Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_006948 Vanilla planifolia HOM05D000159 ORTHO05D432287 1.0e-145 520.0 259 100.0
Sabra10G0013400 Salix brachista HOM05D000159 ORTHO05D005826 3.5e-16 89.7 237 30.8
Gorai.005G056500 Gossypium raimondii HOM05D000159 ORTHO05D005826 3.8e-15 86.3 246 28.0
Gohir.D02G051200 Gossypium hirsutum HOM05D000159 ORTHO05D005826 5.0e-15 85.9 246 28.0
Gohir.A02G045200 Gossypium hirsutum HOM05D000159 ORTHO05D005826 8.6e-15 85.1 246 28.0
Thecc.04G274300 Theobroma cacao HOM05D000159 ORTHO05D005826 3.3e-14 83.2 253 26.5
Duzib052G1068 Durio zibethinus HOM05D000159 ORTHO05D005826 4.2e-14 82.8 263 26.2
Nn4g26087 Nelumbo nucifera HOM05D000159 ORTHO05D005826 7.2e-14 82.0 273 27.8
CiPaw.01G155500 Carya illinoinensis HOM05D000159 ORTHO05D005826 1.6e-13 80.9 254 26.8
QL06p006708 Quercus lobata HOM05D000159 ORTHO05D005826 2.8e-13 80.1 271 26.2
Potri.008G197000 Populus trichocarpa HOM05D000159 ORTHO05D005826 1.0e-12 78.2 241 28.6
Duzib151G0552 Durio zibethinus HOM05D000159 ORTHO05D005826 1.4e-12 77.8 259 25.9
Atru.chr4.2720 Acer truncatum HOM05D000159 ORTHO05D005826 1.8e-12 77.4 239 26.8
Dinv38341 Davidia involucrata HOM05D000159 ORTHO05D005826 4.0e-12 76.3 258 25.6
Eucgr.B01228 Eucalyptus grandis HOM05D000159 ORTHO05D005826 4.0e-12 76.3 246 28.5
TAR362G1250 Trochodendron aralioides HOM05D000159 ORTHO05D005826 4.0e-12 76.3 249 28.5
CSS0008234 Camellia sinensis var. sinensis HOM05D000159 ORTHO05D005826 5.2e-12 75.9 277 27.1
Cpa.g.sc447.1 Carica papaya HOM05D000159 ORTHO05D005826 5.2e-12 75.9 243 27.2
Potri.010G026200 Populus trichocarpa HOM05D000159 ORTHO05D005826 5.2e-12 75.9 237 27.8
Duzib212G0185 Durio zibethinus HOM05D000159 ORTHO05D005826 8.9e-12 75.1 234 27.8
Cfa015518 Carpinus fangiana HOM05D000159 ORTHO05D005826 1.2e-11 74.7 244 25.4
Sabra08G0163300 Salix brachista HOM05D000159 ORTHO05D005826 2.6e-11 73.6 222 27.9
TWI09G1437 Tripterygium wilfordii HOM05D000159 ORTHO05D005826 5.7e-11 72.4 259 29.3
Actinidia40205 Actinidia chinensis HOM05D000159 ORTHO05D005826 7.5e-11 72.0 259 25.9
Hma1.2p1_0078F.1_g040940 Hydrangea macrophylla HOM05D000159 ORTHO05D005826 7.5e-11 72.0 246 29.3
PSO170G1191 Papaver somniferum HOM05D000159 ORTHO05D005826 9.8e-11 71.6 264 26.1
ATR0487G022 Amborella trichopoda HOM05D000159 ORTHO05D005826 1.3e-10 71.2 248 28.6
Ciclev10004348m.g Citrus clementina HOM05D000159 ORTHO05D005826 3.7e-10 69.7 248 25.4
Nn3g21216 Nelumbo nucifera HOM05D000159 ORTHO05D005826 6.3e-10 68.9 250 27.2
Gohir.A10G104100 Gossypium hirsutum HOM05D000159 ORTHO05D005826 1.1e-09 68.2 228 28.1
Manes.15G019100 Manihot esculenta HOM05D000159 ORTHO05D005826 1.1e-09 68.2 243 25.5
PSO302G0006 Papaver somniferum HOM05D000159 ORTHO05D005826 1.8e-09 67.4 231 25.5
Haze_01032 Corylus avellana HOM05D000159 ORTHO05D005826 3.2e-09 66.6 244 24.2
Thhalv10012721m.g Eutrema salsugineum HOM05D000159 ORTHO05D005826 3.2e-09 66.6 246 27.2
AL6G30190 Arabidopsis lyrata HOM05D000159 ORTHO05D005826 4.1e-09 66.2 253 24.5
CAN.G627.7 Capsicum annuum HOM05D000159 ORTHO05D005826 4.1e-09 66.2 253 25.7
Carub.0006s1715 Capsella rubella HOM05D000159 ORTHO05D005826 7.0e-09 65.5 257 26.5
FAN22G0013 Fragaria x ananassa HOM05D000159 ORTHO05D005826 7.0e-09 65.5 245 24.5
Sc19g0004810 Simmondsia chinensis HOM05D000159 ORTHO05D005826 9.2e-09 65.1 233 26.6
TWI53G1317 Tripterygium wilfordii HOM05D000159 ORTHO05D005826 9.2e-09 65.1 250 30.0
Sp6g25540 Schrenkiella parvula HOM05D000159 ORTHO05D005826 1.2e-08 64.7 252 25.8
Aa31LG11G10870 Aethionema arabicum HOM05D000159 ORTHO05D005826 1.6e-08 64.3 244 23.4
BraA10t44145Z Brassica rapa HOM05D000159 ORTHO05D005826 1.6e-08 64.3 262 24.4
