Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0341991 Helianthus annuus HOM05D001849 ORTHO05D004689 2.8e-82 308.5 155 100.0
HanXRQChr09g0277131 Helianthus annuus HOM05D001849 ORTHO05D004689 6.4e-42 174.5 90 92.2
ECA232G2821 Erigeron canadensis HOM05D001849 ORTHO05D004689 4.3e-38 161.8 90 85.6
Hma1.2p1_0229F.1_g096770 Hydrangea macrophylla HOM05D001849 ORTHO05D004689 8.4e-34 147.5 90 75.6
Dinv20408 Davidia involucrata HOM05D001849 ORTHO05D004689 1.1e-33 147.1 90 75.6
Lsat_1_v5_gn_4_91381 Lactuca sativa HOM05D001849 ORTHO05D004689 3.2e-33 145.6 90 76.7
CSS0036951 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 5.4e-33 144.8 90 74.4
CSS0020628 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 7.1e-33 144.4 90 73.3
Migut.D00924 Erythranthe guttata HOM05D001849 ORTHO05D004689 1.0e-31 140.6 90 72.2
Oeu008524.4 Olea europaea HOM05D001849 ORTHO05D004689 1.8e-31 139.8 89 73.0
Cc04_g01040 Coffea canephora HOM05D001849 ORTHO05D004689 3.0e-31 139.0 90 74.4
Lj9C535G6 Lonicera japonica HOM05D001849 ORTHO05D004689 3.9e-31 138.7 90 72.2
vmacro15054 Vaccinium macrocarpon HOM05D001849 ORTHO05D004689 5.1e-31 138.3 90 71.1
Rhsim08G0241300 Rhododendron simsii HOM05D001849 ORTHO05D004689 1.1e-30 137.1 91 69.2
Solyc12g049410.3 Solanum lycopersicum HOM05D001849 ORTHO05D004689 1.5e-30 136.7 90 73.3
Sopen12g023890 Solanum pennellii HOM05D001849 ORTHO05D004689 1.5e-30 136.7 90 73.3
Actinidia32206 Actinidia chinensis HOM05D001849 ORTHO05D004689 1.9e-30 136.3 91 68.1
AUR62001443 Chenopodium quinoa HOM05D001849 ORTHO05D004689 4.3e-30 135.2 90 67.8
EL10Ac7g16444 Beta vulgaris HOM05D001849 ORTHO05D004689 5.6e-30 134.8 90 65.6
Prupe.3G037400 Prunus persica HOM05D001849 ORTHO05D004689 7.4e-30 134.4 90 71.1
Peaxi162Scf00177g00518 Petunia axillaris HOM05D001849 ORTHO05D004689 1.3e-29 133.7 90 71.1
AUR62009922 Chenopodium quinoa HOM05D001849 ORTHO05D004689 1.6e-29 133.3 90 66.7
TAR626G0833 Trochodendron aralioides HOM05D001849 ORTHO05D004689 2.8e-29 132.5 90 67.8
CiPaw.01G216000 Carya illinoinensis HOM05D001849 ORTHO05D004689 4.8e-29 131.7 90 71.1
Hund18672 Selenicereus undatus HOM05D001849 ORTHO05D004689 4.8e-29 131.7 90 66.7
CAN.G1243.9 Capsicum annuum HOM05D001849 ORTHO05D004689 6.2e-29 131.3 90 70.0
Nitab4.5_0004322g0010 Nicotiana tabacum HOM05D001849 ORTHO05D004689 6.2e-29 131.3 90 67.8
SalBow7G1889 Salvia bowleyana HOM05D001849 ORTHO05D004689 6.2e-29 131.3 90 68.9
Nitab4.5_0000189g0010 Nicotiana tabacum HOM05D001849 ORTHO05D004689 1.1e-28 130.6 90 67.8
MBI13_g01700_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004689 1.8e-28 129.8 90 64.4
Cfa003503 Carpinus fangiana HOM05D001849 ORTHO05D004689 2.4e-28 129.4 90 68.9
GSVIVG01016717001 Vitis vinifera HOM05D001849 ORTHO05D004689 2.4e-28 129.4 90 66.7
MD09G1178100 Malus domestica HOM05D001849 ORTHO05D004689 3.1e-28 129.0 90 67.8
MD17G1148600 Malus domestica HOM05D001849 ORTHO05D004689 3.1e-28 129.0 90 65.6
CDE06G0404 Ceratophyllum demersum HOM05D001849 ORTHO05D004689 5.3e-28 128.3 90 63.3
RcHm_v2.0_Chr2g0146431 Rosa chinensis HOM05D001849 ORTHO05D004689 9.0e-28 127.5 90 67.8
CDE07G1134 Ceratophyllum demersum HOM05D001849 ORTHO05D004689 2.6e-27 125.9 90 62.2
QL05p003662 Quercus lobata HOM05D001849 ORTHO05D004689 5.8e-27 124.8 90 67.8
