Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr13g0393421 Helianthus annuus HOM05D006900 ORTHO05D008651 5.1e-194 681.8 633 100.0
Lsat_1_v5_gn_6_18120 Lactuca sativa HOM05D006900 ORTHO05D008651 6.5e-141 505.4 650 84.2
ECA233G1261 Erigeron canadensis HOM05D006900 ORTHO05D008651 5.7e-121 439.1 641 82.5
TAR362G0296 Trochodendron aralioides HOM05D006900 ORTHO05D008651 4.0e-98 363.2 652 71.9
Solyc04g009020.4 Solanum lycopersicum HOM05D006900 ORTHO05D008651 1.5e-97 361.3 658 71.4
Peaxi162Scf00681g00223 Petunia axillaris HOM05D006900 ORTHO05D008651 2.6e-97 360.5 674 69.7
PGSC0003DMG400011531 Solanum tuberosum HOM05D006900 ORTHO05D008651 7.5e-97 359.0 658 71.0
Sopen04g004200 Solanum pennellii HOM05D006900 ORTHO05D008651 4.9e-96 356.3 664 70.9
Lj6A690T75 Lonicera japonica HOM05D006900 ORTHO05D008651 2.7e-94 350.5 590 76.6
CSS0034541 Camellia sinensis var. sinensis HOM05D006900 ORTHO05D008651 4.6e-94 349.7 578 78.4
CAN.G274.12 Capsicum annuum HOM05D006900 ORTHO05D008651 1.0e-93 348.6 663 70.3
Potri.010G145000 Populus trichocarpa HOM05D006900 ORTHO05D008651 3.9e-93 346.7 658 69.6
Manes.03G204600 Manihot esculenta HOM05D006900 ORTHO05D008651 2.5e-92 344.0 637 71.4
Hma1.2p1_0013F.1_g008570 Hydrangea macrophylla HOM05D006900 ORTHO05D008651 3.3e-92 343.6 639 73.1
Nitab4.5_0004979g0030 Nicotiana tabacum HOM05D006900 ORTHO05D008651 4.3e-92 343.2 674 69.0
Cfa015319 Carpinus fangiana HOM05D006900 ORTHO05D008651 2.1e-91 340.9 647 71.1
Actinidia13360 Actinidia chinensis HOM05D006900 ORTHO05D008651 2.8e-91 340.5 585 76.8
Dinv15174 Davidia involucrata HOM05D006900 ORTHO05D008651 3.6e-91 340.1 534 82.0
arahy.Tifrunner.gnm1.ann1.Z0RY6M Arachis hypogaea HOM05D006900 ORTHO05D008651 6.2e-91 339.3 643 71.4
arahy.Tifrunner.gnm1.ann1.88EKIY Arachis hypogaea HOM05D006900 ORTHO05D008651 2.3e-90 337.4 643 71.1
Cc03_g00870 Coffea canephora HOM05D006900 ORTHO05D008651 2.3e-90 337.4 634 74.9
Lj4g0008712 Lotus japonicus HOM05D006900 ORTHO05D008651 3.1e-90 337.0 628 71.5
GSVIVG01034997001 Vitis vinifera HOM05D006900 ORTHO05D008651 5.2e-90 336.3 641 71.0
Haze_01304 Corylus avellana HOM05D006900 ORTHO05D008651 1.5e-89 334.7 630 72.9
Migut.G00056 Erythranthe guttata HOM05D006900 ORTHO05D008651 1.5e-89 334.7 643 71.1
Duzib212G0988 Durio zibethinus HOM05D006900 ORTHO05D008651 2.0e-89 334.3 634 70.3
Atru.chr4.3007 Acer truncatum HOM05D006900 ORTHO05D008651 4.4e-89 333.2 645 70.2
Nitab4.5_0010299g0060 Nicotiana tabacum HOM05D006900 ORTHO05D008651 7.5e-89 332.4 703 52.8
