Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_006372 Vanilla planifolia HOM05D004330 ORTHO05D005182 1.8e-51 205.7 107 100.0
HPP92_006237 Vanilla planifolia HOM05D004330 ORTHO05D005182 5.1e-22 107.8 93 69.9
HPP92_006305 Vanilla planifolia HOM05D004330 ORTHO05D005182 5.1e-22 107.8 93 69.9
MSTRG.22475 Avicennia marina HOM05D004330 ORTHO05D005182 6.2e-20 100.9 93 59.1
CSS0031487 Camellia sinensis var. sinensis HOM05D004330 ORTHO05D005182 6.2e-20 100.9 93 62.4
Zm00001eb393130 Zea mays HOM05D004330 ORTHO05D005182 1.8e-19 99.4 93 62.4
CSS0001083 Camellia sinensis var. sinensis HOM05D004330 ORTHO05D005182 2.4e-19 99.0 93 61.3
Manes.15G103100 Manihot esculenta HOM05D004330 ORTHO05D005182 3.1e-19 98.6 102 55.9
Nitab4.5_0000079g0120 Nicotiana tabacum HOM05D004330 ORTHO05D005182 5.3e-19 97.8 93 61.3
Nitab4.5_0007117g0020 Nicotiana tabacum HOM05D004330 ORTHO05D005182 5.3e-19 97.8 93 61.3
Os03g0417900 Oryza sativa ssp. japonica HOM05D004330 ORTHO05D005182 5.3e-19 97.8 93 61.3
CiPaw.03G012300 Carya illinoinensis HOM05D004330 ORTHO05D005182 9.0e-19 97.1 92 60.9
Actinidia29358 Actinidia chinensis HOM05D004330 ORTHO05D005182 1.2e-18 96.7 93 59.1
CANSAT01G1169 Cannabis sativa HOM05D004330 ORTHO05D005182 1.2e-18 96.7 93 59.1
CDE03G0141 Ceratophyllum demersum HOM05D004330 ORTHO05D005182 1.2e-18 96.7 103 56.3
MD08G1244900 Malus domestica HOM05D004330 ORTHO05D005182 1.2e-18 96.7 93 58.1
Actinidia16901 Actinidia chinensis HOM05D004330 ORTHO05D005182 1.5e-18 96.3 93 59.1
THA.LOC104823378 Tarenaya hassleriana HOM05D004330 ORTHO05D005182 2.0e-18 95.9 93 57.0
unitig_37.g12692 Utricularia gibba HOM05D004330 ORTHO05D005182 2.0e-18 95.9 93 57.0
Carub.0002s1815 Capsella rubella HOM05D004330 ORTHO05D005182 3.4e-18 95.1 103 52.4
Oeu020638.1 Olea europaea HOM05D004330 ORTHO05D005182 3.4e-18 95.1 102 54.9
COL.COLO4_37491 Corchorus olitorius HOM05D004330 ORTHO05D005182 4.5e-18 94.7 93 54.8
FvH4_2g00140 Fragaria vesca HOM05D004330 ORTHO05D005182 4.5e-18 94.7 93 57.0
FAN24G1765 Fragaria x ananassa HOM05D004330 ORTHO05D005182 4.5e-18 94.7 93 57.0
Rhsim01G0101300 Rhododendron simsii HOM05D004330 ORTHO05D005182 4.5e-18 94.7 93 58.1
THA.LOC104803377 Tarenaya hassleriana HOM05D004330 ORTHO05D005182 4.5e-18 94.7 93 57.0
Cfa008036 Carpinus fangiana HOM05D004330 ORTHO05D005182 5.8e-18 94.4 93 59.1
vmacro06107 Vaccinium macrocarpon HOM05D004330 ORTHO05D005182 5.8e-18 94.4 82 65.9
vmacro23409 Vaccinium macrocarpon HOM05D004330 ORTHO05D005182 5.8e-18 94.4 82 65.9
Lsat_1_v5_gn_6_109860 Lactuca sativa HOM05D004330 ORTHO05D005182 7.6e-18 94.0 78 62.8
Thecc.08G188100 Theobroma cacao HOM05D004330 ORTHO05D005182 7.6e-18 94.0 93 54.8
