Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr16g0516131 Helianthus annuus HOM05D001758 ORTHO05D017200 4.2e-101 371.3 182 100.0
HanXRQChr05g0145951 Helianthus annuus HOM05D001758 ORTHO05D017200 1.5e-98 362.8 182 98.4
HanXRQChr13g0394171 Helianthus annuus HOM05D001758 ORTHO05D004430 3.6e-92 341.7 175 96.6
HanXRQChr13g0416041 Helianthus annuus HOM05D001758 ORTHO05D004430 2.2e-86 322.4 175 86.9
Lsat_1_v5_gn_6_86320 Lactuca sativa HOM05D001758 ORTHO05D004430 1.9e-85 319.3 173 87.9
ECA240G1636 Erigeron canadensis HOM05D001758 ORTHO05D004430 2.5e-85 318.9 175 85.1
ECA233G5934 Erigeron canadensis HOM05D001758 ORTHO05D004430 4.2e-85 318.2 175 86.3
Dinv38922 Davidia involucrata HOM05D001758 ORTHO05D004430 7.5e-82 307.4 176 83.0
Lj8A218T22 Lonicera japonica HOM05D001758 ORTHO05D004430 7.5e-82 307.4 175 80.0
CSS0038252 Camellia sinensis var. sinensis HOM05D001758 ORTHO05D004430 9.7e-82 307.0 175 82.3
vmacro13195 Vaccinium macrocarpon HOM05D001758 ORTHO05D004430 1.3e-81 306.6 175 81.7
Rhsim07G0088700 Rhododendron simsii HOM05D001758 ORTHO05D004430 2.2e-81 305.8 175 81.7
TAR625G0205 Trochodendron aralioides HOM05D001758 ORTHO05D004430 2.2e-81 305.8 175 80.0
Lsat_1_v5_gn_6_5441 Lactuca sativa HOM05D001758 ORTHO05D004430 2.8e-81 305.4 175 82.3
Peaxi162Scf00074g02036 Petunia axillaris HOM05D001758 ORTHO05D004430 3.7e-81 305.1 175 81.7
DCAR_005564 Daucus carota HOM05D001758 ORTHO05D004430 6.3e-81 304.3 173 83.2
SalBow1G0547 Salvia bowleyana HOM05D001758 ORTHO05D004430 1.1e-80 303.5 175 80.0
CSS0009285 Camellia sinensis var. sinensis HOM05D001758 ORTHO05D004430 3.1e-80 302.0 175 80.6
Oeu011033.1 Olea europaea HOM05D001758 ORTHO05D004430 7.0e-80 300.8 175 80.0
CSS0019297 Camellia sinensis var. sinensis HOM05D001758 ORTHO05D004430 9.1e-80 300.4 175 80.0
Nitab4.5_0001522g0060 Nicotiana tabacum HOM05D001758 ORTHO05D004430 9.1e-80 300.4 175 81.1
CAN.G532.6 Capsicum annuum HOM05D001758 ORTHO05D004430 2.0e-79 299.3 175 80.6
Actinidia14582 Actinidia chinensis HOM05D001758 ORTHO05D004430 2.7e-79 298.9 175 80.6
arahy.Tifrunner.gnm1.ann1.AY0C6D Arachis hypogaea HOM05D001758 ORTHO05D004430 4.5e-79 298.1 174 80.5
SGA_v2.0_scaffold48G18078 Striga asiatica HOM05D001758 ORTHO05D004430 5.9e-79 297.7 175 78.3
AUR62027253 Chenopodium quinoa HOM05D001758 ORTHO05D004430 7.7e-79 297.4 175 80.0
MBI07_g21076_MAGBIO Magnolia biondii HOM05D001758 ORTHO05D004430 1.0e-78 297.0 175 79.4
vmacro13146 Vaccinium macrocarpon HOM05D001758 ORTHO05D004430 1.3e-78 296.6 168 82.7
Glyma.01G227000 Glycine max HOM05D001758 ORTHO05D004430 1.7e-78 296.2 175 79.4
Nitab4.5_0002975g0020 Nicotiana tabacum HOM05D001758 ORTHO05D004430 1.7e-78 296.2 175 79.4
arahy.Tifrunner.gnm1.ann1.KK02P6 Arachis hypogaea HOM05D001758 ORTHO05D004430 3.8e-78 295.0 174 79.9
