Gene: vmacro08227

General Information

Structural Information

  • Species Vaccinium macrocarpon
  • Gene Identifier vmacro08227
  • Transcript Identifier vmacro08227-RA
  • Gene Type Coding gene
  • Location chr6_Vaccinium_macrocarpon_Stevens_v1 : 34003834-34011967 : negative

Gene Family Information

  • ID HOM05D000159
  • #Genes/#Species 2316/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id vmacro08227_Vaccinium_macrocarpon_Stevens_v1

Descriptions

  • Description Similar to SPL7: Squamosa promoter-binding-like protein 7 (Arabidopsis thaliana OX=3702)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
ISO
PLAZA Integrative Orthologyregulation of transcription, DNA-templated AT5G18830
GO:0035874
ISO
PLAZA Integrative Orthologycellular response to copper ion starvation AT5G18830
GO:0048638
ISO
PLAZA Integrative Orthologyregulation of developmental growth AT5G18830
GO:0055070
ISO
PLAZA Integrative Orthologycopper ion homeostasis AT5G18830

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G18830
GO:0042803
ISO
PLAZA Integrative Orthologyprotein homodimerization activity AT5G18830
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT5G18830

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
InterPronucleus
GO:0016607
ISO
PLAZA Integrative Orthologynuclear speck AT5G18830

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR044817 Squamosa promoter-binding-like protein
IPR036893 SBP domain superfamily
IPR004333 SBP domain
Mapman id Description
15.5.18 RNA biosynthesis.transcriptional regulation.transcription factor (SBP)
25.4.3.1.1 Nutrient uptake.metal homeostasis.copper.regulation.copper homeostasis regulator (SPL7)