Gene: Sopen01g030830

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen01g030830
  • Transcript Identifier Sopen01g030830.2
  • Gene Type Coding gene
  • Location Spenn-ch01 : 88179413-88187513 : negative

Gene Family Information

  • ID HOM05D000159
  • #Genes/#Species 2316/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen01g030830.2

Descriptions

  • Description Encodes a member of the Squamosa Binding Protein family of transcriptional regulators. SPL7 is expressed highly in roots and appears to play a role in copper homeostasis. Mutants are hypersensitive to copper deficient conditions and display a retarded growth phenotype. SPL7 binds to the promoter of the copper responsive miRNAs miR398b and miR389c. | squamosa promoter binding protein-like 7 (SPL7) | FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity | INVOLVED IN: copper ion homeostasis, regulation of transcription | LOCATED IN: nucleus | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Transcription factor, SBP-box | BEST Arabidopsis thaliana protein match is: squamosa promoter binding protein-like 1 .
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
ISO
PLAZA Integrative Orthologyregulation of transcription, DNA-templated AT5G18830
GO:0035874
ISO
PLAZA Integrative Orthologycellular response to copper ion starvation AT5G18830
GO:0048638
ISO
PLAZA Integrative Orthologyregulation of developmental growth AT5G18830
GO:0055070
ISO
PLAZA Integrative Orthologycopper ion homeostasis AT5G18830

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G18830
GO:0042803
ISO
PLAZA Integrative Orthologyprotein homodimerization activity AT5G18830
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT5G18830

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
InterPronucleus
GO:0016607
ISO
PLAZA Integrative Orthologynuclear speck AT5G18830

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036893 SBP domain superfamily
IPR004333 SBP domain
IPR044817 Squamosa promoter-binding-like protein
Mapman id Description
15.5.18 RNA biosynthesis.transcriptional regulation.transcription factor (SBP)
25.4.3.1.1 Nutrient uptake.metal homeostasis.copper.regulation.copper homeostasis regulator (SPL7)