MSTRG.1854 Avicennia marina HOM05D001758 ORTHO05D004430 3.8e-78 295.0 175 78.3
AUR62010715 Chenopodium quinoa HOM05D001758 ORTHO05D004430 5.0e-78 294.7 175 78.9
Cc08_g15000 Coffea canephora HOM05D001758 ORTHO05D004430 5.0e-78 294.7 175 76.6
TPR.G22570 Trifolium pratense HOM05D001758 ORTHO05D004430 6.5e-78 294.3 175 78.3
EL10Ac5g12803 Beta vulgaris HOM05D001758 ORTHO05D004430 1.1e-77 293.5 175 77.7
Ciclev10018786m.g Citrus clementina HOM05D001758 ORTHO05D004430 1.1e-77 293.5 175 78.3
Glyma.12G021600 Glycine max HOM05D001758 ORTHO05D004430 1.1e-77 293.5 175 78.3
PSO675G0536 Papaver somniferum HOM05D001758 ORTHO05D004430 1.1e-77 293.5 174 77.0
Solyc08g081320.3 Solanum lycopersicum HOM05D001758 ORTHO05D004430 1.1e-77 293.5 175 78.3
Sopen08g029630 Solanum pennellii HOM05D001758 ORTHO05D004430 1.1e-77 293.5 175 78.3
Migut.E01190 Erythranthe guttata HOM05D001758 ORTHO05D004430 1.5e-77 293.1 175 76.0
Glyma.11G015700 Glycine max HOM05D001758 ORTHO05D004430 1.9e-77 292.7 175 78.3
Glyma.11G095501 Glycine max HOM05D001758 ORTHO05D004430 3.2e-77 292.0 175 78.3
Potri.003G130400 Populus trichocarpa HOM05D001758 ORTHO05D004430 3.2e-77 292.0 175 77.1
PSO541G5667 Papaver somniferum HOM05D001758 ORTHO05D004430 4.2e-77 291.6 174 76.4
Lj3g0022998 Lotus japonicus HOM05D001758 ORTHO05D004430 9.4e-77 290.4 174 78.2
RcHm_v2.0_Chr7g0197091 Rosa chinensis HOM05D001758 ORTHO05D004430 9.4e-77 290.4 175 76.6
VMungo1215G2939 Vigna mungo HOM05D001758 ORTHO05D004430 9.4e-77 290.4 175 77.1
Medtr4g076210 Medicago truncatula HOM05D001758 ORTHO05D004430 1.6e-76 289.7 175 77.7
VMungo1127G1185 Vigna mungo HOM05D001758 ORTHO05D004430 1.6e-76 289.7 175 76.6
Hund14840 Selenicereus undatus HOM05D001758 ORTHO05D004430 2.1e-76 289.3 175 77.7
PGSC0003DMG400012194 Solanum tuberosum HOM05D001758 ORTHO05D004430 2.7e-76 288.9 175 77.1
Eucgr.D01829 Eucalyptus grandis HOM05D001758 ORTHO05D004430 3.6e-76 288.5 175 75.4
Lalb_Chr05g0211451 Lupinus albus HOM05D001758 ORTHO05D004430 3.6e-76 288.5 175 76.0
QL12p032420 Quercus lobata HOM05D001758 ORTHO05D004430 4.7e-76 288.1 174 77.6
Manes.02G136100 Manihot esculenta HOM05D001758 ORTHO05D004430 8.0e-76 287.3 175 78.3
FvH4_5g02830 Fragaria vesca HOM05D001758 ORTHO05D004430 1.8e-75 286.2 175 74.3
FAN18G3406 Fragaria x ananassa HOM05D001758 ORTHO05D004430 1.8e-75 286.2 175 74.3
Potri.001G101400 Populus trichocarpa HOM05D001758 ORTHO05D004430 1.8e-75 286.2 175 75.4
FAN04G0007 Fragaria x ananassa HOM05D001758 ORTHO05D004430 3.0e-75 285.4 175 74.3
FAN08G0671 Fragaria x ananassa HOM05D001758 ORTHO05D004430 3.0e-75 285.4 175 74.3
Nn6g31920 Nelumbo nucifera HOM05D001758 ORTHO05D004430 5.2e-75 284.6 175 76.0
Psat7g179680 Pisum sativum HOM05D001758 ORTHO05D004430 5.2e-75 284.6 174 75.9