QL06p012004 Quercus lobata HOM05D006900 ORTHO05D008651 9.8e-89 332.0 565 78.4
Thecc.04G300100 Theobroma cacao HOM05D006900 ORTHO05D008651 9.8e-89 332.0 643 70.6
Sabra10G0112000 Salix brachista HOM05D006900 ORTHO05D008651 1.7e-88 331.3 643 69.5
Nn3g21725 Nelumbo nucifera HOM05D006900 ORTHO05D008651 3.7e-88 330.1 661 68.4
Gohir.A10G171600 Gossypium hirsutum HOM05D006900 ORTHO05D008651 4.9e-88 329.7 642 70.6
PGR004G2297 Punica granatum HOM05D006900 ORTHO05D008651 8.3e-88 328.9 562 77.6
MSTRG.10150 Avicennia marina HOM05D006900 ORTHO05D008651 1.4e-87 328.2 622 72.5
Gohir.D10G178700 Gossypium hirsutum HOM05D006900 ORTHO05D008651 1.4e-87 328.2 643 70.6
Gorai.011G199800 Gossypium raimondii HOM05D006900 ORTHO05D008651 1.4e-87 328.2 643 70.6
Rhsim02G0004000 Rhododendron simsii HOM05D006900 ORTHO05D008651 1.9e-87 327.8 687 46.9
CsaV3_3G015170 Cucumis sativus L. HOM05D006900 ORTHO05D008651 5.4e-87 326.2 583 75.1
SGA_v2.0_scaffold104G30080 Striga asiatica HOM05D006900 ORTHO05D008651 7.0e-87 325.9 610 73.1
Eucgr.H04042 Eucalyptus grandis HOM05D006900 ORTHO05D008651 1.6e-86 324.7 576 66.0
COL.COLO4_34620 Corchorus olitorius HOM05D006900 ORTHO05D008651 2.7e-86 323.9 622 71.5
ClCG05G006560 Citrullus lanatus HOM05D006900 ORTHO05D008651 3.5e-86 323.6 587 73.8
Ciclev10004521m.g Citrus clementina HOM05D006900 ORTHO05D008651 1.3e-85 321.6 562 76.0
MELO3C006715.2 Cucumis melo HOM05D006900 ORTHO05D008651 1.7e-85 321.2 588 74.0
THA.LOC104820304 Tarenaya hassleriana HOM05D006900 ORTHO05D008651 3.9e-85 320.1 631 70.2
Psat0s740g0280 Pisum sativum HOM05D006900 ORTHO05D008651 1.5e-84 318.2 560 75.5
Medtr4g122060 Medicago truncatula HOM05D006900 ORTHO05D008651 1.9e-84 317.8 615 71.7
Lalb_Chr07g0182071 Lupinus albus HOM05D006900 ORTHO05D008651 4.3e-84 316.6 607 73.5
TWI09G0824 Tripterygium wilfordii HOM05D006900 ORTHO05D008651 7.3e-84 315.8 625 71.2
BraA05t22092Z Brassica rapa HOM05D006900 ORTHO05D008651 1.6e-83 314.7 573 73.8
Glyma.07G240000 Glycine max HOM05D006900 ORTHO05D008651 1.6e-83 314.7 638 70.7
MBI18_g32026_MAGBIO Magnolia biondii HOM05D006900 ORTHO05D008651 2.1e-83 314.3 532 80.3
A05p32690 Brassica napus HOM05D006900 ORTHO05D008651 2.8e-83 313.9 573 73.8
CARHR092290 Cardamine hirsuta HOM05D006900 ORTHO05D008651 3.6e-83 313.5 592 72.8
BcaC05g28835 Brassica carinata HOM05D006900 ORTHO05D008651 6.2e-83 312.8 574 73.5
C05p49400 Brassica napus HOM05D006900 ORTHO05D008651 6.2e-83 312.8 573 73.6
BolC5t33686H Brassica oleracea HOM05D006900 ORTHO05D008651 6.2e-83 312.8 574 73.5
