Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr07g0188191 Helianthus annuus HOM05D000104 ORTHO05D017166 3.3e-127 458.4 228 100.0
HanXRQChr01g0030671 Helianthus annuus HOM05D000104 ORTHO05D003467 4.7e-57 225.3 139 85.6
HanXRQChr11g0353801 Helianthus annuus HOM05D000104 ORTHO05D003467 5.2e-40 168.7 140 65.7
ECA248G2891 Erigeron canadensis HOM05D000104 ORTHO05D003467 5.0e-35 152.1 143 58.7
Lsat_1_v5_gn_1_42900 Lactuca sativa HOM05D000104 ORTHO05D003467 2.1e-25 120.2 141 53.9
Rhsim07G0163100 Rhododendron simsii HOM05D000104 ORTHO05D003467 2.2e-22 110.2 124 46.8
Lj7A730T43 Lonicera japonica HOM05D000104 ORTHO05D003467 1.2e-20 104.4 149 42.3
Dinv16472 Davidia involucrata HOM05D000104 ORTHO05D003467 2.0e-20 103.6 141 41.8
CSS0003293 Camellia sinensis var. sinensis HOM05D000104 ORTHO05D003467 6.0e-20 102.1 130 43.1
vmacro05141 Vaccinium macrocarpon HOM05D000104 ORTHO05D003467 2.3e-19 100.1 144 40.3
CSS0032982 Camellia sinensis var. sinensis HOM05D000104 ORTHO05D003467 3.0e-19 99.8 118 49.2
Actinidia13201 Actinidia chinensis HOM05D000104 ORTHO05D017166 2.5e-18 96.7 74 59.5
GSVIVG01035901001 Vitis vinifera HOM05D000104 ORTHO05D003467 4.3e-18 95.9 105 47.6
Hma1.2p1_0392F.1_g143010 Hydrangea macrophylla HOM05D000104 ORTHO05D003467 9.5e-18 94.7 111 46.8
TAR625G0155 Trochodendron aralioides HOM05D000104 ORTHO05D003467 1.8e-16 90.5 96 50.0
Nn2g12306 Nelumbo nucifera HOM05D000104 ORTHO05D003467 2.3e-16 90.1 103 42.7
Eucgr.G00556 Eucalyptus grandis HOM05D000104 ORTHO05D003467 3.1e-16 89.7 137 38.0
Sabra18G0023400 Salix brachista HOM05D000104 ORTHO05D003467 2.0e-15 87.0 72 52.8
Potri.018G021100 Populus trichocarpa HOM05D000104 ORTHO05D003467 2.6e-15 86.7 72 52.8
vmacro11232 Vaccinium macrocarpon HOM05D000104 ORTHO05D003467 3.4e-15 86.3 103 45.6
Atru.chr7.2523 Acer truncatum HOM05D000104 ORTHO05D017166 5.8e-15 85.5 80 50.0
Potri.006G262200 Populus trichocarpa HOM05D000104 ORTHO05D003467 5.8e-15 85.5 91 42.9
PGR044G1954 Punica granatum HOM05D000104 ORTHO05D003467 5.8e-15 85.5 135 38.5
Oeu012636.1 Olea europaea HOM05D000104 ORTHO05D003467 1.3e-14 84.3 124 40.3
Sabra06G0204500 Salix brachista HOM05D000104 ORTHO05D003467 3.7e-14 82.8 103 41.7
TWI32G0850 Tripterygium wilfordii HOM05D000104 ORTHO05D003467 6.4e-14 82.0 112 42.0
Rhsim02G0208200 Rhododendron simsii HOM05D000104 ORTHO05D003467 8.3e-14 81.6 147 36.1
Manes.03G010400 Manihot esculenta HOM05D000104 ORTHO05D003467 1.4e-13 80.9 90 43.3
SEGI_33990 Sequoiadendron giganteum HOM05D000104 ORTHO05D003467 2.4e-13 80.1 138 34.8
TWI63G1656 Tripterygium wilfordii HOM05D000104 ORTHO05D003467 3.2e-13 79.7 131 38.2
VMungo1127G1155 Vigna mungo HOM05D037023 ORTHO05D017166 5.4e-13 79.0 117 38.5
Oeu056768.1 Olea europaea HOM05D000104 ORTHO05D003467 7.1e-13 78.6 111 40.5