Sed0016273 Sechium edule HOM05D001849 ORTHO05D004689 1.0e-26 124.0 90 64.4
C01p50480 Brassica napus HOM05D001849 ORTHO05D004689 1.3e-26 123.6 90 66.7
BolC1t05000H Brassica oleracea HOM05D001849 ORTHO05D004689 1.3e-26 123.6 90 66.7
DCAR_026423 Daucus carota HOM05D001849 ORTHO05D004689 1.3e-26 123.6 90 65.6
PSO724G1390 Papaver somniferum HOM05D001849 ORTHO05D004689 1.3e-26 123.6 90 66.7
Atru.chr2.1505 Acer truncatum HOM05D001849 ORTHO05D004689 1.7e-26 123.2 90 68.9
Ciclev10027090m.g Citrus clementina HOM05D001849 ORTHO05D004689 1.7e-26 123.2 90 67.8
Eucgr.K02038 Eucalyptus grandis HOM05D001849 ORTHO05D004689 1.7e-26 123.2 90 66.7
Gohir.D09G079550 Gossypium hirsutum HOM05D001849 ORTHO05D004689 1.7e-26 123.2 90 65.6
Gorai.006G094800 Gossypium raimondii HOM05D001849 ORTHO05D004689 1.7e-26 123.2 90 65.6
PGR119G1999 Punica granatum HOM05D001849 ORTHO05D004689 1.7e-26 123.2 90 67.8
Gohir.A09G079900 Gossypium hirsutum HOM05D001849 ORTHO05D004689 2.2e-26 122.9 90 65.6
PSO386G0179 Papaver somniferum HOM05D001849 ORTHO05D004689 2.9e-26 122.5 90 65.6
CsaV3_7G034250 Cucumis sativus L. HOM05D001849 ORTHO05D004689 4.9e-26 121.7 90 63.3
Manes.11G016400 Manihot esculenta HOM05D001849 ORTHO05D004689 6.5e-26 121.3 90 67.8
Duzib235G0671 Durio zibethinus HOM05D001849 ORTHO05D004689 8.4e-26 120.9 90 65.6
FAN02G0489 Fragaria x ananassa HOM05D001849 ORTHO05D004689 8.4e-26 120.9 90 64.4
Lj3g0004011 Lotus japonicus HOM05D001849 ORTHO05D004689 8.4e-26 120.9 89 65.2
A01p39550 Brassica napus HOM05D001849 ORTHO05D004689 1.1e-25 120.6 90 65.6
Carub.0003s1373 Capsella rubella HOM05D001849 ORTHO05D004689 1.1e-25 120.6 90 65.6
CARHR088980 Cardamine hirsuta HOM05D001849 ORTHO05D004689 1.1e-25 120.6 90 65.6
Thhalv10019957m.g Eutrema salsugineum HOM05D001849 ORTHO05D004689 1.1e-25 120.6 90 65.6
FAN09G4066 Fragaria x ananassa HOM05D001849 ORTHO05D004689 1.1e-25 120.6 90 64.4
Sp3g12380 Schrenkiella parvula HOM05D001849 ORTHO05D004689 1.1e-25 120.6 90 65.6
HPP92_022009 Vanilla planifolia HOM05D001849 ORTHO05D004689 1.1e-25 120.6 90 62.2
AT3G14120 Arabidopsis thaliana HOM05D001849 ORTHO05D004689 1.4e-25 120.2 90 65.6
AL3G26350 Arabidopsis lyrata HOM05D001849 ORTHO05D004689 1.9e-25 119.8 90 65.6
A05p35330 Brassica napus HOM05D001849 ORTHO05D004689 1.9e-25 119.8 90 65.6
COL.COLO4_30797 Corchorus olitorius HOM05D001849 ORTHO05D004689 1.9e-25 119.8 90 66.7
Psat4g166880 Pisum sativum HOM05D001849 ORTHO05D004689 1.9e-25 119.8 89 62.9
Sabra01G0127400 Salix brachista HOM05D001849 ORTHO05D004689 1.9e-25 119.8 89 67.4
BraA01t03995Z Brassica rapa HOM05D001849 ORTHO05D004689 2.5e-25 119.4 90 64.4
FvH4_6g35170 Fragaria vesca HOM05D001849 ORTHO05D004689 2.5e-25 119.4 90 63.3
Potri.001G165900 Populus trichocarpa HOM05D001849 ORTHO05D004689 2.5e-25 119.4 88 68.2
Aa31LG8G1350 Aethionema arabicum HOM05D001849 ORTHO05D004689 4.2e-25 118.6 88 65.9
BraA05t22343Z Brassica rapa HOM05D001849 ORTHO05D004689 4.2e-25 118.6 90 64.4
Medtr8g022010 Medicago truncatula HOM05D001849 ORTHO05D004689 4.2e-25 118.6 89 64.0
Aqoxy7G04006 Aquilegia oxysepala HOM05D001849 ORTHO05D004689 5.5e-25 118.2 92 60.9
FAN05G2930 Fragaria x ananassa HOM05D001849 ORTHO05D004689 5.5e-25 118.2 90 64.4
BcaC05g29121 Brassica carinata HOM05D001849 ORTHO05D004689 7.1e-25 117.9 90 64.4
