Gene: Solyc01g080670.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc01g080670.3
  • Transcript Identifier Solyc01g080670.3.1
  • Gene Type Coding gene
  • Location SL4.0ch01 : 72491189-72499281 : positive

Gene Family Information

  • ID HOM05D000159
  • #Genes/#Species 2316/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc01g080670.3.1
  • uniprot A0A3Q7EHP4
  • gene_id Solyc01g080670

Descriptions

  • Description Squamosa promoter binding protein 7
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
ISO
PLAZA Integrative Orthologyregulation of transcription, DNA-templated AT5G18830
GO:0035874
ISO
PLAZA Integrative Orthologycellular response to copper ion starvation AT5G18830
GO:0048638
ISO
PLAZA Integrative Orthologyregulation of developmental growth AT5G18830
GO:0055070
ISO
PLAZA Integrative Orthologycopper ion homeostasis AT5G18830

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G18830
GO:0042803
ISO
PLAZA Integrative Orthologyprotein homodimerization activity AT5G18830
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT5G18830

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IEA
InterPronucleus
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016020
IEA
GOA Databasemembrane
GO:0016607
ISO
PLAZA Integrative Orthologynuclear speck AT5G18830

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036893 SBP domain superfamily
IPR004333 SBP domain
IPR044817 Squamosa promoter-binding-like protein
Mapman id Description
15.5.18 RNA biosynthesis.transcriptional regulation.transcription factor (SBP)
25.4.3.1.1 Nutrient uptake.metal homeostasis.copper.regulation.copper homeostasis regulator (SPL7)