Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0326591 Helianthus annuus HOM05D000216 ORTHO05D001131 1.9e-113 412.5 208 100.0
HanXRQCPg0579801 Helianthus annuus HOM05D000216 ORTHO05D001131 2.5e-113 412.1 207 100.0
Lsat_1_v5_gn_1_118620 Lactuca sativa HOM05D000216 ORTHO05D001131 2.5e-110 402.1 207 97.1
Lsat_1_v5_gn_1_92840 Lactuca sativa HOM05D000216 ORTHO05D001131 2.5e-110 402.1 207 97.1
HanXRQChr00c0165g0572161 Helianthus annuus HOM05D000216 ORTHO05D001131 7.6e-107 390.6 200 99.5
PGR111G0080 Punica granatum HOM05D000216 ORTHO05D001131 5.7e-94 347.8 207 84.1
Potri.013G142232 Populus trichocarpa HOM05D000216 ORTHO05D001131 1.7e-93 346.3 207 83.6
SabraPtG0001100 Salix brachista HOM05D000216 ORTHO05D001131 1.7e-93 346.3 207 83.1
CAN.G1738.7 Capsicum annuum HOM05D000216 ORTHO05D001131 6.3e-93 344.4 207 83.1
CAN.G892.2 Capsicum annuum HOM05D000216 ORTHO05D001131 6.3e-93 344.4 207 83.1
Sed0007596 Sechium edule HOM05D000216 ORTHO05D001131 8.2e-93 344.0 207 83.1
EL10As12g24016 Beta vulgaris HOM05D000216 ORTHO05D001131 1.1e-92 343.6 207 83.1
EL10As4g23395 Beta vulgaris HOM05D000216 ORTHO05D001131 1.1e-92 343.6 207 83.1
CsaV3_UNG208330 Cucumis sativus L. HOM05D000216 ORTHO05D001131 1.1e-92 343.6 207 83.1
Ah.01g011550 Amaranthus hybridus HOM05D000216 ORTHO05D001131 1.8e-92 342.8 207 82.6
Ah.09g227320 Amaranthus hybridus HOM05D000216 ORTHO05D001131 1.8e-92 342.8 207 82.6
Ah.10g027590 Amaranthus hybridus HOM05D000216 ORTHO05D001131 1.8e-92 342.8 207 82.6
LjContig00489g0016354 Lotus japonicus HOM05D000216 ORTHO05D001131 1.8e-92 342.8 207 82.6
DCAR_032476 Daucus carota HOM05D000216 ORTHO05D001131 5.3e-92 341.3 207 81.6
HanXRQChr11g0340031 Helianthus annuus HOM05D000216 ORTHO05D001131 5.3e-92 341.3 206 86.4
RcHm_v2.0_CPg0502401 Rosa chinensis HOM05D000216 ORTHO05D001131 7.0e-92 340.9 207 83.1
arahy.Tifrunner.gnm1.ann1.MIWC4Y Arachis hypogaea HOM05D000216 ORTHO05D001131 9.1e-92 340.5 207 82.1
LjContig00318g0016482 Lotus japonicus HOM05D000216 ORTHO05D001131 2.0e-91 339.3 207 81.6
PSO548G0026 Papaver somniferum HOM05D000216 ORTHO05D001131 7.7e-91 337.4 207 82.1
CARHR281930 Cardamine hirsuta HOM05D000216 ORTHO05D001131 1.0e-90 337.0 206 82.5
Nn082s42674 Nelumbo nucifera HOM05D000216 ORTHO05D001131 1.7e-90 336.3 207 81.6
ATCG00190 Arabidopsis thaliana HOM05D000216 ORTHO05D001131 2.2e-90 335.9 206 82.0
Gohir.D01G029500 Gossypium hirsutum HOM05D000216 ORTHO05D001131 2.9e-90 335.5 207 81.2
Lalb_Chr09g0335411 Lupinus albus HOM05D000216 ORTHO05D001131 3.8e-90 335.1 207 80.2
Psat0s6357g0040 Pisum sativum HOM05D000216 ORTHO05D001131 8.5e-90 334.0 207 79.7
Psat3g186440 Pisum sativum HOM05D000216 ORTHO05D001131 8.5e-90 334.0 207 79.7
BNapus_Darmor_BZH_scaffold_253p00080 Brassica napus HOM05D000216 ORTHO05D001131 1.9e-89 332.8 206 81.1
BraSC140t45600Z Brassica rapa HOM05D000216 ORTHO05D001131 1.9e-89 332.8 206 81.1
BraSC140t45606Z Brassica rapa HOM05D000216 ORTHO05D001131 1.9e-89 332.8 206 81.1
BraSC151t45705Z Brassica rapa HOM05D000216 ORTHO05D001131 1.9e-89 332.8 206 81.1
BraSC58t46479Z Brassica rapa HOM05D000216 ORTHO05D001131 1.9e-89 332.8 206 81.1
BolSC45t60940H Brassica oleracea HOM05D000216 ORTHO05D001131 2.5e-89 332.4 206 80.6
Sc15g0001760 Simmondsia chinensis HOM05D000216 ORTHO05D001131 4.2e-89 331.6 207 81.6
Sc25g0001960 Simmondsia chinensis HOM05D000216 ORTHO05D001131 4.2e-89 331.6 207 81.6
Hund08566 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-89 331.3 207 79.2
Hund18042 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-89 331.3 207 79.2
Hund19314 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-89 331.3 207 79.2
Hund23975 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-89 331.3 207 79.2
Hund25935 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-89 331.3 207 79.2
Hund27452 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-89 331.3 207 79.2