vmacro08227 Vaccinium macrocarpon HOM05D000159 ORTHO05D005826 1.6e-08 64.3 252 25.4
Solyc01g080670.3 Solanum lycopersicum HOM05D000159 ORTHO05D005826 2.0e-08 63.9 240 26.2
PGSC0003DMG401006284 Solanum tuberosum HOM05D000159 ORTHO05D005826 2.0e-08 63.9 239 23.0
CiPaw.02G088100 Carya illinoinensis HOM05D000159 ORTHO05D005826 2.7e-08 63.5 262 24.0
CARHR194170 Cardamine hirsuta HOM05D000159 ORTHO05D005826 4.5e-08 62.8 255 26.3
BcaB05g23345 Brassica carinata HOM05D000159 ORTHO05D005826 5.9e-08 62.4 246 26.0
MELO3C006596.2 Cucumis melo HOM05D000159 ORTHO05D005826 5.9e-08 62.4 261 26.1
Gorai.011G183800 Gossypium raimondii HOM05D000159 ORTHO05D005826 5.9e-08 62.4 238 26.1
C09p57670 Brassica napus HOM05D000159 ORTHO05D005826 7.8e-08 62.0 248 25.4
Nitab4.5_0000059g0380 Nicotiana tabacum HOM05D000159 ORTHO05D005826 7.8e-08 62.0 251 27.1
Nitab4.5_0000700g0020 Nicotiana tabacum HOM05D000159 ORTHO05D005826 7.8e-08 62.0 250 26.8
BcaC04g18642 Brassica carinata HOM05D000159 ORTHO05D005826 1.0e-07 61.6 248 25.4
BolC9t58634H Brassica oleracea HOM05D000159 ORTHO05D005826 1.0e-07 61.6 248 25.4
CANSAT78G0585 Cannabis sativa HOM05D000159 ORTHO05D005826 1.0e-07 61.6 273 22.3
FvH4_4g16910 Fragaria vesca HOM05D000159 ORTHO05D005826 1.0e-07 61.6 245 24.5
FAN12G1424 Fragaria x ananassa HOM05D000159 ORTHO05D005826 1.0e-07 61.6 245 24.5
FAN07G2410 Fragaria x ananassa HOM05D000159 ORTHO05D005826 1.3e-07 61.2 245 24.1
FAN12G2984 Fragaria x ananassa HOM05D000159 ORTHO05D005826 1.3e-07 61.2 245 24.5
MD16G1177600 Malus domestica HOM05D000159 ORTHO05D005826 1.3e-07 61.2 248 25.8
Sopen01g030830 Solanum pennellii HOM05D000159 ORTHO05D005826 1.3e-07 61.2 246 26.0
CsaV3_3G014040 Cucumis sativus L. HOM05D000159 ORTHO05D005826 1.7e-07 60.8 259 25.5
Lj6A666G52 Lonicera japonica HOM05D000159 ORTHO05D005826 1.7e-07 60.8 252 25.8
Lalb_Chr18g0055831 Lupinus albus HOM05D000159 ORTHO05D005826 2.9e-07 60.1 234 23.5
RcHm_v2.0_Chr4g0420491 Rosa chinensis HOM05D000159 ORTHO05D005826 3.9e-07 59.7 245 24.1
FAN17G0055 Fragaria x ananassa HOM05D000159 ORTHO05D005826 5.0e-07 59.3 245 24.1
Rhsim04G0214100 Rhododendron simsii HOM05D000159 ORTHO05D005826 5.0e-07 59.3 243 23.0
Hund20628 Selenicereus undatus HOM05D000159 ORTHO05D005826 5.0e-07 59.3 256 25.8
EL10Ac3g06527 Beta vulgaris HOM05D000159 ORTHO05D005826 6.6e-07 58.9 237 25.3
arahy.Tifrunner.gnm1.ann1.M2TLIU Arachis hypogaea HOM05D000159 ORTHO05D005826 8.6e-07 58.5 228 26.3
Phvul.006G159700 Phaseolus vulgaris HOM05D000159 ORTHO05D005826 8.6e-07 58.5 236 29.2
THA.LOC104827127 Tarenaya hassleriana HOM05D000159 ORTHO05D005826 8.6e-07 58.5 234 23.5
CSS0042519 Camellia sinensis var. sinensis HOM05D000159 ORTHO05D005826 1.1e-06 58.2 254 24.4
Glyma.13G213400 Glycine max HOM05D000159 ORTHO05D005826 1.1e-06 58.2 251 26.3
arahy.Tifrunner.gnm1.ann1.1D7P49 Arachis hypogaea HOM05D000159 ORTHO05D005826 1.5e-06 57.8 230 26.1
A10p20800 Brassica napus HOM05D000159 ORTHO05D005826 1.5e-06 57.8 257 24.5
MD13G1175800 Malus domestica HOM05D000159 ORTHO05D005826 1.9e-06 57.4 253 23.7
Os05g0408200 Oryza sativa ssp. japonica HOM05D000159 ORTHO05D005826 1.9e-06 57.4 255 23.9
BcaB08g36641 Brassica carinata HOM05D000159 ORTHO05D005826 2.5e-06 57.0 263 24.0
AT5G18830 Arabidopsis thaliana HOM05D000159 ORTHO05D005826 3.3e-06 56.6 249 24.9
GSVIVG01017835001 Vitis vinifera HOM05D000159 ORTHO05D005826 3.3e-06 56.6 250 24.8
Cc03_g02580 Coffea canephora HOM05D000159 ORTHO05D005826 5.6e-06 55.8 265 23.0
Ah.13g074380 Amaranthus hybridus HOM05D000159 ORTHO05D005826 7.3e-06 55.5 242 25.6


User provided reference genes

Program Settings