Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr15g0473481 Helianthus annuus HOM05D002121 ORTHO05D008891 1.5e-55 219.2 100 100.0
HanXRQChr05g0148721 Helianthus annuus HOM05D002121 ORTHO05D008891 6.9e-21 104.0 51 94.1
Lsat_1_v5_gn_6_97640 Lactuca sativa HOM05D002121 ORTHO05D008891 2.2e-19 99.0 51 86.3
RcHm_v2.0_Chr6g0296321 Rosa chinensis HOM05D002121 ORTHO05D008891 8.4e-19 97.1 51 84.3
TWI32G0996 Tripterygium wilfordii HOM05D002121 ORTHO05D008891 8.4e-19 97.1 51 82.4
CSS0024419 Camellia sinensis var. sinensis HOM05D002121 ORTHO05D008891 1.1e-18 96.7 51 82.4
ClCG08G005910 Citrullus lanatus HOM05D002121 ORTHO05D008891 1.1e-18 96.7 51 82.4
Ciclev10001657m.g Citrus clementina HOM05D002121 ORTHO05D008891 1.1e-18 96.7 51 84.3
MELO3C010637.2 Cucumis melo HOM05D002121 ORTHO05D008891 1.1e-18 96.7 51 82.4
CsaV3_6G034200 Cucumis sativus L. HOM05D002121 ORTHO05D008891 1.1e-18 96.7 51 82.4
Prupe.1G492700 Prunus persica HOM05D002121 ORTHO05D008891 1.1e-18 96.7 51 82.4
SGA_v2.0_scaffold52G18936 Striga asiatica HOM05D002121 ORTHO05D008891 1.1e-18 96.7 50 86.0
GSVIVG01008832001 Vitis vinifera HOM05D002121 ORTHO05D008891 1.1e-18 96.7 51 82.4
FAN20G0023 Fragaria x ananassa HOM05D002121 ORTHO05D008891 1.4e-18 96.3 51 84.3
FAN27G1590 Fragaria x ananassa HOM05D002121 ORTHO05D008891 1.4e-18 96.3 51 84.3
Nn1g08892 Nelumbo nucifera HOM05D002121 ORTHO05D008891 1.4e-18 96.3 51 80.4
Oeu032210.1 Olea europaea HOM05D002121 ORTHO05D008891 1.4e-18 96.3 53 79.2
Actinidia03419 Actinidia chinensis HOM05D002121 ORTHO05D008891 1.9e-18 95.9 51 82.4
CiPaw.15G034100 Carya illinoinensis HOM05D002121 ORTHO05D008891 1.9e-18 95.9 51 82.4
Haze_17516 Corylus avellana HOM05D002121 ORTHO05D008891 1.9e-18 95.9 51 82.4
ECA246G4340 Erigeron canadensis HOM05D002121 ORTHO05D008891 1.9e-18 95.9 51 84.3
PSO170G0582 Papaver somniferum HOM05D002121 ORTHO05D008891 1.9e-18 95.9 51 82.4
SalBow7G2694 Salvia bowleyana HOM05D002121 ORTHO05D008891 1.9e-18 95.9 53 79.2
arahy.Tifrunner.gnm1.ann1.IC0JL2 Arachis hypogaea HOM05D002121 ORTHO05D008891 2.4e-18 95.5 51 82.4
arahy.Tifrunner.gnm1.ann1.VL2KU3 Arachis hypogaea HOM05D002121 ORTHO05D008891 2.4e-18 95.5 51 82.4
Dinv14647 Davidia involucrata HOM05D002121 ORTHO05D008891 2.4e-18 95.5 51 82.4
Sopen11g009470 Solanum pennellii HOM05D002121 ORTHO05D008891 2.4e-18 95.5 51 84.3
PGSC0003DMG400009246 Solanum tuberosum HOM05D002121 ORTHO05D008891 2.4e-18 95.5 51 84.3
Gohir.D05G239200 Gossypium hirsutum HOM05D002121 ORTHO05D008891 3.2e-18 95.1 51 82.4
Gorai.009G248000 Gossypium raimondii HOM05D002121 ORTHO05D008891 3.2e-18 95.1 51 82.4
Lalb_Chr23g0271121 Lupinus albus HOM05D002121 ORTHO05D008891 3.2e-18 95.1 51 80.4
Manes.02G166400 Manihot esculenta HOM05D002121 ORTHO05D008891 3.2e-18 95.1 51 82.4
Thecc.08G129600 Theobroma cacao HOM05D002121 ORTHO05D008891 3.2e-18 95.1 51 82.4
CAN.G1391.3 Capsicum annuum HOM05D002121 ORTHO05D008891 4.2e-18 94.7 54 77.8
Dinv27282 Davidia involucrata HOM05D002121 ORTHO05D008891 4.2e-18 94.7 51 82.4
AagrBONN_evm.TU.Sc2ySwM_228.2791 Anthoceros agrestis HOM05D002121 ORTHO05D008891 5.4e-18 94.4 51 82.4