Hund27562 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-89 331.3 207 79.2
Hund27608 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-89 331.3 207 79.2
Hund27642 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-89 331.3 207 79.2
Hund27656 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-89 331.3 207 79.2
Hund27670 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-89 331.3 207 79.2
Hund27699 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-89 331.3 207 79.2
Hund27744 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-89 331.3 207 79.2
Hund27763 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-89 331.3 207 79.2
Hund27805 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-89 331.3 207 79.2
Hund27822 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-89 331.3 207 79.2
Hund27840 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-89 331.3 207 79.2
Hund27867 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-89 331.3 207 79.2
Hund27916 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-89 331.3 207 79.2
Hund27998 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-89 331.3 207 79.2
Hund28018 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-89 331.3 207 79.2
Hund28026 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-89 331.3 207 79.2
Hund28058 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-89 331.3 207 79.2
Hund28085 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-89 331.3 207 79.2
Hund28123 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-89 331.3 207 79.2
Hund28131 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-89 331.3 207 79.2
Hund28139 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-89 331.3 207 79.2
Hund28163 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-89 331.3 207 79.2
Hund28189 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-89 331.3 207 79.2
Hund28208 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-89 331.3 207 79.2
Hund28237 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-89 331.3 207 79.2
Hund28247 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-89 331.3 207 79.2
Hund28260 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-89 331.3 207 79.2
Hund28336 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-89 331.3 207 79.2
Hund28351 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-89 331.3 207 79.2
Hund28353 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-89 331.3 207 79.2
Hund28385 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-89 331.3 207 79.2
Hund28398 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-89 331.3 207 79.2
Hund28500 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-89 331.3 207 79.2
Hund28578 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-89 331.3 207 79.2
Hund28618 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-89 331.3 207 79.2
Hund28642 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-89 331.3 207 79.2
Hund28686 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-89 331.3 207 79.2
Hund28697 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-89 331.3 207 79.2
Hund28702 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-89 331.3 207 79.2
Hund28806 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-89 331.3 207 79.2
Hund28824 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-89 331.3 207 79.2
Hund28904 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-89 331.3 207 79.2
Hund28914 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-89 331.3 207 79.2
Hund28984 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-89 331.3 207 79.2
Hund29113 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-89 331.3 207 79.2
Hund29197 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-89 331.3 207 79.2
Hund29207 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-89 331.3 207 79.2