BraA07t31323Z Brassica rapa HOM05D004330 ORTHO05D005182 9.9e-18 93.6 103 51.5
Dinv22060 Davidia involucrata HOM05D004330 ORTHO05D005182 9.9e-18 93.6 93 58.1
Thhalv10018205m.g Eutrema salsugineum HOM05D004330 ORTHO05D005182 9.9e-18 93.6 103 51.5
SalBow6G7193 Salvia bowleyana HOM05D004330 ORTHO05D005182 9.9e-18 93.6 93 58.1
Solyc02g094090.4 Solanum lycopersicum HOM05D004330 ORTHO05D005182 9.9e-18 93.6 93 59.1
Sopen02g038710 Solanum pennellii HOM05D004330 ORTHO05D005182 9.9e-18 93.6 93 59.1
TWI12G0377 Tripterygium wilfordii HOM05D004330 ORTHO05D005182 9.9e-18 93.6 94 54.3
FAN19G3045 Fragaria x ananassa HOM05D004330 ORTHO05D005182 1.3e-17 93.2 93 55.9
Peaxi162Scf00078g01141 Petunia axillaris HOM05D004330 ORTHO05D005182 1.3e-17 93.2 93 58.1
RcHm_v2.0_Chr6g0249411 Rosa chinensis HOM05D004330 ORTHO05D005182 1.3e-17 93.2 93 55.9
Cpa.g.sc249.10 Carica papaya HOM05D004330 ORTHO05D005182 1.7e-17 92.8 93 54.8
Haze_02242 Corylus avellana HOM05D004330 ORTHO05D005182 1.7e-17 92.8 88 60.2
Aqoxy5G00868 Aquilegia oxysepala HOM05D004330 ORTHO05D005182 2.2e-17 92.4 93 57.0
AL2G30885 Arabidopsis lyrata HOM05D004330 ORTHO05D005182 2.2e-17 92.4 103 50.5
A07p37610 Brassica napus HOM05D004330 ORTHO05D005182 2.2e-17 92.4 103 50.5
BolC6t39595H Brassica oleracea HOM05D004330 ORTHO05D005182 2.2e-17 92.4 103 50.5
CiPaw.04G008600 Carya illinoinensis HOM05D004330 ORTHO05D005182 2.2e-17 92.4 93 58.1
ECA246G0284 Erigeron canadensis HOM05D004330 ORTHO05D005182 2.2e-17 92.4 82 61.0
Eucgr.C04264 Eucalyptus grandis HOM05D004330 ORTHO05D005182 2.2e-17 92.4 94 54.3
Lj7C415G17 Lonicera japonica HOM05D004330 ORTHO05D005182 2.2e-17 92.4 78 64.1
MD15G1440000 Malus domestica HOM05D004330 ORTHO05D005182 2.2e-17 92.4 93 57.0
Sp5g26470 Schrenkiella parvula HOM05D004330 ORTHO05D005182 2.2e-17 92.4 103 50.5
Migut.C00321 Erythranthe guttata HOM05D004330 ORTHO05D005182 2.9e-17 92.0 93 57.0
Migut.G00904 Erythranthe guttata HOM05D004330 ORTHO05D005182 2.9e-17 92.0 93 57.0
Gohir.A05G251400 Gossypium hirsutum HOM05D004330 ORTHO05D005182 2.9e-17 92.0 93 54.8
Gohir.D05G252400 Gossypium hirsutum HOM05D004330 ORTHO05D005182 2.9e-17 92.0 93 54.8
Gorai.009G264800 Gossypium raimondii HOM05D004330 ORTHO05D005182 2.9e-17 92.0 93 54.8
Nitab4.5_0007150g0080 Nicotiana tabacum HOM05D004330 ORTHO05D005182 2.9e-17 92.0 93 58.1
Prupe.1G566400 Prunus persica HOM05D004330 ORTHO05D005182 2.9e-17 92.0 93 55.9
PGR031G1280 Punica granatum HOM05D004330 ORTHO05D005182 2.9e-17 92.0 93 57.0
Sabra06G0020300 Salix brachista HOM05D004330 ORTHO05D005182 2.9e-17 92.0 93 54.8
SalBow6G1408 Salvia bowleyana HOM05D004330 ORTHO05D005182 2.9e-17 92.0 93 57.0