Migut.C01114 Erythranthe guttata HOM05D002121 ORTHO05D008891 5.4e-18 94.4 53 77.4
Nitab4.5_0000111g0140 Nicotiana tabacum HOM05D002121 ORTHO05D008891 5.4e-18 94.4 51 82.4
Peaxi162Scf00310g00513 Petunia axillaris HOM05D002121 ORTHO05D008891 5.4e-18 94.4 54 79.6
Phvul.009G127600 Phaseolus vulgaris HOM05D002121 ORTHO05D008891 5.4e-18 94.4 51 80.4
DCAR_014379 Daucus carota HOM05D001700 ORTHO05D002131 7.1e-18 94.0 51 78.4
Gohir.A05G237100 Gossypium hirsutum HOM05D002121 ORTHO05D008891 7.1e-18 94.0 51 80.4
Sc15g0002960 Simmondsia chinensis HOM05D002121 ORTHO05D008891 7.1e-18 94.0 53 81.1
Atru.chr13.1527 Acer truncatum HOM05D002121 ORTHO05D008891 9.3e-18 93.6 51 78.4
MSTRG.25368 Avicennia marina HOM05D002121 ORTHO05D008891 9.3e-18 93.6 53 75.5
FvH4_2g27490 Fragaria vesca HOM05D002121 ORTHO05D008891 9.3e-18 93.6 50 84.0
FAN15G1848 Fragaria x ananassa HOM05D002121 ORTHO05D008891 9.3e-18 93.6 50 84.0
Glyma.06G115500 Glycine max HOM05D002121 ORTHO05D008891 9.3e-18 93.6 51 80.4
MBI06_g04552_MAGBIO Magnolia biondii HOM05D002121 ORTHO05D008891 9.3e-18 93.6 51 80.4
Rhsim11G0070100 Rhododendron simsii HOM05D002121 ORTHO05D008891 9.3e-18 93.6 51 80.4
TAR376G0507 Trochodendron aralioides HOM05D002121 ORTHO05D008891 9.3e-18 93.6 51 80.4
CANSAT25G1674 Cannabis sativa HOM05D002121 ORTHO05D008891 1.2e-17 93.2 51 80.4
Cc10_g12290 Coffea canephora HOM05D002121 ORTHO05D008891 1.2e-17 93.2 51 78.4
Duzib093G0305 Durio zibethinus HOM05D002121 ORTHO05D008891 1.2e-17 93.2 51 82.4
Aqoxy6G00263 Aquilegia oxysepala HOM05D002121 ORTHO05D008891 1.6e-17 92.8 51 82.4
Cpa.g.sc64.123 Carica papaya HOM05D002121 ORTHO05D008891 1.6e-17 92.8 56 71.4
CDE08G1413 Ceratophyllum demersum HOM05D002121 ORTHO05D008891 1.6e-17 92.8 51 78.4
Lj1g0016880 Lotus japonicus HOM05D002121 ORTHO05D008891 1.6e-17 92.8 51 80.4
EL10Ac1g00004 Beta vulgaris HOM05D002121 ORTHO05D008891 2.1e-17 92.4 51 76.5
AUR62002267 Chenopodium quinoa HOM05D002121 ORTHO05D008891 2.7e-17 92.0 51 76.5
Hund17311 Selenicereus undatus HOM05D002121 ORTHO05D008891 2.7e-17 92.0 50 82.0
Zm00001eb243580 Zea mays HOM05D002121 ORTHO05D008891 2.7e-17 92.0 51 78.4
Eucgr.F03811 Eucalyptus grandis HOM05D002121 ORTHO05D008891 3.5e-17 91.7 51 78.4
Os02g0552600 Oryza sativa ssp. japonica HOM05D002121 ORTHO05D008891 3.5e-17 91.7 51 76.5
QL09p033741 Quercus lobata HOM05D002121 ORTHO05D008891 3.5e-17 91.7 51 80.4
Ah.05g171490 Amaranthus hybridus HOM05D002121 ORTHO05D008891 6.0e-17 90.9 51 76.5
AUR62015427 Chenopodium quinoa HOM05D002121 ORTHO05D008891 6.0e-17 90.9 50 78.0
VMungo1309G2347 Vigna mungo HOM05D002121 ORTHO05D008891 6.0e-17 90.9 51 78.4
HPP92_011391 Vanilla planifolia HOM05D002121 ORTHO05D008891 7.9e-17 90.5 54 72.2
FAN24G0685 Fragaria x ananassa HOM05D002121 ORTHO05D008891 1.0e-16 90.1 50 82.0
unitig_699.g19768 Utricularia gibba HOM05D002121 ORTHO05D003088 1.8e-16 89.4 51 80.4
THA.LOC104800213 Tarenaya hassleriana HOM05D002121 ORTHO05D008891 3.9e-16 88.2 50 80.0
BcaB03g12775 Brassica carinata HOM05D002121 ORTHO05D008891 5.1e-16 87.8 50 78.0
BcaB03g12777 Brassica carinata HOM05D002121 ORTHO05D008891 5.1e-16 87.8 50 78.0