Hund29354 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-89 331.3 207 79.2
Hund29389 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-89 331.3 207 79.2
Hund29478 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-89 331.3 207 79.2
Hund29486 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-89 331.3 207 79.2
Hund29645 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-89 331.3 207 79.2
Hund29745 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-89 331.3 207 79.2
Hund30018 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-89 331.3 207 79.2
Hund30063 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-89 331.3 207 79.2
unitig_91.g26498 Utricularia gibba HOM05D000216 ORTHO05D001131 1.6e-88 329.7 207 79.2
Hund28835 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.7e-88 328.9 207 78.7
Hund28154 Selenicereus undatus HOM05D000216 ORTHO05D001131 8.0e-88 327.4 207 78.3
Hund28555 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.0e-83 312.8 196 79.1
Medtr4g051130 Medicago truncatula HOM05D000216 ORTHO05D001131 1.9e-81 306.2 192 80.7
Medtr0002s0510 Medicago truncatula HOM05D000216 ORTHO05D001131 2.1e-80 302.8 207 73.9
Hund27928 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.0e-79 300.4 192 78.1
Hund27944 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.4e-79 300.1 191 78.5
Hund28292 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.4e-79 300.1 191 78.5
Hund28372 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.4e-79 300.1 191 78.5
Sed0002232 Sechium edule HOM05D000216 ORTHO05D001131 3.0e-79 298.9 182 83.0
Hund28715 Selenicereus undatus HOM05D000216 ORTHO05D001131 3.0e-79 298.9 191 78.0
Hund28280 Selenicereus undatus HOM05D000216 ORTHO05D001131 3.3e-78 295.4 188 78.7
Medtr5g005060 Medicago truncatula HOM05D000216 ORTHO05D001131 4.1e-76 288.5 207 70.0
Peaxi162Scf00608g00014 Petunia axillaris HOM05D000216 ORTHO05D001131 1.5e-73 280.0 167 83.8
C04p22650 Brassica napus HOM05D000216 ORTHO05D001131 2.6e-70 269.2 172 79.1
BolSC37t60764H Brassica oleracea HOM05D000216 ORTHO05D001131 3.4e-70 268.9 172 78.5
BolC7t41731H Brassica oleracea HOM05D000216 ORTHO05D001131 2.0e-67 259.6 172 77.3
Psat0s6638g0160 Pisum sativum HOM05D000216 ORTHO05D001131 1.3e-61 240.4 153 77.1
BolSC45t60873H Brassica oleracea HOM05D000216 ORTHO05D001131 1.7e-61 240.0 153 77.8
arahy.Tifrunner.gnm1.ann1.Q51NGA Arachis hypogaea HOM05D000216 ORTHO05D001131 9.2e-60 234.2 162 75.3
Psat0s5655g0160 Pisum sativum HOM05D000216 ORTHO05D001131 1.3e-58 230.3 221 57.5
Migut.H02461 Erythranthe guttata HOM05D000216 ORTHO05D001131 2.9e-58 229.2 167 71.3
Migut.D01417 Erythranthe guttata HOM05D000216 ORTHO05D001131 8.3e-53 211.1 172 68.0
AL2G20930 Arabidopsis lyrata HOM05D000216 ORTHO05D001131 6.0e-51 204.9 120 84.2
Gohir.D02G042933 Gossypium hirsutum HOM05D000216 ORTHO05D001131 1.0e-50 204.1 132 77.3
BolSC49t61196H Brassica oleracea HOM05D000216 ORTHO05D001131 5.0e-50 201.8 120 81.7
CAN.G219.20 Capsicum annuum HOM05D000216 ORTHO05D001131 5.0e-50 201.8 120 82.5
CAN.G939.17 Capsicum annuum HOM05D000216 ORTHO05D001131 5.0e-50 201.8 120 82.5
Lj2C1237G9 Lonicera japonica HOM05D000216 ORTHO05D001131 1.8e-47 193.4 120 80.0
Psat7g199200 Pisum sativum HOM05D000216 ORTHO05D001131 1.9e-44 183.3 107 83.2
VMungo1015G0001 Vigna mungo HOM05D000216 ORTHO05D001131 2.4e-44 183.0 107 84.1
GSVIVG01035251001 Vitis vinifera HOM05D000216 ORTHO05D001131 3.5e-43 179.1 125 73.6
Migut.D01344 Erythranthe guttata HOM05D000216 ORTHO05D001131 5.1e-42 175.3 207 50.2
CAN.G1648.7 Capsicum annuum HOM05D000216 ORTHO05D001131 1.9e-41 173.3 103 84.5
Gohir.D12G085301 Gossypium hirsutum HOM05D000216 ORTHO05D001131 2.5e-41 172.9 108 80.6
Sed0025233 Sechium edule HOM05D000216 ORTHO05D001131 1.6e-40 170.2 104 81.7
CAN.G100.43 Capsicum annuum HOM05D000216 ORTHO05D001131 2.1e-40 169.9 107 79.4