Psat5g031880 Pisum sativum HOM05D000104 ORTHO05D003467 9.2e-13 78.2 124 37.1
ATR1153G016 Amborella trichopoda HOM05D000104 ORTHO05D003467 1.2e-12 77.8 115 40.0
Phvul.009G088700 Phaseolus vulgaris HOM05D000104 ORTHO05D003467 1.2e-12 77.8 109 43.1
VMungo1309G2115 Vigna mungo HOM05D000104 ORTHO05D003467 1.2e-12 77.8 109 44.0
CiPaw.08G007100 Carya illinoinensis HOM05D000104 ORTHO05D003467 4.6e-12 75.9 102 41.2
Nitab4.5_0002503g0110 Nicotiana tabacum HOM05D000104 ORTHO05D003467 7.8e-12 75.1 70 48.6
Nitab4.5_0003811g0020 Nicotiana tabacum HOM05D000104 ORTHO05D003467 1.7e-11 73.9 70 48.6
QL02p019684 Quercus lobata HOM05D000104 ORTHO05D003467 1.7e-11 73.9 130 36.2
Glyma.04G062400 Glycine max HOM05D000104 ORTHO05D003467 2.3e-11 73.6 94 42.6
Ciclev10010331m.g Citrus clementina HOM05D000104 ORTHO05D003467 3.0e-11 73.2 101 39.6
Glyma.06G063400 Glycine max HOM05D000104 ORTHO05D003467 3.9e-11 72.8 94 41.5
Haze_21436 Corylus avellana HOM05D000104 ORTHO05D003467 5.1e-11 72.4 94 39.4
Sed0013682 Sechium edule HOM05D000104 ORTHO05D003467 5.1e-11 72.4 102 40.2
Rhsim02G0208100 Rhododendron simsii HOM05D000001 ORTHO05D009891 8.6e-11 71.6 95 42.1
Cc08_g00060 Coffea canephora HOM05D000104 ORTHO05D003467 1.1e-10 71.2 104 42.3
MELO3C016973.2 Cucumis melo HOM05D000104 ORTHO05D003467 4.3e-10 69.3 132 37.1
Lalb_Chr08g0244361 Lupinus albus HOM05D000104 ORTHO05D003467 4.3e-10 69.3 77 42.9
MSTRG.11592 Avicennia marina HOM05D000104 ORTHO05D003467 7.3e-10 68.6 103 42.7
ClCG05G016460 Citrullus lanatus HOM05D000104 ORTHO05D003467 7.3e-10 68.6 116 37.9
PSO339G0671 Papaver somniferum HOM05D000104 ORTHO05D003467 7.3e-10 68.6 97 37.1
VMungo1383G0634 Vigna mungo HOM05D037023 ORTHO05D017166 9.5e-10 68.2 86 41.9
DCAR_007677 Daucus carota HOM05D000104 ORTHO05D003467 1.2e-09 67.8 71 40.8
THA.LOC104803635 Tarenaya hassleriana HOM05D000104 ORTHO05D003467 1.2e-09 67.8 82 40.2
PSO384G0886 Papaver somniferum HOM05D000104 ORTHO05D003467 2.1e-09 67.0 97 37.1
TPR.G3131 Trifolium pratense HOM05D000104 ORTHO05D003467 2.1e-09 67.0 98 37.8
Ca_13055_v3 Cicer arietinum L. HOM05D000104 ORTHO05D003467 2.8e-09 66.6 102 35.3
COL.COLO4_18936 Corchorus olitorius HOM05D000104 ORTHO05D003467 3.6e-09 66.2 126 35.7
Aa31sc100G10 Aethionema arabicum HOM05D000104 ORTHO05D003467 4.7e-09 65.9 71 42.3
Sed0022321 Sechium edule HOM05D000104 ORTHO05D003467 4.7e-09 65.9 134 33.6
VMungo0720G0250 Vigna mungo HOM05D003344 ORTHO05D003981 4.7e-09 65.9 88 43.2
Lalb_Chr24g0402041 Lupinus albus HOM05D000104 ORTHO05D003467 6.2e-09 65.5 94 36.2
Manes.16G127700 Manihot esculenta HOM05D000104 ORTHO05D003467 6.2e-09 65.5 71 43.7
Lalb_Chr23g0268291 Lupinus albus HOM05D000104 ORTHO05D003467 1.1e-08 64.7 74 39.2
BcaB08g35151 Brassica carinata HOM05D000104 ORTHO05D003467 1.4e-08 64.3 85 38.8