MD13G1154800 Malus domestica HOM05D006900 ORTHO05D008651 6.2e-83 312.8 624 71.0
Prupe.1G117800 Prunus persica HOM05D006900 ORTHO05D008651 6.2e-83 312.8 615 71.7
BcaB06g25797 Brassica carinata HOM05D006900 ORTHO05D008651 1.1e-82 312.0 585 72.3
unitig_748.g8700 Utricularia gibba HOM05D006900 ORTHO05D008651 1.1e-82 312.0 606 71.3
Glyma.17G033400 Glycine max HOM05D006900 ORTHO05D008651 1.8e-82 311.2 613 72.4
Aqoxy5G02843 Aquilegia oxysepala HOM05D006900 ORTHO05D008651 4.0e-82 310.1 537 77.7
Sp3g15260 Schrenkiella parvula HOM05D006900 ORTHO05D008651 2.0e-81 307.8 597 72.0
Thhalv10020271m.g Eutrema salsugineum HOM05D006900 ORTHO05D008651 2.6e-81 307.4 596 72.5
CiPaw.02G075100 Carya illinoinensis HOM05D006900 ORTHO05D008651 7.5e-81 305.8 595 73.8
AUR62039284 Chenopodium quinoa HOM05D006900 ORTHO05D008651 1.3e-80 305.1 503 81.9
AUR62016204 Chenopodium quinoa HOM05D006900 ORTHO05D008651 2.2e-80 304.3 503 81.9
Aa31LG8G4070 Aethionema arabicum HOM05D006900 ORTHO05D008651 2.9e-80 303.9 610 70.3
AL3G30020 Arabidopsis lyrata HOM05D006900 ORTHO05D008651 2.9e-80 303.9 515 80.0
Carub.0003s1679 Capsella rubella HOM05D006900 ORTHO05D008651 4.9e-80 303.1 590 73.1
PSO170G0176 Papaver somniferum HOM05D006900 ORTHO05D008651 4.9e-80 303.1 654 67.3
VMungo1215G0487 Vigna mungo HOM05D006900 ORTHO05D008651 8.3e-80 302.4 613 72.8
FAN07G1219 Fragaria x ananassa HOM05D006900 ORTHO05D008651 2.4e-79 300.8 615 70.4
FvH4_4g19660 Fragaria vesca HOM05D006900 ORTHO05D008651 5.4e-79 299.7 617 70.8
RcHm_v2.0_Chr4g0425111 Rosa chinensis HOM05D006900 ORTHO05D008651 1.2e-78 298.5 622 71.2
FAN12G3178 Fragaria x ananassa HOM05D006900 ORTHO05D008651 2.1e-78 297.7 614 71.0
PSO357G0537 Papaver somniferum HOM05D006900 ORTHO05D008651 2.1e-78 297.7 638 68.0
Ah.04g156910 Amaranthus hybridus HOM05D006900 ORTHO05D008651 3.5e-78 297.0 583 73.1
Phvul.003G114100 Phaseolus vulgaris HOM05D006900 ORTHO05D008651 6.0e-78 296.2 526 77.6
CANSAT64G2951 Cannabis sativa HOM05D006900 ORTHO05D008651 3.0e-77 293.9 629 69.6
vmacro15184 Vaccinium macrocarpon HOM05D006900 ORTHO05D008651 5.1e-77 293.1 648 68.7
CDE12G0762 Ceratophyllum demersum HOM05D006900 ORTHO05D008651 9.5e-76 288.9 652 66.6
ATR0693G010 Amborella trichopoda HOM05D006900 ORTHO05D008651 6.2e-75 286.2 639 68.5
EL10Ac3g05503 Beta vulgaris HOM05D006900 ORTHO05D008651 1.1e-74 285.4 577 42.1
Sc15g0003210 Simmondsia chinensis HOM05D006900 ORTHO05D008651 2.6e-73 280.8 517 78.5
Sed0008833 Sechium edule HOM05D006900 ORTHO05D008651 2.9e-72 277.3 576 73.4
TPR.G16830 Trifolium pratense HOM05D006900 ORTHO05D008651 2.1e-70 271.2 616 57.5
