Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr04g0115551 Helianthus annuus HOM05D002606 ORTHO05D003016 2.1e-222 775.4 395 100.0
ECA236G2241 Erigeron canadensis HOM05D002606 ORTHO05D003016 7.7e-108 394.8 450 53.3
HanXRQChr13g0408621 Helianthus annuus HOM05D002606 ORTHO05D003016 6.7e-104 381.7 230 87.8
CSS0035276 Camellia sinensis var. sinensis HOM05D002606 ORTHO05D003016 1.5e-66 257.7 444 40.8
Lj1A1180T81 Lonicera japonica HOM05D002606 ORTHO05D003016 6.4e-62 242.3 441 40.8
Thecc.06G159700 Theobroma cacao HOM05D002606 ORTHO05D003016 8.3e-62 241.9 393 42.7
SGA_v2.0_scaffold1G00119 Striga asiatica HOM05D002606 ORTHO05D003016 3.0e-59 233.4 417 40.5
Actinidia19476 Actinidia chinensis HOM05D002606 ORTHO05D003016 5.1e-59 232.6 440 41.8
Duzib235G0230 Durio zibethinus HOM05D002606 ORTHO05D003016 1.1e-56 224.9 407 39.8
CiPaw.09G132100 Carya illinoinensis HOM05D002606 ORTHO05D003016 5.2e-56 222.6 364 42.6
QL05p052775 Quercus lobata HOM05D002606 ORTHO05D003016 5.2e-56 222.6 434 38.7
Nn3g20963 Nelumbo nucifera HOM05D002606 ORTHO05D003016 6.8e-56 222.2 404 39.1
Aqoxy4G00175 Aquilegia oxysepala HOM05D002606 ORTHO05D003016 2.0e-55 220.7 395 39.7
Cc09_g09990 Coffea canephora HOM05D002606 ORTHO05D003016 2.0e-55 220.7 465 37.0
TWI09G1585 Tripterygium wilfordii HOM05D002606 ORTHO05D003016 3.4e-55 219.9 404 38.6
Oeu001059.1 Olea europaea HOM05D002606 ORTHO05D003016 4.9e-54 216.1 452 38.1
CAN.G257.100 Capsicum annuum HOM05D002606 ORTHO05D003016 1.4e-53 214.5 454 38.1
Gohir.D10G033300 Gossypium hirsutum HOM05D002606 ORTHO05D003016 4.2e-53 213.0 399 38.6
Gorai.011G035100 Gossypium raimondii HOM05D002606 ORTHO05D003016 2.3e-51 207.2 403 38.5
Gohir.A10G032600 Gossypium hirsutum HOM05D002606 ORTHO05D003016 2.5e-50 203.8 410 36.6
Migut.M00971 Erythranthe guttata HOM05D002606 ORTHO05D003016 3.3e-50 203.4 347 39.5
Sopen02g020560 Solanum pennellii HOM05D002606 ORTHO05D003016 3.3e-50 203.4 435 38.2
vmacro03988 Vaccinium macrocarpon HOM05D002606 ORTHO05D003016 4.3e-50 203.0 422 37.7
Potri.011G077001 Populus trichocarpa HOM05D002606 ORTHO05D003016 5.6e-50 202.6 431 37.6
CANSAT35G1314 Cannabis sativa HOM05D002606 ORTHO05D003016 7.3e-50 202.2 405 37.3
Cfa001058 Carpinus fangiana HOM05D002606 ORTHO05D003016 9.6e-50 201.8 395 37.2
Manes.17G062800 Manihot esculenta HOM05D002606 ORTHO05D003016 2.8e-49 200.3 433 36.7
Eucgr.D00356 Eucalyptus grandis HOM05D002606 ORTHO05D003016 6.2e-49 199.1 519 33.9
Medtr8g087940 Medicago truncatula HOM05D002606 ORTHO05D003016 6.2e-49 199.1 414 35.0
Solyc02g071530.2 Solanum lycopersicum HOM05D002606 ORTHO05D003016 6.2e-49 199.1 431 36.7
TAR624G1252 Trochodendron aralioides HOM05D002606 ORTHO05D003016 6.2e-49 199.1 365 41.1
BcaB03g13871 Brassica carinata HOM05D002606 ORTHO05D003016 1.4e-48 198.0 416 36.5
Atru.chr10.1471 Acer truncatum HOM05D002606 ORTHO05D003016 1.8e-48 197.6 413 38.7
Thhalv10006968m.g Eutrema salsugineum HOM05D002606 ORTHO05D003016 2.4e-48 197.2 376 36.4
MSTRG.16192 Avicennia marina HOM05D002606 ORTHO05D003016 6.9e-48 195.7 450 34.9
COL.COLO4_22817 Corchorus olitorius HOM05D002606 ORTHO05D003016 6.9e-48 195.7 415 38.6
