Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_011391 Vanilla planifolia HOM05D002121 ORTHO05D008891 1.2e-225 786.2 394 100.0
Aqoxy6G00263 Aquilegia oxysepala HOM05D002121 ORTHO05D008891 7.4e-119 431.4 313 68.1
Zm00001eb243580 Zea mays HOM05D002121 ORTHO05D008891 6.9e-117 424.9 363 61.4
MBI06_g04552_MAGBIO Magnolia biondii HOM05D002121 ORTHO05D008891 9.1e-117 424.5 310 67.1
RcHm_v2.0_Chr6g0296321 Rosa chinensis HOM05D002121 ORTHO05D008891 3.4e-116 422.5 352 61.4
TAR376G0507 Trochodendron aralioides HOM05D002121 ORTHO05D008891 4.5e-116 422.2 311 65.9
Nn1g08892 Nelumbo nucifera HOM05D002121 ORTHO05D008891 2.9e-115 419.5 387 57.9
CsaV3_6G034200 Cucumis sativus L. HOM05D002121 ORTHO05D008891 6.5e-115 418.3 363 59.2
Prupe.1G492700 Prunus persica HOM05D002121 ORTHO05D008891 1.1e-114 417.5 356 61.0
MELO3C010637.2 Cucumis melo HOM05D002121 ORTHO05D008891 1.4e-114 417.2 363 59.2
FAN27G1590 Fragaria x ananassa HOM05D002121 ORTHO05D008891 1.9e-114 416.8 332 62.7
Os02g0552600 Oryza sativa ssp. japonica HOM05D002121 ORTHO05D008891 1.9e-114 416.8 311 66.6
Ciclev10001657m.g Citrus clementina HOM05D002121 ORTHO05D008891 3.2e-114 416.0 324 63.0
FAN20G0023 Fragaria x ananassa HOM05D002121 ORTHO05D008891 4.2e-114 415.6 358 59.8
Gorai.009G248000 Gossypium raimondii HOM05D002121 ORTHO05D008891 4.2e-114 415.6 367 58.3
CANSAT25G1674 Cannabis sativa HOM05D002121 ORTHO05D008891 9.4e-114 414.5 311 65.0
Glyma.06G115500 Glycine max HOM05D002121 ORTHO05D008891 1.6e-113 413.7 311 64.0
Manes.02G166400 Manihot esculenta HOM05D002121 ORTHO05D008891 1.6e-113 413.7 360 56.7
Haze_17516 Corylus avellana HOM05D002121 ORTHO05D008891 2.1e-113 413.3 356 59.3
Eucgr.F03811 Eucalyptus grandis HOM05D002121 ORTHO05D008891 2.1e-113 413.3 312 63.5
Hund17311 Selenicereus undatus HOM05D002121 ORTHO05D008891 4.7e-113 412.1 348 60.3
THA.LOC104800213 Tarenaya hassleriana HOM05D002121 ORTHO05D008891 4.7e-113 412.1 331 61.6
FvH4_2g27490 Fragaria vesca HOM05D002121 ORTHO05D008891 7.9e-113 411.4 358 59.2
Gohir.A05G237100 Gossypium hirsutum HOM05D002121 ORTHO05D008891 7.9e-113 411.4 362 58.0
Gohir.D05G239200 Gossypium hirsutum HOM05D002121 ORTHO05D008891 7.9e-113 411.4 311 64.0
ATR0709G083 Amborella trichopoda HOM05D002121 ORTHO05D008891 3.0e-112 409.5 349 60.7
CiPaw.15G034100 Carya illinoinensis HOM05D002121 ORTHO05D008891 3.0e-112 409.5 366 57.9
Actinidia03419 Actinidia chinensis HOM05D002121 ORTHO05D008891 3.9e-112 409.1 311 64.0
FAN15G1848 Fragaria x ananassa HOM05D002121 ORTHO05D008891 3.9e-112 409.1 358 58.9
Atru.chr13.1527 Acer truncatum HOM05D002121 ORTHO05D008891 5.1e-112 408.7 315 62.2
Thecc.08G129600 Theobroma cacao HOM05D002121 ORTHO05D008891 5.1e-112 408.7 311 63.7