Prupe.5G103900 Prunus persica HOM05D001758 ORTHO05D004430 5.2e-75 284.6 174 77.0
Sabra01G0076400 Salix brachista HOM05D001758 ORTHO05D004430 5.2e-75 284.6 175 75.4
SGA_v2.0_scaffold144G35913 Striga asiatica HOM05D001758 ORTHO05D004430 5.2e-75 284.6 168 77.4
Aqoxy5G01113 Aquilegia oxysepala HOM05D001758 ORTHO05D004430 6.8e-75 284.3 175 74.9
Lsat_1_v5_gn_3_6140 Lactuca sativa HOM05D001758 ORTHO05D004430 6.8e-75 284.3 175 76.6
ClCG02G002170 Citrullus lanatus HOM05D001758 ORTHO05D004430 8.8e-75 283.9 174 75.3
Phvul.002G034100 Phaseolus vulgaris HOM05D001758 ORTHO05D004430 1.2e-74 283.5 175 76.6
Phvul.011G078200 Phaseolus vulgaris HOM05D001758 ORTHO05D004430 1.2e-74 283.5 175 75.4
MD14G1108600 Malus domestica HOM05D001758 ORTHO05D004430 1.5e-74 283.1 174 75.3
MD06G1087800 Malus domestica HOM05D001758 ORTHO05D004430 2.6e-74 282.3 174 75.3
Sed0023378 Sechium edule HOM05D001758 ORTHO05D004430 2.6e-74 282.3 175 74.3
ATR0329G044 Amborella trichopoda HOM05D001758 ORTHO05D004430 3.4e-74 282.0 175 74.3
Cfa012203 Carpinus fangiana HOM05D001758 ORTHO05D004430 3.4e-74 282.0 175 76.0
Gorai.004G213900 Gossypium raimondii HOM05D001758 ORTHO05D004430 3.4e-74 282.0 175 75.4
GSVIVG01019391001 Vitis vinifera HOM05D001758 ORTHO05D004430 3.4e-74 282.0 175 74.3
FAN13G1114 Fragaria x ananassa HOM05D001758 ORTHO05D004430 4.4e-74 281.6 175 73.1
unitig_62.g23540 Utricularia gibba HOM05D001758 ORTHO05D017200 4.4e-74 281.6 175 74.3
CiPaw.12G091200 Carya illinoinensis HOM05D001758 ORTHO05D004430 5.7e-74 281.2 175 74.3
Gohir.D08G202500 Gossypium hirsutum HOM05D001758 ORTHO05D004430 7.5e-74 280.8 175 74.9
Gohir.D03G149700 Gossypium hirsutum HOM05D001758 ORTHO05D004430 9.8e-74 280.4 175 74.9
Gorai.003G157000 Gossypium raimondii HOM05D001758 ORTHO05D004430 1.3e-73 280.0 175 74.9
Lalb_Chr16g0376841 Lupinus albus HOM05D001758 ORTHO05D004430 1.3e-73 280.0 175 74.9
Haze_08813 Corylus avellana HOM05D001758 ORTHO05D004430 1.7e-73 279.6 175 74.9
TWI60G1699 Tripterygium wilfordii HOM05D001758 ORTHO05D004430 1.7e-73 279.6 175 73.7
COL.COLO4_34497 Corchorus olitorius HOM05D001758 ORTHO05D004430 2.8e-73 278.9 175 74.3
Sed0001016 Sechium edule HOM05D001758 ORTHO05D004430 2.8e-73 278.9 175 72.6
Gohir.A03G019300 Gossypium hirsutum HOM05D001758 ORTHO05D004430 3.7e-73 278.5 175 73.7
Oeu007743.2 Olea europaea HOM05D001758 ORTHO05D004430 3.7e-73 278.5 175 74.9
HPP92_008911 Vanilla planifolia HOM05D001758 ORTHO05D004430 3.7e-73 278.5 175 73.7
Atru.chr9.2154 Acer truncatum HOM05D001758 ORTHO05D004430 4.8e-73 278.1 175 72.6
CANSAT21G2030 Cannabis sativa HOM05D001758 ORTHO05D004430 6.3e-73 277.7 174 74.1
THA.LOC104806416 Tarenaya hassleriana HOM05D001758 ORTHO05D004430 8.3e-73 277.3 175 74.3
Carub.0006s3029 Capsella rubella HOM05D001758 ORTHO05D004430 1.4e-72 276.6 175 74.3
