Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr00c0994g0578191 Helianthus annuus HOM05D000216 ORTHO05D000634 1.9e-42 175.3 80 100.0
HanXRQChr00c0823g0577611 Helianthus annuus HOM05D000216 ORTHO05D000634 6.9e-40 166.8 75 100.0
HanXRQChr08g0210181 Helianthus annuus HOM05D000216 ORTHO05D000634 6.9e-40 166.8 75 100.0
HanXRQChr11g0326611 Helianthus annuus HOM05D000216 ORTHO05D000634 6.9e-40 166.8 75 100.0
HanXRQChr13g0417241 Helianthus annuus HOM05D000216 ORTHO05D001131 6.9e-40 166.8 75 100.0
HanXRQCPg0579801 Helianthus annuus HOM05D000216 ORTHO05D001131 6.9e-40 166.8 75 100.0
Lsat_1_v5_gn_1_118640 Lactuca sativa HOM05D000216 ORTHO05D000634 6.9e-40 166.8 75 100.0
Lsat_1_v5_gn_1_96161 Lactuca sativa HOM05D000216 ORTHO05D000634 6.9e-40 166.8 75 100.0
Lsat_1_v5_gn_8_1820 Lactuca sativa HOM05D000216 ORTHO05D000634 6.9e-40 166.8 75 100.0
RcHm_v2.0_CPg0502411 Rosa chinensis HOM05D000216 ORTHO05D000634 8.4e-38 159.8 75 94.7
Migut.D01343 Erythranthe guttata HOM05D000216 ORTHO05D000634 1.4e-37 159.1 75 94.7
Oeu062866.1 Olea europaea HOM05D000216 ORTHO05D000634 1.4e-37 159.1 75 94.7
ATCG00180 Arabidopsis thaliana HOM05D000216 ORTHO05D000634 2.5e-37 158.3 75 93.3
CARHR281930 Cardamine hirsuta HOM05D000216 ORTHO05D001131 2.5e-37 158.3 75 93.3
Lalb_Chr09g0335401 Lupinus albus HOM05D000216 ORTHO05D000634 3.2e-37 157.9 75 93.3
MELO3C027102.2 Cucumis melo HOM05D000216 ORTHO05D000634 4.2e-37 157.5 75 93.3
Sed0020606 Sechium edule HOM05D000216 ORTHO05D000634 4.2e-37 157.5 75 93.3
Sed0024913 Sechium edule HOM05D000216 ORTHO05D000634 4.2e-37 157.5 75 93.3
Sed0025165 Sechium edule HOM05D000216 ORTHO05D000634 4.2e-37 157.5 75 93.3
Gorai.005G167700 Gossypium raimondii HOM05D000216 ORTHO05D001131 5.5e-37 157.1 75 93.3
Potri.013G140850 Populus trichocarpa HOM05D000216 ORTHO05D000634 5.5e-37 157.1 75 93.3
PGR111G0082 Punica granatum HOM05D000216 ORTHO05D000634 5.5e-37 157.1 75 93.3
CAN.G2141.5 Capsicum annuum HOM05D000216 ORTHO05D000634 7.2e-37 156.8 75 93.3
CAN.G481.11 Capsicum annuum HOM05D000216 ORTHO05D000634 7.2e-37 156.8 75 93.3
Atru.chr13.1918 Acer truncatum HOM05D000216 ORTHO05D000634 1.2e-36 156.0 75 92.0
BNapus_Darmor_BZH_scaffold_253p00070 Brassica napus HOM05D000216 ORTHO05D000634 1.6e-36 155.6 75 92.0
BolSC37t60766H Brassica oleracea HOM05D000216 ORTHO05D000634 1.6e-36 155.6 75 92.0
BolSC45t60875H Brassica oleracea HOM05D000216 ORTHO05D000634 1.6e-36 155.6 75 92.0
BolSC45t60939H Brassica oleracea HOM05D000216 ORTHO05D000634 1.6e-36 155.6 75 92.0
BraSC140t45586Z Brassica rapa HOM05D000216 ORTHO05D000634 1.6e-36 155.6 75 92.0
BraSC140t45599Z Brassica rapa HOM05D000216 ORTHO05D000634 1.6e-36 155.6 75 92.0
BraSC58t46407Z Brassica rapa HOM05D000216 ORTHO05D000634 1.6e-36 155.6 75 92.0
PSO548G0054 Papaver somniferum HOM05D000216 ORTHO05D000634 1.6e-36 155.6 75 90.7
arahy.Tifrunner.gnm1.ann1.YJD706 Arachis hypogaea HOM05D000216 ORTHO05D000634 2.7e-36 154.8 75 90.7
DCAR_032475 Daucus carota HOM05D000216 ORTHO05D000634 2.7e-36 154.8 75 92.0