Nn6g32085 Nelumbo nucifera HOM05D004330 ORTHO05D005182 3.8e-17 91.7 93 54.8
Potri.006G027100 Populus trichocarpa HOM05D004330 ORTHO05D005182 3.8e-17 91.7 93 54.8
Rhsim02G0174800 Rhododendron simsii HOM05D004330 ORTHO05D005182 3.8e-17 91.7 80 62.5
CAN.G473.93 Capsicum annuum HOM05D004330 ORTHO05D005182 4.9e-17 91.3 93 57.0
Glyma.03G252000 Glycine max HOM05D004330 ORTHO05D005182 4.9e-17 91.3 78 64.1
HanXRQChr05g0150611 Helianthus annuus HOM05D004330 ORTHO05D005182 4.9e-17 91.3 102 52.0
AT1G71270 Arabidopsis thaliana HOM05D004330 ORTHO05D005182 6.4e-17 90.9 94 52.1
BcaC08g46563 Brassica carinata HOM05D004330 ORTHO05D005182 6.4e-17 90.9 93 53.8
C06p45370 Brassica napus HOM05D004330 ORTHO05D005182 6.4e-17 90.9 93 53.8
Lalb_Chr04g0261991 Lupinus albus HOM05D004330 ORTHO05D005182 6.4e-17 90.9 93 57.0
Medtr1g079770 Medicago truncatula HOM05D004330 ORTHO05D005182 6.4e-17 90.9 78 62.8
VMungo0540G0979 Vigna mungo HOM05D004330 ORTHO05D005182 6.4e-17 90.9 78 64.1
GSVIVG01012102001 Vitis vinifera HOM05D004330 ORTHO05D005182 6.4e-17 90.9 93 55.9
Aa31LG4G9240 Aethionema arabicum HOM05D004330 ORTHO05D005182 8.4e-17 90.5 98 55.1
ATR0580G447 Amborella trichopoda HOM05D004330 ORTHO05D005182 8.4e-17 90.5 93 57.0
arahy.Tifrunner.gnm1.ann1.7LJM3H Arachis hypogaea HOM05D004330 ORTHO05D005182 8.4e-17 90.5 102 52.0
arahy.Tifrunner.gnm1.ann1.A4ASB6 Arachis hypogaea HOM05D004330 ORTHO05D005182 8.4e-17 90.5 102 52.0
arahy.Tifrunner.gnm1.ann1.KU2W2N Arachis hypogaea HOM05D004330 ORTHO05D005182 8.4e-17 90.5 102 52.0
BcaB03g14885 Brassica carinata HOM05D004330 ORTHO05D005182 8.4e-17 90.5 103 50.5
Ciclev10019077m.g Citrus clementina HOM05D004330 ORTHO05D005182 8.4e-17 90.5 102 51.0
Haze_02247 Corylus avellana HOM05D004330 ORTHO05D005182 8.4e-17 90.5 82 62.2
Nitab4.5_0002887g0010 Nicotiana tabacum HOM05D004330 ORTHO05D005182 8.4e-17 90.5 93 57.0
Phvul.006G106700 Phaseolus vulgaris HOM05D004330 ORTHO05D005182 8.4e-17 90.5 78 64.1
SGA_v2.0_scaffold227G43197 Striga asiatica HOM05D004330 ORTHO05D005182 8.4e-17 90.5 93 55.9
Ah.11g049400 Amaranthus hybridus HOM05D004330 ORTHO05D005182 1.1e-16 90.1 93 54.8
Hma1.2p1_0016F.1_g011010 Hydrangea macrophylla HOM05D004330 ORTHO05D005182 1.1e-16 90.1 93 54.8
Glyma.19G249400 Glycine max HOM05D004330 ORTHO05D005182 1.4e-16 89.7 78 62.8
CSS0008451 Camellia sinensis var. sinensis HOM05D004330 ORTHO05D005182 1.9e-16 89.4 93 54.8
Psat6g142240 Pisum sativum HOM05D004330 ORTHO05D005182 1.9e-16 89.4 78 62.8
COL.COLO4_00397 Corchorus olitorius HOM05D004330 ORTHO05D005182 2.4e-16 89.0 93 52.7
TAR628G0944 Trochodendron aralioides HOM05D004330 ORTHO05D005182 2.4e-16 89.0 93 53.8