Prupe.4G072200 Prunus persica HOM05D002606 ORTHO05D003016 1.5e-47 194.5 414 37.4
Lsat_1_v5_gn_7_26381 Lactuca sativa HOM05D002606 ORTHO05D003016 1.7e-46 191.0 207 58.9
Lj4g0026804 Lotus japonicus HOM05D002606 ORTHO05D003016 3.8e-46 189.9 414 35.5
Psat7g066200 Pisum sativum HOM05D002606 ORTHO05D003016 3.8e-46 189.9 406 36.0
AUR62035823 Chenopodium quinoa HOM05D002606 ORTHO05D003016 1.1e-45 188.3 418 36.6
Sc24g0001920 Simmondsia chinensis HOM05D002606 ORTHO05D003016 1.4e-45 188.0 435 35.4
MD10G1269500 Malus domestica HOM05D002606 ORTHO05D003016 2.4e-45 187.2 398 38.4
CsaV3_1G032850 Cucumis sativus L. HOM05D002606 ORTHO05D003016 3.2e-45 186.8 407 36.1
Glyma.08G120900 Glycine max HOM05D002606 ORTHO05D003016 5.4e-45 186.0 397 35.0
AUR62027619 Chenopodium quinoa HOM05D002606 ORTHO05D003016 7.1e-45 185.7 417 35.5
CARHR028950 Cardamine hirsuta HOM05D002606 ORTHO05D003016 9.3e-45 185.3 426 33.6
TPR.G6726 Trifolium pratense HOM05D002606 ORTHO05D003016 1.2e-44 184.9 407 35.9
EL10Ac8g19815 Beta vulgaris HOM05D002606 ORTHO05D003016 2.7e-44 183.7 405 34.1
ATR0763G174 Amborella trichopoda HOM05D002606 ORTHO05D003016 4.6e-44 183.0 376 36.4
Aa31LG6G6030 Aethionema arabicum HOM05D002606 ORTHO05D003016 1.3e-43 181.4 403 34.7
PSO675G2539 Papaver somniferum HOM05D002606 ORTHO05D003016 1.3e-43 181.4 411 34.5
FvH4_3g06460 Fragaria vesca HOM05D002606 ORTHO05D003016 1.7e-43 181.0 428 35.0
AT1G29630 Arabidopsis thaliana HOM05D002606 ORTHO05D003016 3.9e-43 179.9 433 34.6
AL1G43460 Arabidopsis lyrata HOM05D002606 ORTHO05D003016 1.1e-42 178.3 433 34.6
PSO541G3031 Papaver somniferum HOM05D002606 ORTHO05D003016 1.1e-42 178.3 412 34.7
Sed0008006 Sechium edule HOM05D002606 ORTHO05D003016 1.1e-42 178.3 397 35.0
MELO3C002697.2 Cucumis melo HOM05D002606 ORTHO05D003016 3.3e-42 176.8 406 35.0
FAN25G0150 Fragaria x ananassa HOM05D002606 ORTHO05D003016 3.3e-42 176.8 429 35.4
FAN11G1742 Fragaria x ananassa HOM05D002606 ORTHO05D003016 4.3e-42 176.4 434 34.3
Sp1g25530 Schrenkiella parvula HOM05D002606 ORTHO05D003016 4.3e-42 176.4 442 33.7
BolC7t42094H Brassica oleracea HOM05D002606 ORTHO05D003016 5.6e-42 176.0 431 32.5
BraA07t28845Z Brassica rapa HOM05D002606 ORTHO05D003016 5.6e-42 176.0 427 32.6
DCAR_003956 Daucus carota HOM05D002606 ORTHO05D003016 5.6e-42 176.0 547 30.0
C07p16090 Brassica napus HOM05D002606 ORTHO05D003016 2.1e-41 174.1 428 32.5
A07p10450 Brassica napus HOM05D002606 ORTHO05D003016 3.6e-41 173.3 427 32.3
THA.LOC104812654 Tarenaya hassleriana HOM05D002606 ORTHO05D003016 8.1e-41 172.2 436 33.5
BcaC06g35445 Brassica carinata HOM05D002606 ORTHO05D003016 2.0e-39 167.5 391 32.7
GSVIVG01021316001 Vitis vinifera HOM05D002606 ORTHO05D003016 4.5e-39 166.4 362 34.5
RcHm_v2.0_Chr5g0012831 Rosa chinensis HOM05D002606 ORTHO05D003016 5.8e-39 166.0 369 36.9
Ciclev10014561m.g Citrus clementina HOM05D002606 ORTHO05D003016 1.3e-38 164.9 376 35.9
SalBow8G3031 Salvia bowleyana HOM05D002606 ORTHO05D003016 8.4e-38 162.2 443 32.5
SalBow8G0847 Salvia bowleyana HOM05D002606 ORTHO05D003016 2.4e-37 160.6 443 32.3