LjContig00318g0019842 Lotus japonicus HOM05D000216 ORTHO05D000634 6.1e-36 153.7 75 90.7
Nn082s42673 Nelumbo nucifera HOM05D000216 ORTHO05D000634 6.1e-36 153.7 75 90.7
Medtr3g062770 Medicago truncatula HOM05D000216 ORTHO05D000634 1.8e-35 152.1 75 89.3
Medtr3g062790 Medicago truncatula HOM05D000216 ORTHO05D000634 1.8e-35 152.1 75 89.3
ATR0227G001 Amborella trichopoda HOM05D000216 ORTHO05D001131 3.9e-35 151.0 74 89.2
RcHm_v2.0_Chr2g0102161 Rosa chinensis HOM05D000216 ORTHO05D000634 3.9e-35 151.0 75 90.7
EL10As12g24016 Beta vulgaris HOM05D000216 ORTHO05D001131 1.5e-34 149.1 71 93.0
CAN.G219.18 Capsicum annuum HOM05D000216 ORTHO05D000634 1.5e-34 149.1 75 89.3
arahy.Tifrunner.gnm1.ann1.F4653T Arachis hypogaea HOM05D000216 ORTHO05D000634 3.3e-34 147.9 75 86.7
Hund27655 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.3e-34 147.5 75 85.3
Hund27866 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.3e-34 147.5 75 85.3
Medtr4g051130 Medicago truncatula HOM05D000216 ORTHO05D001131 1.3e-33 146.0 71 90.1
Psat0s6357g0040 Pisum sativum HOM05D000216 ORTHO05D001131 4.8e-33 144.1 71 88.7
Psat7g026840 Pisum sativum HOM05D000216 ORTHO05D001131 4.8e-33 144.1 71 88.7
Lalb_Chr24g0400921 Lupinus albus HOM05D000216 ORTHO05D000634 6.9e-32 140.2 68 92.6
Gorai.004G101400 Gossypium raimondii HOM05D000216 ORTHO05D001131 3.4e-31 137.9 70 90.0
Gohir.D08G095620 Gossypium hirsutum HOM05D000216 ORTHO05D001131 7.2e-29 130.2 70 85.7
CSS0028306 Camellia sinensis var. sinensis HOM05D000216 ORTHO05D000634 5.7e-26 120.6 53 96.2
LjContig00489g0016986 Lotus japonicus HOM05D000216 ORTHO05D000634 1.5e-23 112.5 56 91.1
Medtr0002s0510 Medicago truncatula HOM05D000216 ORTHO05D001131 7.7e-23 110.2 64 73.4
Gorai.008G086500 Gossypium raimondii HOM05D000216 ORTHO05D001131 1.1e-21 106.3 56 83.9
Solyc01g017370.2 Solanum lycopersicum HOM05D000216 ORTHO05D000634 3.3e-18 94.7 44 93.2
HanXRQChr10g0282571 Helianthus annuus HOM05D000216 ORTHO05D000634 1.3e-17 92.8 43 100.0
SMO168G0002 Selaginella moellendorffii HOM05D000216 ORTHO05D000634 4.5e-15 84.3 74 52.7
Medtr8g018880 Medicago truncatula HOM05D000216 ORTHO05D000634 1.3e-14 82.8 50 72.0
SMO086G0006 Selaginella moellendorffii HOM05D000216 ORTHO05D000634 1.1e-13 79.7 69 53.6
Solyc12g035870.3 Solanum lycopersicum HOM05D000216 ORTHO05D001131 8.8e-11 70.1 33 84.8
CARHR181340 Cardamine hirsuta HOM05D000216 ORTHO05D000634 1.5e-10 69.3 37 78.4
Solyc00g500052.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 1.5e-10 69.3 39 82.1
Solyc00g500135.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 1.5e-10 69.3 39 82.1
Solyc00g500205.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 1.5e-10 69.3 39 82.1
arahy.Tifrunner.gnm1.ann1.ITK2CB Arachis hypogaea HOM05D000388 ORTHO05D000473 6.3e-09 63.9 26 96.2
Oeu054668.1 Olea europaea HOM05D000445 ORTHO05D000634 2.7e-07 58.5 26 88.5
Pp3c19_12990 Physcomitrium patens HOM05D000216 ORTHO05D000634 1.3e-06 56.2 27 85.2


User provided reference genes

Program Settings