Cpa.g.sc64.123 Carica papaya HOM05D002121 ORTHO05D008891 2.0e-111 406.8 324 61.4
Lj1g0016880 Lotus japonicus HOM05D002121 ORTHO05D008891 3.3e-111 406.0 313 64.2
Duzib093G0305 Durio zibethinus HOM05D002121 ORTHO05D008891 4.4e-111 405.6 366 56.6
Dinv27282 Davidia involucrata HOM05D002121 ORTHO05D008891 7.4e-111 404.8 311 63.7
QL09p033741 Quercus lobata HOM05D002121 ORTHO05D008891 1.7e-110 403.7 334 61.1
TWI32G0996 Tripterygium wilfordii HOM05D002121 ORTHO05D008891 2.2e-110 403.3 361 57.1
CDE08G1413 Ceratophyllum demersum HOM05D002121 ORTHO05D008891 4.8e-110 402.1 312 61.5
Migut.C01114 Erythranthe guttata HOM05D002121 ORTHO05D008891 1.8e-109 400.2 366 57.4
Potri.005G180700 Populus trichocarpa HOM05D002121 ORTHO05D008891 1.8e-109 400.2 359 57.1
AUR62002267 Chenopodium quinoa HOM05D002121 ORTHO05D008891 2.4e-109 399.8 395 51.6
Nitab4.5_0000111g0140 Nicotiana tabacum HOM05D002121 ORTHO05D008891 2.4e-109 399.8 359 58.5
Sopen11g009470 Solanum pennellii HOM05D002121 ORTHO05D008891 2.4e-109 399.8 360 59.4
Rhsim11G0070100 Rhododendron simsii HOM05D002121 ORTHO05D008891 3.1e-109 399.4 375 56.3
CSS0024419 Camellia sinensis var. sinensis HOM05D002121 ORTHO05D008891 4.1e-109 399.1 375 55.7
Phvul.009G127600 Phaseolus vulgaris HOM05D002121 ORTHO05D008891 4.1e-109 399.1 368 55.2
COL.COLO4_37918 Corchorus olitorius HOM05D002121 ORTHO05D008891 5.3e-109 398.7 398 53.8
PGSC0003DMG400009246 Solanum tuberosum HOM05D002121 ORTHO05D008891 5.3e-109 398.7 356 59.3
arahy.Tifrunner.gnm1.ann1.VL2KU3 Arachis hypogaea HOM05D002121 ORTHO05D008891 9.1e-109 397.9 312 63.1
Ca_16577_v3 Cicer arietinum L. HOM05D002121 ORTHO05D008891 1.2e-108 397.5 350 58.0
arahy.Tifrunner.gnm1.ann1.IC0JL2 Arachis hypogaea HOM05D002121 ORTHO05D008891 2.0e-108 396.7 312 62.8
Cc10_g12290 Coffea canephora HOM05D002121 ORTHO05D008891 2.0e-108 396.7 367 55.9
MSTRG.25368 Avicennia marina HOM05D002121 ORTHO05D008891 3.4e-108 396.0 367 57.8
Thhalv10008051m.g Eutrema salsugineum HOM05D002121 ORTHO05D008891 7.7e-108 394.8 365 55.6
Psat5g086080 Pisum sativum HOM05D002121 ORTHO05D008891 7.7e-108 394.8 311 63.0
SGA_v2.0_scaffold52G18936 Striga asiatica HOM05D002121 ORTHO05D008891 7.7e-108 394.8 369 56.1
PSO170G0582 Papaver somniferum HOM05D002121 ORTHO05D008891 1.3e-107 394.0 374 56.7
CAN.G1391.3 Capsicum annuum HOM05D002121 ORTHO05D008891 2.2e-107 393.3 357 57.1
Lalb_Chr23g0271121 Lupinus albus HOM05D002121 ORTHO05D008891 2.2e-107 393.3 371 56.3
Medtr3g088510 Medicago truncatula HOM05D002121 ORTHO05D008891 2.9e-107 392.9 362 57.2
Sc15g0002960 Simmondsia chinensis HOM05D002121 ORTHO05D008891 3.8e-107 392.5 303 63.4
AT1G21710 Arabidopsis thaliana HOM05D002121 ORTHO05D008891 1.1e-106 391.0 310 61.6
BolC5t30768H Brassica oleracea HOM05D002121 ORTHO05D004000 1.1e-106 391.0 337 59.3