MELO3C005693.2 Cucumis melo HOM05D001758 ORTHO05D004430 1.8e-72 276.2 175 73.1
Duzib084G0730 Durio zibethinus HOM05D001758 ORTHO05D004430 2.4e-72 275.8 175 73.7
Thecc.03G282700 Theobroma cacao HOM05D001758 ORTHO05D004430 2.4e-72 275.8 174 74.1
Sabra03G0092700 Salix brachista HOM05D001758 ORTHO05D004430 3.1e-72 275.4 175 72.6
Os03g0355600 Oryza sativa ssp. japonica HOM05D001758 ORTHO05D004430 4.1e-72 275.0 174 74.7
CARHR255190 Cardamine hirsuta HOM05D001758 ORTHO05D004430 5.4e-72 274.6 175 72.6
THA.LOC104814663 Tarenaya hassleriana HOM05D001758 ORTHO05D004430 5.4e-72 274.6 175 73.1
Duzib205G0508 Durio zibethinus HOM05D001758 ORTHO05D004430 1.6e-71 273.1 175 71.4
CsaV3_7G003330 Cucumis sativus L. HOM05D001758 ORTHO05D004430 2.0e-71 272.7 174 72.4
MELO3C018841.2 Cucumis melo HOM05D001758 ORTHO05D004430 3.5e-71 271.9 174 73.6
Thhalv10028407m.g Eutrema salsugineum HOM05D001758 ORTHO05D004430 3.5e-71 271.9 175 72.6
CsaV3_5G002640 Cucumis sativus L. HOM05D001758 ORTHO05D004430 5.9e-71 271.2 175 72.0
Sp7g21360 Schrenkiella parvula HOM05D001758 ORTHO05D004430 1.0e-70 270.4 175 72.6
BcaB01g01638 Brassica carinata HOM05D001758 ORTHO05D004430 1.3e-70 270.0 175 72.6
AL6G45790 Arabidopsis lyrata HOM05D001758 ORTHO05D004430 1.7e-70 269.6 175 73.1
A09p27770 Brassica napus HOM05D001758 ORTHO05D004430 1.7e-70 269.6 175 72.6
BraA09t38347Z Brassica rapa HOM05D001758 ORTHO05D004430 1.7e-70 269.6 175 72.6
Thhalv10024360m.g Eutrema salsugineum HOM05D001758 ORTHO05D004430 1.7e-70 269.6 175 72.6
Sp6g06070 Schrenkiella parvula HOM05D001758 ORTHO05D004430 1.7e-70 269.6 175 72.0
Oeu042339.1 Olea europaea HOM05D001758 ORTHO05D004430 2.9e-70 268.9 160 80.0
BcaC04g21134 Brassica carinata HOM05D001758 ORTHO05D004430 1.1e-69 266.9 175 71.4
C09p35180 Brassica napus HOM05D001758 ORTHO05D004430 1.1e-69 266.9 175 71.4
BolC9t56364H Brassica oleracea HOM05D001758 ORTHO05D004430 1.1e-69 266.9 175 71.4
Carub.0007s1765 Capsella rubella HOM05D001758 ORTHO05D004430 1.1e-69 266.9 175 72.0
THA.LOC104813023 Tarenaya hassleriana HOM05D001758 ORTHO05D004430 2.5e-69 265.8 175 72.0
AL7G30000 Arabidopsis lyrata HOM05D001758 ORTHO05D004430 3.2e-69 265.4 175 72.6
AT4G11380 Arabidopsis thaliana HOM05D001758 ORTHO05D004430 5.5e-69 264.6 175 72.0
Zm00001eb394540 Zea mays HOM05D001758 ORTHO05D004430 5.5e-69 264.6 174 74.1
Aa31LG6G6650 Aethionema arabicum HOM05D001758 ORTHO05D004430 9.4e-69 263.8 175 71.4
AT4G23460 Arabidopsis thaliana HOM05D001758 ORTHO05D004430 1.2e-68 263.5 175 72.0
Zm00001eb017130 Zea mays HOM05D001758 ORTHO05D004430 2.1e-68 262.7 174 74.1
AagrBONN_evm.TU.Sc2ySwM_117.2557 Anthoceros agrestis HOM05D001758 ORTHO05D004430 2.7e-68 262.3 176 71.0
Aa31LG9G10850 Aethionema arabicum HOM05D001758 ORTHO05D004430 3.6e-68 261.9 175 69.1