BcaB07g32168 Brassica carinata HOM05D002121 ORTHO05D008891 5.1e-16 87.8 50 78.0
BcaC05g26090 Brassica carinata HOM05D002121 ORTHO05D008891 5.1e-16 87.8 50 78.0
A06p17800 Brassica napus HOM05D002121 ORTHO05D004000 5.1e-16 87.8 50 78.0
C05p20690 Brassica napus HOM05D002121 ORTHO05D004000 5.1e-16 87.8 50 78.0
BolC5t30768H Brassica oleracea HOM05D002121 ORTHO05D004000 5.1e-16 87.8 50 78.0
BraA06t24872Z Brassica rapa HOM05D002121 ORTHO05D008891 5.1e-16 87.8 50 78.0
AL1G34880 Arabidopsis lyrata HOM05D002121 ORTHO05D008891 6.7e-16 87.4 51 74.5
AT1G21710 Arabidopsis thaliana HOM05D002121 ORTHO05D008891 6.7e-16 87.4 51 74.5
Pp3c15_7530 Physcomitrium patens HOM05D002121 ORTHO05D008891 8.7e-16 87.0 50 72.0
Thhalv10008051m.g Eutrema salsugineum HOM05D002121 ORTHO05D008891 1.1e-15 86.7 50 76.0
SEGI_00220 Sequoiadendron giganteum HOM05D002121 ORTHO05D008891 1.1e-15 86.7 51 70.6
SEGI_39313 Sequoiadendron giganteum HOM05D002121 ORTHO05D008891 1.1e-15 86.7 51 70.6
Carub.0001s2115 Capsella rubella HOM05D002121 ORTHO05D008891 1.5e-15 86.3 50 76.0
Ca_16577_v3 Cicer arietinum L. HOM05D002121 ORTHO05D008891 1.5e-15 86.3 50 72.0
Aa31LG7G5680 Aethionema arabicum HOM05D002121 ORTHO05D008891 1.9e-15 85.9 50 76.0
ATR0709G083 Amborella trichopoda HOM05D002121 ORTHO05D008891 1.9e-15 85.9 51 72.5
CARHR022070 Cardamine hirsuta HOM05D002121 ORTHO05D008891 1.9e-15 85.9 50 76.0
Mapoly0066s0098 Marchantia polymorpha HOM05D002121 ORTHO05D008891 1.9e-15 85.9 50 74.0
Psat5g086080 Pisum sativum HOM05D002121 ORTHO05D008891 1.9e-15 85.9 50 72.0
Sp1g19270 Schrenkiella parvula HOM05D002121 ORTHO05D008891 3.3e-15 85.1 50 74.0
Potri.005G180700 Populus trichocarpa HOM05D002121 ORTHO05D008891 4.3e-15 84.7 51 72.5
Sabra05G0136700 Salix brachista HOM05D002121 ORTHO05D008891 4.3e-15 84.7 51 72.5
Medtr3g088510 Medicago truncatula HOM05D002121 ORTHO05D008891 7.4e-15 84.0 50 68.0
SMO367G0241 Selaginella moellendorffii HOM05D002121 ORTHO05D008891 3.7e-14 81.6 50 68.0
Sc15g0002970 Simmondsia chinensis HOM05D002121 ORTHO05D008891 8.1e-14 80.5 76 56.6
MCO08G296 Micromonas commoda HOM05D002121 ORTHO05D008891 1.8e-13 79.3 53 66.0
COL.COLO4_37918 Corchorus olitorius HOM05D002121 ORTHO05D008891 9.0e-13 77.0 87 48.3
vmacro00852 Vaccinium macrocarpon HOM05D002121 ORTHO05D008891 1.5e-12 76.3 92 46.7
CAN.G1347.2 Capsicum annuum HOM05D002121 ORTHO05D008891 2.0e-12 75.9 59 61.0
Cre01.g063632 Chlamydomonas reinhardtii HOM05D002121 ORTHO05D008891 1.7e-11 72.8 50 66.0
Lj7A344T50 Lonicera japonica HOM05D002121 ORTHO05D008891 6.5e-11 70.9 36 77.8
Solyc11g018510.2 Solanum lycopersicum HOM05D002121 ORTHO05D008891 6.5e-11 70.9 34 88.2
DCAR_002302 Daucus carota HOM05D002121 ORTHO05D008891 1.1e-10 70.1 38 73.7
Hma1.2p1_0612F.1_g188790 Hydrangea macrophylla HOM05D002121 ORTHO05D008891 1.1e-10 70.1 36 77.8
Sed0022381 Sechium edule HOM05D002121 ORTHO05D008891 1.4e-10 69.7 35 77.1
Migut.C00404 Erythranthe guttata HOM05D002121 ORTHO05D008891 1.3e-08 63.2 56 58.9


User provided reference genes

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