ClCG03G007250 Citrullus lanatus HOM05D002606 ORTHO05D003016 3.2e-37 160.2 377 35.3
FAN21G3713 Fragaria x ananassa HOM05D002606 ORTHO05D003016 1.2e-36 158.3 369 37.1
Carub.0001s2785 Capsella rubella HOM05D002606 ORTHO05D003016 2.1e-36 157.5 399 35.6
Ah.14g086800 Amaranthus hybridus HOM05D002606 ORTHO05D003016 3.5e-36 156.8 416 32.0
Actinidia16757 Actinidia chinensis HOM05D002606 ORTHO05D003016 2.3e-35 154.1 414 35.3
Phvul.002G243800 Phaseolus vulgaris HOM05D002606 ORTHO05D003016 3.0e-35 153.7 494 30.6
Peaxi162Scf00308g00815 Petunia axillaris HOM05D002606 ORTHO05D003016 6.7e-35 152.5 459 32.0
Ca_17874_v3 Cicer arietinum L. HOM05D002606 ORTHO05D003016 5.6e-34 149.4 375 34.4
Lalb_Chr12g0204841 Lupinus albus HOM05D002606 ORTHO05D003016 2.8e-33 147.1 521 27.4
Nitab4.5_0007383g0040 Nicotiana tabacum HOM05D002606 ORTHO05D003016 4.8e-33 146.4 472 31.1
arahy.Tifrunner.gnm1.ann1.0CW7N2 Arachis hypogaea HOM05D002606 ORTHO05D003016 8.1e-33 145.6 387 32.0
arahy.Tifrunner.gnm1.ann1.CS3QBI Arachis hypogaea HOM05D002606 ORTHO05D003016 8.1e-33 145.6 387 32.0
Nitab4.5_0003746g0040 Nicotiana tabacum HOM05D002606 ORTHO05D003016 1.4e-32 144.8 481 30.8
FAN16G3491 Fragaria x ananassa HOM05D002606 ORTHO05D003016 1.8e-32 144.4 383 34.5
Hma1.2p1_0015F.1_g010580 Hydrangea macrophylla HOM05D002606 ORTHO05D003016 2.4e-32 144.1 352 34.4
Os01g0777300 Oryza sativa ssp. japonica HOM05D002606 ORTHO05D003016 3.4e-31 140.2 413 30.8
PGSC0003DMG400007247 Solanum tuberosum HOM05D002606 ORTHO05D003016 1.7e-30 137.9 419 33.4
HPP92_017792 Vanilla planifolia HOM05D002606 ORTHO05D003016 1.7e-30 137.9 365 29.3
Cpa.g.sc17.162 Carica papaya HOM05D002606 ORTHO05D003016 4.9e-30 136.3 243 39.1
Hund17843 Selenicereus undatus HOM05D002606 ORTHO05D003016 6.7e-27 125.9 402 30.8
Zm00001eb151620 Zea mays HOM05D002606 ORTHO05D003016 7.4e-26 122.5 391 30.4
HanXRQChr01g0030101 Helianthus annuus HOM05D002606 ORTHO05D003016 1.1e-24 118.6 76 85.5
VMungo0251G0960 Vigna mungo HOM05D002606 ORTHO05D003016 1.1e-24 118.6 209 43.5
Haze_05456 Corylus avellana HOM05D002606 ORTHO05D003016 2.0e-23 114.4 220 35.5
Haze_05457 Corylus avellana HOM05D002606 ORTHO05D003016 6.5e-22 109.4 90 63.3
CSS0038732 Camellia sinensis var. sinensis HOM05D002606 ORTHO05D003016 1.1e-21 108.6 494 26.9
Eucgr.D00367 Eucalyptus grandis HOM05D002606 ORTHO05D003016 9.3e-21 105.5 193 41.5
Mapoly0124s0012 Marchantia polymorpha HOM05D002606 ORTHO05D003016 2.2e-17 94.4 428 27.8
unitig_32.g11096 Utricularia gibba HOM05D002606 ORTHO05D003016 2.2e-17 94.4 81 58.0
Haze_05454 Corylus avellana HOM05D002606 ORTHO05D003016 1.1e-16 92.0 76 68.4
HanXRQChr05g0133461 Helianthus annuus HOM05D002606 ORTHO05D003016 5.3e-16 89.7 47 93.6
MD00G1093000 Malus domestica HOM05D002606 ORTHO05D003016 5.3e-16 89.7 87 57.5
SHI19402 Sapria himalayana HOM05D002606 ORTHO05D003016 3.9e-11 73.6 75 50.7
Zm00001eb032720 Zea mays HOM05D006146 ORTHO05D007924 7.4e-10 69.3 58 62.1
Pp3c23_8000 Physcomitrium patens HOM05D002606 ORTHO05D003016 1.2e-07 62.0 399 22.8


User provided reference genes

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