arachis hypogaea HOM05D001670 ORTHO05D002980 1.0e-59 234.6 271 46.1
Duzib133G0195 Durio zibethinus HOM05D001670 ORTHO05D002980 1.0e-59 234.6 271 45.8
FAN06G0311 Fragaria x ananassa HOM05D001670 ORTHO05D002980 1.0e-59 234.6 271 45.0
FAN06G1683 Fragaria x ananassa HOM05D001670 ORTHO05D002980 1.0e-59 234.6 271 45.0
Lj3g0005567 Lotus japonicus HOM05D001670 ORTHO05D002980 1.0e-59 234.6 271 45.4
CiPaw.13G031300 Carya illinoinensis HOM05D001670 ORTHO05D002980 1.4e-59 234.2 271 45.4
SGA_v2.0_scaffold153G36957 Striga asiatica HOM05D001670 ORTHO05D002980 1.4e-59 234.2 274 46.0
Thecc.01G385600 Theobroma cacao HOM05D001670 ORTHO05D002980 1.4e-59 234.2 271 45.8
GSVIVG01018178001 Vitis vinifera HOM05D001670 ORTHO05D002980 1.4e-59 234.2 275 45.5
FAN03G2300 Fragaria x ananassa HOM05D001670 ORTHO05D002980 1.8e-59 233.8 271 45.0
Glyma.03G118400 Glycine max HOM05D001670 ORTHO05D002980 1.8e-59 233.8 271 45.8
Manes.05G050200 Manihot esculenta HOM05D001670 ORTHO05D002980 1.8e-59 233.8 271 45.4
MSTRG.20721 Avicennia marina HOM05D001670 ORTHO05D002980 2.3e-59 233.4 275 47.3
FAN10G2564 Fragaria x ananassa HOM05D001670 ORTHO05D002980 2.3e-59 233.4 271 44.6
Psat4g209400 Pisum sativum HOM05D001670 ORTHO05D002980 2.3e-59 233.4 271 43.9
Oeu064574.1 Olea europaea HOM05D001670 ORTHO05D002980 3.0e-59 233.0 276 44.2
PGSC0003DMG401000201 Solanum tuberosum HOM05D001670 ORTHO05D002980 4.0e-59 232.6 271 45.4
Actinidia12669 Actinidia chinensis HOM05D001670 ORTHO05D002980 5.2e-59 232.3 258 48.1
Lalb_Chr13g0290371 Lupinus albus HOM05D001670 ORTHO05D002980 5.2e-59 232.3 270 43.7
MD02G1214300 Malus domestica HOM05D001670 ORTHO05D002980 5.2e-59 232.3 271 46.1
arahy.Tifrunner.gnm1.ann1.5NE8AH Arachis hypogaea HOM05D001670 ORTHO05D002980 8.9e-59 231.5 271 45.8
MD07G1112500 Malus domestica HOM05D001670 ORTHO05D002980 1.2e-58 231.1 271 45.4
SGA_v2.0_scaffold399G50813 Striga asiatica HOM05D001670 ORTHO05D002980 1.2e-58 231.1 270 46.7
CANSAT21G0618 Cannabis sativa HOM05D001670 ORTHO05D002980 2.6e-58 229.9 267 46.1
QL04p035871 Quercus lobata HOM05D001670 ORTHO05D002980 5.7e-58 228.8 271 45.8
PSO104G0201 Papaver somniferum HOM05D001670 ORTHO05D002980 1.3e-57 227.6 271 44.6
Duzib268G0141 Durio zibethinus HOM05D001670 ORTHO05D002980 1.7e-57 227.3 271 45.8
Phvul.010G056800 Phaseolus vulgaris HOM05D001670 ORTHO05D002980 2.2e-57 226.9 271 43.9
TAR629G1646 Trochodendron aralioides HOM05D001670 ORTHO05D002980 2.8e-57 226.5 271 45.0
Ciclev10018430m.g Citrus clementina HOM05D001670 ORTHO05D002980 4.9e-57 225.7 271 43.5
Manes.01G270100 Manihot esculenta HOM05D001670 ORTHO05D002980 4.9e-57 225.7 271 45.0
EL10Ac1g00822 Beta vulgaris HOM05D001670 ORTHO05D002980 6.3e-57 225.3 276 41.7
Hund17061 Selenicereus undatus HOM05D001670 ORTHO05D002980 8.3e-57 224.9 271 43.5
MELO3C005963.2 Cucumis melo HOM05D001670 ORTHO05D002980 1.1e-56 224.6 271 43.9