Aa31LG7G5680 Aethionema arabicum HOM05D002121 ORTHO05D008891 1.4e-106 390.6 365 55.1
EL10Ac1g00004 Beta vulgaris HOM05D002121 ORTHO05D008891 1.4e-106 390.6 358 55.9
BraA06t24872Z Brassica rapa HOM05D002121 ORTHO05D008891 1.4e-106 390.6 338 59.5
A06p17800 Brassica napus HOM05D002121 ORTHO05D004000 1.9e-106 390.2 338 59.5
HanXRQChr05g0148721 Helianthus annuus HOM05D002121 ORTHO05D008891 1.9e-106 390.2 358 55.6
BcaC05g26090 Brassica carinata HOM05D002121 ORTHO05D008891 5.5e-106 388.7 337 58.8
VMungo1309G2347 Vigna mungo HOM05D002121 ORTHO05D008891 5.5e-106 388.7 368 54.6
Carub.0001s2115 Capsella rubella HOM05D002121 ORTHO05D008891 9.4e-106 387.9 365 55.9
Ah.05g171490 Amaranthus hybridus HOM05D002121 ORTHO05D008891 1.2e-105 387.5 374 52.9
C05p20690 Brassica napus HOM05D002121 ORTHO05D004000 1.2e-105 387.5 338 59.5
Sp1g19270 Schrenkiella parvula HOM05D002121 ORTHO05D008891 2.1e-105 386.7 337 58.2
BcaB07g32168 Brassica carinata HOM05D002121 ORTHO05D008891 2.7e-105 386.3 311 61.4
AL1G34880 Arabidopsis lyrata HOM05D002121 ORTHO05D008891 8.0e-105 384.8 365 54.8
BcaB03g12775 Brassica carinata HOM05D002121 ORTHO05D008891 1.8e-104 383.6 366 55.5
ClCG08G005910 Citrullus lanatus HOM05D002121 ORTHO05D008891 2.3e-104 383.3 315 60.6
CARHR022070 Cardamine hirsuta HOM05D002121 ORTHO05D008891 3.0e-104 382.9 365 55.1
DCAR_014379 Daucus carota HOM05D001700 ORTHO05D002131 8.8e-104 381.3 363 55.1
FAN24G0685 Fragaria x ananassa HOM05D002121 ORTHO05D008891 3.3e-103 379.4 358 56.4
Lsat_1_v5_gn_6_97640 Lactuca sativa HOM05D002121 ORTHO05D008891 3.3e-103 379.4 371 55.3
vmacro00852 Vaccinium macrocarpon HOM05D002121 ORTHO05D008891 1.1e-101 374.4 402 51.7
SEGI_00220 Sequoiadendron giganteum HOM05D002121 ORTHO05D008891 2.0e-100 370.2 319 58.0
SEGI_39313 Sequoiadendron giganteum HOM05D002121 ORTHO05D008891 2.0e-100 370.2 319 58.0
Mapoly0066s0098 Marchantia polymorpha HOM05D002121 ORTHO05D008891 2.2e-99 366.7 318 58.8
Pp3c15_7530 Physcomitrium patens HOM05D002121 ORTHO05D008891 6.5e-99 365.2 311 58.8
Peaxi162Scf00310g00513 Petunia axillaris HOM05D002121 ORTHO05D008891 6.1e-97 358.6 345 56.2
SMO367G0241 Selaginella moellendorffii HOM05D002121 ORTHO05D008891 8.2e-94 348.2 313 56.9
AagrBONN_evm.TU.Sc2ySwM_228.2791 Anthoceros agrestis HOM05D002121 ORTHO05D008891 1.2e-92 344.4 313 56.5
Dinv14647 Davidia involucrata HOM05D002121 ORTHO05D008891 5.9e-92 342.0 273 61.2
Lj7A344T50 Lonicera japonica HOM05D002121 ORTHO05D008891 5.9e-92 342.0 305 56.1
Sed0022381 Sechium edule HOM05D002121 ORTHO05D008891 5.0e-91 339.0 321 56.4
Solyc11g018510.2 Solanum lycopersicum HOM05D002121 ORTHO05D008891 2.3e-88 330.1 305 59.0
Sabra05G0136700 Salix brachista HOM05D002121 ORTHO05D008891 1.2e-87 327.8 220 69.1