Zm00001eb014810 Zea mays HOM05D006900 ORTHO05D008651 4.7e-67 260.0 538 74.7
DCAR_030472 Daucus carota HOM05D006900 ORTHO05D008651 6.2e-67 259.6 626 64.4
Hund03124 Selenicereus undatus HOM05D006900 ORTHO05D008651 8.4e-64 249.2 681 60.5
Ca_21442_v3 Cicer arietinum L. HOM05D006900 ORTHO05D008651 1.9e-63 248.1 227 58.1
CDE01G0483 Ceratophyllum demersum HOM05D006900 ORTHO05D008651 2.4e-63 247.7 636 62.6
Hma1.2p1_0013F.1_g008580 Hydrangea macrophylla HOM05D006900 ORTHO05D008651 3.2e-63 247.3 488 74.8
SalBow8G4068 Salvia bowleyana HOM05D006900 ORTHO05D008651 2.7e-62 244.2 232 58.6
AT3G17040 Arabidopsis thaliana HOM05D006900 ORTHO05D008651 6.4e-56 223.0 206 56.3
SEGI_12330 Sequoiadendron giganteum HOM05D006900 ORTHO05D008651 4.9e-48 196.8 499 73.9
Os03g0308800 Oryza sativa ssp. japonica HOM05D006900 ORTHO05D008651 2.4e-47 194.5 144 63.9
Cpa.g.sc9.62 Carica papaya HOM05D006900 ORTHO05D008651 1.0e-37 162.5 174 65.5
CANSAT78G0722 Cannabis sativa HOM05D006900 ORTHO05D008651 1.1e-36 159.1 103 72.8
Mapoly0078s0010 Marchantia polymorpha HOM05D006900 ORTHO05D008651 1.5e-36 158.7 116 63.8
AagrBONN_evm.TU.Sc2ySwM_368.516 Anthoceros agrestis HOM05D006900 ORTHO05D008651 4.5e-33 147.1 110 65.5
Gohir.A10G171900 Gossypium hirsutum HOM05D006900 ORTHO05D008651 1.1e-31 142.5 189 46.0
Pp3c1_20310 Physcomitrium patens HOM05D006900 ORTHO05D008651 3.6e-30 137.5 110 58.2
CBR_g12177 Chara braunii HOM05D006900 ORTHO05D008651 6.7e-29 133.3 143 44.8
SMO115G0152 Selaginella moellendorffii HOM05D006900 ORTHO05D008651 8.7e-29 132.9 110 59.1
CSS0028196 Camellia sinensis var. sinensis HOM05D006900 ORTHO05D008651 8.2e-27 126.3 80 77.5
CSS0035140 Camellia sinensis var. sinensis HOM05D006900 ORTHO05D008651 9.1e-26 122.9 80 75.0
Gohir.A10G171950 Gossypium hirsutum HOM05D006900 ORTHO05D008651 1.3e-24 119.0 91 62.6
Cre09.g416200 Chlamydomonas reinhardtii HOM05D006900 ORTHO05D008651 6.3e-19 100.1 127 41.7
Cpa.g.sc9.61 Carica papaya HOM05D006900 ORTHO05D008651 1.8e-18 98.6 177 41.8
Oeu032012.1 Olea europaea HOM05D006900 ORTHO05D008651 1.8e-18 98.6 87 62.1
MCO01G208 Micromonas commoda HOM05D006900 ORTHO05D008651 3.4e-17 94.4 117 43.6
SGA_v2.0_scaffold157G37400 Striga asiatica HOM05D006900 ORTHO05D008651 3.8e-16 90.9 161 40.4
Oeu032144.1 Olea europaea HOM05D006900 ORTHO05D008651 7.9e-14 83.2 74 91.9
PRCOL_00006040 Prasinoderma coloniale HOM05D001216 ORTHO05D005688 3.3e-12 77.8 112 38.4


User provided reference genes

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