Gohir.D12G098300 Gossypium hirsutum HOM05D001670 ORTHO05D002980 1.4e-56 224.2 271 43.2
DCAR_025093 Daucus carota HOM05D001670 ORTHO05D002980 3.1e-56 223.0 271 43.9
Sed0002470 Sechium edule HOM05D001670 ORTHO05D002980 3.1e-56 223.0 271 43.2
Migut.B01578 Erythranthe guttata HOM05D001670 ORTHO05D002980 5.4e-56 222.2 275 45.1
PSO421G0693 Papaver somniferum HOM05D001670 ORTHO05D002980 5.4e-56 222.2 271 44.3
TWI14G1227 Tripterygium wilfordii HOM05D001670 ORTHO05D002980 5.4e-56 222.2 275 41.1
Gorai.008G107100 Gossypium raimondii HOM05D001670 ORTHO05D002980 1.6e-55 220.7 271 42.8
ClCG05G000260 Citrullus lanatus HOM05D001670 ORTHO05D002980 4.5e-55 219.2 271 42.4
CsaV3_3G007410 Cucumis sativus L. HOM05D001670 ORTHO05D002980 7.8e-55 218.4 271 43.2
GSVIVG01018721001 Vitis vinifera HOM05D001670 ORTHO05D002980 7.8e-55 218.4 271 44.6
ECA234G2815 Erigeron canadensis HOM05D001670 ORTHO05D002980 1.0e-54 218.0 274 45.6
Hund27384 Selenicereus undatus HOM05D001670 ORTHO05D002980 1.3e-54 217.6 271 40.6
TAR375G0686 Trochodendron aralioides HOM05D001670 ORTHO05D002980 1.3e-54 217.6 271 43.2
Gorai.007G088100 Gossypium raimondii HOM05D001670 ORTHO05D002980 2.9e-54 216.5 279 42.3
PSO170G5961 Papaver somniferum HOM05D001670 ORTHO05D002980 5.0e-54 215.7 271 43.9
SalBow5G2000 Salvia bowleyana HOM05D001670 ORTHO05D002980 6.6e-54 215.3 275 45.1
TWI59G0301 Tripterygium wilfordii HOM05D001670 ORTHO05D002980 1.1e-53 214.5 271 40.6
PSO017G3667 Papaver somniferum HOM05D001670 ORTHO05D002980 2.5e-53 213.4 271 42.8
Dinv06565 Davidia involucrata HOM05D001670 ORTHO05D002980 7.3e-53 211.8 281 42.0
Aqoxy6G02523 Aquilegia oxysepala HOM05D001670 ORTHO05D002980 2.1e-52 210.3 270 41.9
Aqoxy7G00778 Aquilegia oxysepala HOM05D001670 ORTHO05D002980 3.6e-52 209.5 271 42.1
HPP92_007431 Vanilla planifolia HOM05D001670 ORTHO05D002980 1.2e-50 204.5 268 43.7
Ah.05g173600 Amaranthus hybridus HOM05D001670 ORTHO05D002980 3.4e-50 203.0 269 40.1
Atru.chr1.760 Acer truncatum HOM05D001670 ORTHO05D002980 1.3e-49 201.1 270 42.6
Rhsim03G0166300 Rhododendron simsii HOM05D001670 ORTHO05D002980 4.9e-49 199.1 272 41.9
CSS0024398 Camellia sinensis var. sinensis HOM05D001670 ORTHO05D002980 5.4e-48 195.7 198 50.0
BcaC08g44594 Brassica carinata HOM05D001670 ORTHO05D002980 7.0e-48 195.3 271 39.5
C06p20660 Brassica napus HOM05D001670 ORTHO05D002980 7.0e-48 195.3 271 39.5
BolC6t37249H Brassica oleracea HOM05D001670 ORTHO05D002980 7.0e-48 195.3 271 39.5
BcaB02g07859 Brassica carinata HOM05D001670 ORTHO05D002980 9.2e-48 194.9 271 40.6
Aa31LG1G11410 Aethionema arabicum HOM05D001670 ORTHO05D002980 1.2e-47 194.5 267 40.4
BcaNung05012 Brassica carinata HOM05D001670 ORTHO05D002980 1.6e-47 194.1 269 39.8
A09p69240 Brassica napus HOM05D001670 ORTHO05D002980 1.6e-47 194.1 269 39.8