A03p54320 Brassica napus HOM05D001758 ORTHO05D004430 1.0e-67 260.4 175 72.0
BraA03t14494Z Brassica rapa HOM05D001758 ORTHO05D004430 1.0e-67 260.4 175 72.0
Mapoly0002s0295 Marchantia polymorpha HOM05D001758 ORTHO05D004430 1.0e-67 260.4 176 69.3
C07p52720 Brassica napus HOM05D001758 ORTHO05D004430 1.4e-67 260.0 175 71.4
Pp3c2_18140 Physcomitrium patens HOM05D001758 ORTHO05D004430 1.8e-67 259.6 176 68.2
SEGI_36929 Sequoiadendron giganteum HOM05D001758 ORTHO05D004430 2.3e-67 259.2 176 70.5
BolC7t45772H Brassica oleracea HOM05D001758 ORTHO05D004430 3.0e-67 258.8 175 70.9
Pp3c14_2460 Physcomitrium patens HOM05D001758 ORTHO05D004430 4.0e-67 258.5 176 69.9
ClCG01G002530 Citrullus lanatus HOM05D001758 ORTHO05D004430 2.0e-66 256.1 232 56.5
Actinidia27374 Actinidia chinensis HOM05D001758 ORTHO05D004430 4.4e-66 255.0 144 82.6
Pp3c1_19340 Physcomitrium patens HOM05D001758 ORTHO05D004430 9.8e-66 253.8 176 67.0
SMO298G0016 Selaginella moellendorffii HOM05D001758 ORTHO05D004430 1.7e-65 253.1 177 65.5
CBR_g10902 Chara braunii HOM05D001758 ORTHO05D004430 2.8e-60 235.7 176 63.1
BcaNung04479 Brassica carinata HOM05D001758 ORTHO05D017200 6.1e-60 234.6 157 71.3
BcaNung01436 Brassica carinata HOM05D001758 ORTHO05D017200 5.6e-45 184.9 123 70.7
Nn5g30834 Nelumbo nucifera HOM05D001758 ORTHO05D004430 2.2e-41 172.9 94 85.1
MBI10_g48303_MAGBIO Magnolia biondii HOM05D001758 ORTHO05D004430 7.1e-40 167.9 175 52.0
Actinidia33743 Actinidia chinensis HOM05D001758 ORTHO05D004430 7.3e-37 157.9 91 84.6
Lj2A182G27 Lonicera japonica HOM05D001758 ORTHO05D017200 8.1e-36 154.5 162 53.7
Gohir.A08G184000 Gossypium hirsutum HOM05D001758 ORTHO05D004430 2.7e-31 139.4 175 44.6
BolC3t15858H Brassica oleracea HOM05D001758 ORTHO05D004430 1.1e-29 134.0 149 47.7
Cpa.g.sc180.10 Carica papaya HOM05D001758 ORTHO05D017200 3.3e-29 132.5 84 71.4
CDE02G4367 Ceratophyllum demersum HOM05D001758 ORTHO05D004430 1.4e-27 127.1 79 73.4
DCAR_008367 Daucus carota HOM05D001758 ORTHO05D004430 1.4e-27 127.1 77 76.6
MBI10_g48086_MAGBIO Magnolia biondii HOM05D001758 ORTHO05D004430 4.2e-24 115.5 66 83.3
PRCOL_00003609 Prasinoderma coloniale HOM05D001758 ORTHO05D004430 1.6e-23 113.6 178 41.6
CDE08G1656 Ceratophyllum demersum HOM05D001758 ORTHO05D004430 1.6e-20 103.6 57 82.5
Cre11.g478156 Chlamydomonas reinhardtii HOM05D001758 ORTHO05D004430 1.1e-16 90.9 181 34.3
C03p35440 Brassica napus HOM05D001758 ORTHO05D000557 1.4e-16 90.5 59 67.8
VMungo1215G0906 Vigna mungo HOM05D001758 ORTHO05D017200 6.7e-14 81.6 70 55.7
MCO01G139 Micromonas commoda HOM05D001758 ORTHO05D004430 2.0e-10 70.1 159 28.9
Actinidia27143 Actinidia chinensis HOM05D001758 ORTHO05D017200 7.6e-10 68.2 76 46.1


User provided reference genes

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