Lj1g0020904 Lotus japonicus HOM05D000104 ORTHO05D003467 1.4e-08 64.3 103 36.9
Medtr3g106210 Medicago truncatula HOM05D000104 ORTHO05D003467 1.4e-08 64.3 115 32.2
arahy.Tifrunner.gnm1.ann1.QU94QB Arachis hypogaea HOM05D000104 ORTHO05D003467 1.8e-08 63.9 72 43.1
AagrBONN_evm.TU.Sc2ySwM_344.1528 Anthoceros agrestis HOM05D000104 ORTHO05D003467 2.3e-08 63.5 75 40.0
Mapoly0010s0012 Marchantia polymorpha HOM05D000104 ORTHO05D003467 2.3e-08 63.5 67 43.3
CAN.G199.65 Capsicum annuum HOM05D000104 ORTHO05D003467 4.0e-08 62.8 102 37.3
CsaV3_4G036700 Cucumis sativus L. HOM05D000104 ORTHO05D003467 4.0e-08 62.8 142 35.2
Sp4g04150 Schrenkiella parvula HOM05D000104 ORTHO05D003467 5.2e-08 62.4 112 31.2
Oeu000761.1 Olea europaea HOM05D000104 ORTHO05D017166 6.8e-08 62.0 77 40.3
THA.LOC104803854 Tarenaya hassleriana HOM05D000104 ORTHO05D003467 8.9e-08 61.6 81 38.3
VMungo1215G0912 Vigna mungo HOM05D037023 ORTHO05D017166 8.9e-08 61.6 86 41.9
Sopen06g024260 Solanum pennellii HOM05D000104 ORTHO05D003467 1.2e-07 61.2 102 37.3
Gohir.D13G187950 Gossypium hirsutum HOM05D000104 ORTHO05D017166 1.5e-07 60.8 102 38.2
Gorai.010G244100 Gossypium raimondii HOM05D000104 ORTHO05D003467 2.0e-07 60.5 143 33.6
Gohir.A13G179800 Gossypium hirsutum HOM05D000104 ORTHO05D003467 2.6e-07 60.1 135 34.1
Thhalv10000014m.g Eutrema salsugineum HOM05D000104 ORTHO05D003467 3.4e-07 59.7 74 36.5
Aqoxy2G02630 Aquilegia oxysepala HOM05D000104 ORTHO05D003467 4.4e-07 59.3 71 42.3
BcaC07g40886 Brassica carinata HOM05D000104 ORTHO05D003467 4.4e-07 59.3 81 34.6
A09p55830 Brassica napus HOM05D000104 ORTHO05D003467 4.4e-07 59.3 79 35.4
C08p38830 Brassica napus HOM05D000104 ORTHO05D003467 4.4e-07 59.3 96 35.4
BolC8t51453H Brassica oleracea HOM05D000104 ORTHO05D003467 4.4e-07 59.3 81 34.6
Peaxi162Scf00430g00415 Petunia axillaris HOM05D000104 ORTHO05D003467 9.9e-07 58.2 64 42.2
AT2G25170 Arabidopsis thaliana HOM05D000104 ORTHO05D003467 1.3e-06 57.8 113 31.9
Migut.A00006 Erythranthe guttata HOM05D000104 ORTHO05D003467 1.3e-06 57.8 75 40.0
Sp7g29720 Schrenkiella parvula HOM05D000104 ORTHO05D003467 1.3e-06 57.8 76 36.8
Duzib150G0247 Durio zibethinus HOM05D000104 ORTHO05D003467 2.2e-06 57.0 94 41.5
Psat6g027200 Pisum sativum HOM05D000104 ORTHO05D003467 2.2e-06 57.0 95 32.6
AL4G16380 Arabidopsis lyrata HOM05D000104 ORTHO05D003467 3.7e-06 56.2 113 31.0
BraA09t40986Z Brassica rapa HOM05D000104 ORTHO05D003467 3.7e-06 56.2 80 36.2
Ca_15766_v3 Cicer arietinum L. HOM05D000104 ORTHO05D003467 4.9e-06 55.8 97 34.0
Gohir.D07G035100 Gossypium hirsutum HOM05D000104 ORTHO05D003467 6.4e-06 55.5 129 34.1
Thecc.09G017400 Theobroma cacao HOM05D000104 ORTHO05D003467 6.4e-06 55.5 144 31.2


User provided reference genes

Program Settings