C05p53520 Brassica napus HOM05D001849 ORTHO05D004689 7.1e-25 117.9 90 64.4
BolC5t34029H Brassica oleracea HOM05D001849 ORTHO05D004689 7.1e-25 117.9 90 64.4
Os11g0643700 Oryza sativa ssp. japonica HOM05D001849 ORTHO05D004689 7.1e-25 117.9 89 66.3
THA.LOC104822664 Tarenaya hassleriana HOM05D001849 ORTHO05D004689 7.1e-25 117.9 90 64.4
arahy.Tifrunner.gnm1.ann1.1RN2YG Arachis hypogaea HOM05D001849 ORTHO05D004689 1.2e-24 117.1 88 64.8
arahy.Tifrunner.gnm1.ann1.RMM65D Arachis hypogaea HOM05D001849 ORTHO05D004689 1.2e-24 117.1 88 64.8
Thecc.06G124800 Theobroma cacao HOM05D001849 ORTHO05D004689 2.1e-24 116.3 90 63.3
TPR.G29992 Trifolium pratense HOM05D001849 ORTHO05D004689 2.1e-24 116.3 89 62.9
unitig_578.g16691 Utricularia gibba HOM05D001849 ORTHO05D004689 2.1e-24 116.3 90 60.0
ATR0681G401 Amborella trichopoda HOM05D001849 ORTHO05D004689 4.6e-24 115.2 91 59.3
Duzib192G0006 Durio zibethinus HOM05D001849 ORTHO05D004689 4.6e-24 115.2 89 65.2
Haze_16076 Corylus avellana HOM05D001849 ORTHO05D004689 1.0e-23 114.0 90 64.4
CSS0003623 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 1.8e-23 113.2 90 62.2
CSS0050059 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 1.8e-23 113.2 90 62.2
TWI59G1440 Tripterygium wilfordii HOM05D001849 ORTHO05D004689 3.9e-23 112.1 90 61.1
Zm00001eb165950 Zea mays HOM05D001849 ORTHO05D004689 3.9e-23 112.1 90 64.4
SEGI_21815 Sequoiadendron giganteum HOM05D001849 ORTHO05D004689 5.1e-23 111.7 88 54.5
CANSAT56G0878 Cannabis sativa HOM05D001849 ORTHO05D004689 8.7e-23 110.9 77 68.8
Ca_23412_v3 Cicer arietinum L. HOM05D001849 ORTHO05D004689 1.9e-22 109.8 83 65.1
Glyma.07G042000 Glycine max HOM05D001849 ORTHO05D004689 1.9e-22 109.8 76 68.4
VMungo0331G1611 Vigna mungo HOM05D001849 ORTHO05D004689 1.9e-22 109.8 76 68.4
Lalb_Chr10g0101321 Lupinus albus HOM05D001849 ORTHO05D004689 7.4e-22 107.8 76 68.4
Phvul.010G127100 Phaseolus vulgaris HOM05D001849 ORTHO05D004689 9.6e-22 107.5 76 67.1
ClCG09G001140 Citrullus lanatus HOM05D001849 ORTHO05D004689 1.6e-21 106.7 90 58.9
MELO3C024334.2 Cucumis melo HOM05D001849 ORTHO05D004689 1.6e-21 106.7 90 58.9
FAN14G1459 Fragaria x ananassa HOM05D001849 ORTHO05D004689 2.1e-21 106.3 113 50.4
SGA_v2.0_scaffold4G02078 Striga asiatica HOM05D001849 ORTHO05D004689 2.8e-21 105.9 90 58.9
AagrBONN_evm.TU.Sc2ySwM_362.2383 Anthoceros agrestis HOM05D001849 ORTHO05D004689 6.2e-21 104.8 88 52.3
SHI25232 Sapria himalayana HOM05D001849 ORTHO05D004689 3.4e-19 99.0 90 54.4
Pp3c8_15880 Physcomitrium patens HOM05D001849 ORTHO05D004689 5.0e-18 95.1 89 51.7
Mapoly0024s0112 Marchantia polymorpha HOM05D001849 ORTHO05D004689 1.9e-17 93.2 88 44.3
CSS0019722 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 3.5e-16 89.0 67 62.7
Cpa.g.sc169.27 Carica papaya HOM05D001849 ORTHO05D004689 2.2e-13 79.7 65 60.0
SMO304G0023 Selaginella moellendorffii HOM05D001849 ORTHO05D004689 5.3e-12 75.1 88 38.6
Zm00001eb307710 Zea mays HOM05D001849 ORTHO05D004689 1.5e-11 73.6 76 53.9
CSS0047517 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 1.4e-09 67.0 56 58.9
Hma1.2p1_0229F.1_g096760 Hydrangea macrophylla HOM05D001849 ORTHO05D004689 2.0e-06 56.6 31 80.6


User provided reference genes

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