Gorai.008G095600 Gossypium raimondii HOM05D000216 ORTHO05D001131 3.6e-40 169.1 108 77.8
Gorai.011G273200 Gossypium raimondii HOM05D000216 ORTHO05D001131 9.2e-36 154.5 99 79.8
Gohir.D05G027450 Gossypium hirsutum HOM05D000216 ORTHO05D001131 1.2e-35 154.1 88 85.2
Nitab4.5_0001715g0110 Nicotiana tabacum HOM05D000216 ORTHO05D001131 1.6e-35 153.7 155 57.4
SMO086G0059 Selaginella moellendorffii HOM05D000216 ORTHO05D001131 6.0e-35 151.8 196 42.9
SMO161G0001 Selaginella moellendorffii HOM05D000216 ORTHO05D001131 6.0e-35 151.8 196 42.9
SMO168G0001 Selaginella moellendorffii HOM05D000216 ORTHO05D001131 6.0e-35 151.8 196 42.9
SMO299G0001 Selaginella moellendorffii HOM05D000216 ORTHO05D001131 6.0e-35 151.8 196 42.9
SMO237G0001 Selaginella moellendorffii HOM05D000216 ORTHO05D001131 1.7e-34 150.2 193 43.0
Gorai.009G027600 Gossypium raimondii HOM05D000216 ORTHO05D001131 3.9e-34 149.1 88 83.0
Eucgr.E02520 Eucalyptus grandis HOM05D000216 ORTHO05D001131 3.1e-31 139.4 102 69.6
BraSC58t46409Z Brassica rapa HOM05D000216 ORTHO05D001131 8.9e-31 137.9 80 83.8
Psat4g147960 Pisum sativum HOM05D000216 ORTHO05D001131 4.4e-30 135.6 81 84.0
SMO113G0001 Selaginella moellendorffii HOM05D000216 ORTHO05D001131 1.2e-27 127.5 149 45.0
Eucgr.C02946 Eucalyptus grandis HOM05D000216 ORTHO05D001131 3.5e-27 125.9 70 87.1
Gohir.A04G053721 Gossypium hirsutum HOM05D000216 ORTHO05D001131 7.8e-27 124.8 79 78.5
Gorai.005G236000 Gossypium raimondii HOM05D000216 ORTHO05D001131 2.3e-26 123.2 79 77.2
VMungo0647G1325 Vigna mungo HOM05D000216 ORTHO05D001131 3.0e-26 122.9 81 76.5
TPR.G32479 Trifolium pratense HOM05D000216 ORTHO05D001131 1.1e-25 120.9 76 73.7
Solyc10g017920.1 Solanum lycopersicum HOM05D000216 ORTHO05D001131 2.1e-24 116.7 75 77.3
Solyc02g067590.2 Solanum lycopersicum HOM05D000216 ORTHO05D001131 2.8e-24 116.3 73 78.1
Gohir.A01G160850 Gossypium hirsutum HOM05D000216 ORTHO05D001131 4.0e-23 112.5 94 60.6
Gorai.002G188200 Gossypium raimondii HOM05D000216 ORTHO05D001131 4.0e-23 112.5 99 60.6
Mapoly0019s0087 Marchantia polymorpha HOM05D000216 ORTHO05D001131 4.0e-23 112.5 155 41.3
Eucgr.B02475 Eucalyptus grandis HOM05D000216 ORTHO05D001131 2.0e-22 110.2 89 69.7
BolSC46t60987H Brassica oleracea HOM05D000216 ORTHO05D001131 4.4e-22 109.0 88 65.9
ClCG07G004170 Citrullus lanatus HOM05D000216 ORTHO05D001131 2.2e-21 106.7 73 75.3
Gorai.005G047300 Gossypium raimondii HOM05D000216 ORTHO05D001131 2.4e-20 103.2 61 80.3
Gohir.D01G151850 Gossypium hirsutum HOM05D000216 ORTHO05D001131 2.3e-18 96.7 87 60.9
CSS0046430 Camellia sinensis var. sinensis HOM05D000216 ORTHO05D001131 3.0e-18 96.3 76 67.1
Gorai.007G168000 Gossypium raimondii HOM05D000216 ORTHO05D001131 5.1e-18 95.5 67 71.6
ClCG01G011250 Citrullus lanatus HOM05D000216 ORTHO05D001131 8.7e-18 94.7 82 63.4
BraSC25t45880Z Brassica rapa HOM05D000216 ORTHO05D001131 2.8e-16 89.7 72 66.7
Thecc.07G188500 Theobroma cacao HOM05D000216 ORTHO05D001131 3.6e-16 89.4 52 80.8
Solyc04g026310.1 Solanum lycopersicum HOM05D000216 ORTHO05D001131 3.5e-11 72.8 46 71.7
Hma1.2p1_0094F.1_g047108 Hydrangea macrophylla HOM05D000216 ORTHO05D001131 2.3e-10 70.1 40 82.5
Solyc12g035950.1 Solanum lycopersicum HOM05D000216 ORTHO05D001131 3.0e-10 69.7 51 70.6
Haze_26635 Corylus avellana HOM05D000216 ORTHO05D001131 1.1e-09 67.8 98 33.7
Migut.E00860 Erythranthe guttata HOM05D000216 ORTHO05D001131 1.5e-09 67.4 33 90.9
EL10Ac1g01787 Beta vulgaris HOM05D000216 ORTHO05D001131 9.6e-09 64.7 107 40.2
BolSC44t60850H Brassica oleracea HOM05D000216 ORTHO05D001131 2.8e-08 63.2 33 84.8
CAN.G1243.1 Capsicum annuum HOM05D000216 ORTHO05D001131 1.1e-07 61.2 37 81.1
Gorai.008G086500 Gossypium raimondii HOM05D000216 ORTHO05D001131 9.9e-06 54.7 34 79.4
Nitab4.5_0000095g0040 Nicotiana tabacum HOM05D000216 ORTHO05D001131 9.9e-06 54.7 28 82.1


User provided reference genes

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