C08p54060 Brassica napus HOM05D001670 ORTHO05D002980 1.6e-47 194.1 269 39.8
BolC8t52916H Brassica oleracea HOM05D001670 ORTHO05D002980 1.6e-47 194.1 269 39.8
A07p21180 Brassica napus HOM05D001670 ORTHO05D002980 2.7e-47 193.4 269 39.4
BraA07t29805Z Brassica rapa HOM05D001670 ORTHO05D002980 2.7e-47 193.4 269 39.4
BcaB03g13629 Brassica carinata HOM05D001670 ORTHO05D002980 6.0e-47 192.2 271 38.7
BraA09t42277Z Brassica rapa HOM05D001670 ORTHO05D002980 1.0e-46 191.4 269 39.4
Os10g0556700 Oryza sativa ssp. japonica HOM05D001670 ORTHO05D002980 1.0e-46 191.4 270 41.1
BcaC04g24208 Brassica carinata HOM05D001670 ORTHO05D002980 1.7e-46 190.7 270 39.3
BolC9t52941H Brassica oleracea HOM05D001670 ORTHO05D002980 1.7e-46 190.7 270 39.3
Thhalv10006521m.g Eutrema salsugineum HOM05D001670 ORTHO05D002980 5.0e-46 189.1 272 37.5
Thecc.03G154200 Theobroma cacao HOM05D001670 ORTHO05D002980 5.0e-46 189.1 271 40.2
Zm00001eb404410 Zea mays HOM05D001670 ORTHO05D002980 5.0e-46 189.1 291 39.2
Zm00001eb000340 Zea mays HOM05D001670 ORTHO05D002980 6.6e-46 188.7 269 41.3
Duzib068G1107 Durio zibethinus HOM05D001670 ORTHO05D002980 8.6e-46 188.3 271 38.7
CDE09G0971 Ceratophyllum demersum HOM05D001670 ORTHO05D002980 1.1e-45 188.0 279 37.3
BcaC07g42342 Brassica carinata HOM05D001670 ORTHO05D002980 1.5e-45 187.6 269 38.7
C05p00130 Brassica napus HOM05D001670 ORTHO05D002980 2.5e-45 186.8 271 37.6
BolC5t28803H Brassica oleracea HOM05D001670 ORTHO05D002980 2.5e-45 186.8 271 37.6
CARHR000250 Cardamine hirsuta HOM05D001670 ORTHO05D002980 2.5e-45 186.8 271 38.0
AL1G10200 Arabidopsis lyrata HOM05D001670 ORTHO05D002980 5.6e-45 185.7 271 39.5
ATR0317G075 Amborella trichopoda HOM05D001670 ORTHO05D002980 7.3e-45 185.3 269 39.4
Sp1g00220 Schrenkiella parvula HOM05D001670 ORTHO05D002980 7.3e-45 185.3 271 39.5
Carub.0001s0015 Capsella rubella HOM05D001670 ORTHO05D002980 1.6e-44 184.1 271 38.4
SHI13579 Sapria himalayana HOM05D001670 ORTHO05D002980 2.1e-44 183.7 281 38.8
Pp3c21_18770 Physcomitrium patens HOM05D001670 ORTHO05D002980 2.8e-44 183.3 272 38.2
THA.LOC104814077 Tarenaya hassleriana HOM05D001670 ORTHO05D002980 2.8e-44 183.3 262 39.7
A10p00140 Brassica napus HOM05D001670 ORTHO05D002980 3.6e-44 183.0 271 37.6
BraA10t42293Z Brassica rapa HOM05D001670 ORTHO05D002980 3.6e-44 183.0 271 37.6
C09p00060 Brassica napus HOM05D001670 ORTHO05D002980 8.0e-44 181.8 267 37.1
BraA09t35680Z Brassica rapa HOM05D001670 ORTHO05D002980 8.0e-44 181.8 267 37.1
THA.LOC104801485 Tarenaya hassleriana HOM05D001670 ORTHO05D002980 1.1e-43 181.4 262 39.3
vmacro06810 Vaccinium macrocarpon HOM05D001670 ORTHO05D002980 5.2e-43 179.1 203 45.3
AT1G02080 Arabidopsis thaliana HOM05D001670 ORTHO05D002980 1.2e-42 177.9 271 36.9
Lsat_1_v5_gn_8_148781 Lactuca sativa HOM05D001670 ORTHO05D002980 7.5e-42 175.3 155 57.4