Hma1.2p1_0612F.1_g188790 Hydrangea macrophylla HOM05D002121 ORTHO05D008891 2.3e-83 313.5 258 60.9
DCAR_002302 Daucus carota HOM05D002121 ORTHO05D008891 1.6e-81 307.4 308 53.6
AUR62015427 Chenopodium quinoa HOM05D002121 ORTHO05D008891 2.6e-79 300.1 377 44.0
CAN.G1347.2 Capsicum annuum HOM05D002121 ORTHO05D008891 4.7e-73 279.3 362 45.9
unitig_699.g19768 Utricularia gibba HOM05D002121 ORTHO05D003088 1.7e-70 270.8 362 44.5
GSVIVG01008832001 Vitis vinifera HOM05D002121 ORTHO05D008891 3.7e-70 269.6 171 71.3
SalBow7G2694 Salvia bowleyana HOM05D002121 ORTHO05D008891 7.3e-66 255.4 170 69.4
Cre01.g063632 Chlamydomonas reinhardtii HOM05D002121 ORTHO05D008891 3.6e-65 253.1 420 38.6
ECA246G4340 Erigeron canadensis HOM05D002121 ORTHO05D008891 1.2e-63 248.1 161 70.2
BcaB03g12777 Brassica carinata HOM05D002121 ORTHO05D008891 1.5e-63 247.7 170 68.2
MCO08G296 Micromonas commoda HOM05D002121 ORTHO05D008891 5.8e-63 245.7 399 39.1
Migut.C00404 Erythranthe guttata HOM05D002121 ORTHO05D008891 9.2e-61 238.4 239 53.1
Sc15g0002990 Simmondsia chinensis HOM05D002121 ORTHO05D008891 1.6e-52 211.1 178 60.7
Oeu032210.1 Olea europaea HOM05D002121 ORTHO05D008891 2.8e-49 200.3 126 71.4
MBI06_g44498_MAGBIO Magnolia biondii HOM05D002121 ORTHO05D008891 2.9e-46 190.3 232 48.7
Sc15g0002970 Simmondsia chinensis HOM05D002121 ORTHO05D008891 2.4e-32 144.1 122 57.4
RcHm_v2.0_Chr2g0118881 Rosa chinensis HOM05D002121 ORTHO05D008891 1.9e-26 124.4 98 62.2
PRCOL_00001975 Prasinoderma coloniale HOM05D002121 ORTHO05D008891 9.3e-21 105.5 238 31.1
HanXRQChr15g0473481 Helianthus annuus HOM05D002121 ORTHO05D008891 5.3e-16 89.7 54 72.2
Cfa022494 Carpinus fangiana HOM05D002121 ORTHO05D008891 2.6e-15 87.4 178 33.1
Hma1.2p1_0612F.1_g188810 Hydrangea macrophylla HOM05D002121 ORTHO05D008891 2.2e-14 84.3 56 67.9
CBR_g3761 Chara braunii HOM05D002121 ORTHO05D008891 2.3e-11 74.3 195 30.8
PRCOL_00004066 Prasinoderma coloniale HOM05D002121 ORTHO05D008891 3.3e-10 70.5 148 29.7
SalBow6G7050 Salvia bowleyana HOM05D007129 ORTHO05D008680 5.9e-07 59.7 106 37.7
SGA_v2.0_scaffold7G04113 Striga asiatica HOM05D007129 ORTHO05D008680 5.9e-07 59.7 112 32.1
BcaNung06176 Brassica carinata HOM05D007129 ORTHO05D008680 7.7e-07 59.3 110 35.5
MCO09G188 Micromonas commoda HOM05D007129 ORTHO05D008680 2.2e-06 57.8 101 35.6
vmacro16590 Vaccinium macrocarpon HOM05D007129 ORTHO05D008680 2.2e-06 57.8 114 35.1
THA.LOC104821441 Tarenaya hassleriana HOM05D007129 ORTHO05D008680 5.0e-06 56.6 109 35.8
Oeu016337.1 Olea europaea HOM05D007129 ORTHO05D008680 6.5e-06 56.2 70 41.4
COL.COLO4_04322 Corchorus olitorius HOM05D002131 ORTHO05D008680 8.5e-06 55.8 111 34.2


User provided reference genes

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