Gene: AT5G18830

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G18830
  • Transcript Identifier AT5G18830.1
  • Gene Type Coding gene
  • Location Chr5 : 6276116-6280227 : positive

Gene Family Information

  • ID HOM05D000159
  • #Genes/#Species 2316/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G18830.1
  • symbol SPL7
  • Alias ATSPL7,SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 7
  • uniprot Q8S9G8

Descriptions

  • Description squamosa promoter binding protein-like 7
  • Computational description squamosa promoter binding protein-like 7 (SPL7); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: copper ion homeostasis, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, SBP-box (InterPro:IPR004333); BEST Arabidopsis thaliana protein match is: squamosa promoter binding protein-like 1 (TAIR:AT2G47070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0048638
IMP
Gene Ontologyregulation of developmental growth1
GO:0035874
IMP
Gene Ontologycellular response to copper ion starvation1
GO:0006355
IDA, IPI
TAS
Gene Ontologyregulation of transcription, DNA-templated1 2 3
GO:0055070
IMP
Gene Ontologycopper ion homeostasis3

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IPI
Gene OntologyDNA binding3
GO:0003677
IEA
InterProDNA binding
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0000976
IPI
Gene Ontologytranscription cis-regulatory region binding4
GO:0042803
IDA
Gene Ontologyprotein homodimerization activity1
GO:0005515
IPI
Gene Ontologyprotein binding1
GO:0003700
ISS
Gene OntologyDNA-binding transcription factor activity2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016607
IEA
GOA Databasenuclear speck
GO:0016607
IDA
Gene Ontologynuclear speck1
GO:0005634
ISM
IEA
Gene Ontologynucleus
GO:0005634
IEA
InterPronucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR004333 SBP domain
IPR044817 Squamosa promoter-binding-like protein
IPR036893 SBP domain superfamily
Mapman id Description
15.5.18 RNA biosynthesis.transcriptional regulation.transcription factor (SBP)
25.4.3.1.1 Nutrient uptake.metal homeostasis.copper.regulation.copper homeostasis regulator (SPL7)