MBI04_g09509_MAGBIO Magnolia biondii HOM05D001670 ORTHO05D002980 9.8e-42 174.9 271 37.6
CDE11G0683 Ceratophyllum demersum HOM05D001670 ORTHO05D002980 4.9e-41 172.6 249 38.2
CARHR248060 Cardamine hirsuta HOM05D001670 ORTHO05D002980 6.4e-41 172.2 270 36.7
Mapoly0037s0011 Marchantia polymorpha HOM05D001670 ORTHO05D002980 1.4e-40 171.0 271 36.9
CAN.G78.29 Capsicum annuum HOM05D001670 ORTHO05D002980 1.9e-40 170.6 168 51.2
MBI14_g46621_MAGBIO Magnolia biondii HOM05D001670 ORTHO05D002980 9.5e-37 158.3 162 46.3
CBR_g37673 Chara braunii HOM05D001670 ORTHO05D002980 1.2e-36 157.9 272 34.2
MBI03_g02274_MAGBIO Magnolia biondii HOM05D001670 ORTHO05D002980 3.6e-36 156.4 158 46.8
unitig_0.g1315 Utricularia gibba HOM05D001670 ORTHO05D002980 1.8e-35 154.1 159 48.4
SMO340G0305 Selaginella moellendorffii HOM05D001670 ORTHO05D002980 2.3e-35 153.7 270 33.7
MBI02_g32971_MAGBIO Magnolia biondii HOM05D001670 ORTHO05D002980 4.9e-33 146.0 162 42.6
CSS0045688 Camellia sinensis var. sinensis HOM05D001670 ORTHO05D011598 1.4e-32 144.4 201 43.3
MBI15_g00866_MAGBIO Magnolia biondii HOM05D001670 ORTHO05D002980 1.4e-32 144.4 133 49.6
Pp3c5_6540 Physcomitrium patens HOM05D001670 ORTHO05D002980 3.2e-32 143.3 277 34.3
Gohir.D11G082433 Gossypium hirsutum HOM05D001670 ORTHO05D002980 1.5e-26 124.4 114 50.0
Pp3c6_26730 Physcomitrium patens HOM05D001670 ORTHO05D002980 1.7e-25 120.9 187 34.8
PGSC0003DMG400000049 Solanum tuberosum HOM05D001670 ORTHO05D002980 9.2e-24 115.2 198 35.4
Actinidia24999 Actinidia chinensis HOM05D001670 ORTHO05D002980 3.5e-23 113.2 156 40.4
TAR629G1810 Trochodendron aralioides HOM05D004423 ORTHO05D005464 1.7e-22 110.9 151 39.7
Gohir.A12G095700 Gossypium hirsutum HOM05D001670 ORTHO05D002980 4.3e-21 106.3 162 36.4
Oeu061519.1 Olea europaea HOM05D001670 ORTHO05D002980 1.5e-18 97.8 137 38.7
Lsat_1_v5_gn_1_96960 Lactuca sativa HOM05D001670 ORTHO05D002980 5.8e-18 95.9 65 64.6
Lsat_1_v5_gn_9_10320 Lactuca sativa HOM05D001670 ORTHO05D002980 5.8e-18 95.9 74 59.5
AagrBONN_evm.TU.Sc2ySwM_362.1757 Anthoceros agrestis HOM05D001670 ORTHO05D002980 1.1e-16 91.7 269 26.0
A09p00800 Brassica napus HOM05D001670 ORTHO05D002980 4.2e-16 89.7 97 47.4
MCO11G155 Micromonas commoda HOM05D001670 ORTHO05D002980 2.7e-15 87.0 283 27.6
PRCOL_00002164 Prasinoderma coloniale HOM05D001670 ORTHO05D002980 6.6e-14 82.4 260 28.8
Cre14.g632950 Chlamydomonas reinhardtii HOM05D001670 ORTHO05D002980 1.9e-13 80.9 262 24.8
MBI05_g15359_MAGBIO Magnolia biondii HOM05D003323 ORTHO05D011598 9.3e-08 62.0 42 57.1
Gohir.D11G082400 Gossypium hirsutum HOM05D001670 ORTHO05D002980 2.7e-07 60.5 121 30.6
Gohir.A11G078000 Gossypium hirsutum HOM05D001670 ORTHO05D002980 1.0e-06 58.5 121 29.8
Actinidia21286 Actinidia chinensis HOM05D001670 ORTHO05D011598 2.3e-06 57.4 60 48.3


User provided reference genes

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