QL09p001201 Quercus lobata HOM05D004330 ORTHO05D005182 3.2e-16 88.6 93 58.1
AUR62011839 Chenopodium quinoa HOM05D004330 ORTHO05D005182 4.2e-16 88.2 93 53.8
AUR62024682 Chenopodium quinoa HOM05D004330 ORTHO05D005182 4.2e-16 88.2 93 53.8
Cc10_g16170 Coffea canephora HOM05D004330 ORTHO05D005182 4.2e-16 88.2 93 52.7
AL2G30900 Arabidopsis lyrata HOM05D004330 ORTHO05D005182 5.5e-16 87.8 103 49.5
Ca_09987_v3 Cicer arietinum L. HOM05D004330 ORTHO05D005182 5.5e-16 87.8 78 61.5
DCAR_024855 Daucus carota HOM05D004330 ORTHO05D005182 5.5e-16 87.8 94 52.1
Lj5g0027584 Lotus japonicus HOM05D004330 ORTHO05D005182 5.5e-16 87.8 78 60.3
PSO210G1668 Papaver somniferum HOM05D004330 ORTHO05D005182 5.5e-16 87.8 102 52.0
TPR.G10262 Trifolium pratense HOM05D004330 ORTHO05D005182 5.5e-16 87.8 78 61.5
PSO761G0081 Papaver somniferum HOM05D004330 ORTHO05D005182 7.1e-16 87.4 102 52.0
Sed0024292 Sechium edule HOM05D004330 ORTHO05D005182 1.2e-15 86.7 78 61.5
Hund19537 Selenicereus undatus HOM05D004330 ORTHO05D005182 1.2e-15 86.7 93 53.8
Sc17g0000550 Simmondsia chinensis HOM05D004330 ORTHO05D005182 1.2e-15 86.7 82 59.8
MBI16_g41537_MAGBIO Magnolia biondii HOM05D004330 ORTHO05D005182 1.6e-15 86.3 93 53.8
CsaV3_2G033380 Cucumis sativus L. HOM05D004330 ORTHO05D005182 2.1e-15 85.9 78 60.3
AT1G71300 Arabidopsis thaliana HOM05D004330 ORTHO05D005182 2.7e-15 85.5 93 50.5
Carub.0002s1817 Capsella rubella HOM05D004330 ORTHO05D005182 3.5e-15 85.1 104 50.0
MELO3C008109.2 Cucumis melo HOM05D004330 ORTHO05D005182 3.5e-15 85.1 78 60.3
EL10As5g23498 Beta vulgaris HOM05D004330 ORTHO05D005182 6.0e-15 84.3 93 51.6
ClCG11G008260 Citrullus lanatus HOM05D004330 ORTHO05D005182 7.9e-15 84.0 76 60.5
Aqoxy2G00735 Aquilegia oxysepala HOM05D004330 ORTHO05D005182 3.0e-14 82.0 93 49.5
SEGI_21093 Sequoiadendron giganteum HOM05D004330 ORTHO05D005182 1.1e-13 80.1 77 55.8
MBI13_g40627_MAGBIO Magnolia biondii HOM05D004330 ORTHO05D005182 1.9e-13 79.3 67 61.2
Oeu028617.1 Olea europaea HOM05D004330 ORTHO05D005182 7.4e-13 77.4 77 58.4
SHI24508 Sapria himalayana HOM05D004330 ORTHO05D005182 1.6e-12 76.3 88 55.7
AagrBONN_evm.TU.Sc2ySwM_228.5612 Anthoceros agrestis HOM05D004330 ORTHO05D005182 2.1e-12 75.9 78 53.8
AagrBONN_evm.TU.Sc2ySwM_228.5613 Anthoceros agrestis HOM05D004330 ORTHO05D005182 2.1e-12 75.9 78 53.8
Mapoly0091s0001 Marchantia polymorpha HOM05D004330 ORTHO05D005182 2.1e-12 75.9 80 51.2
Pp3c4_27380 Physcomitrium patens HOM05D004330 ORTHO05D005182 3.7e-12 75.1 78 52.6
SMO304G0018 Selaginella moellendorffii HOM05D004330 ORTHO05D005182 3.7e-12 75.1 78 52.6
Os10g0488300 Oryza sativa ssp. japonica HOM05D004330 ORTHO05D005182 1.3e-09 66.6 97 40.2
Duzib177G1138 Durio zibethinus HOM05D004330 ORTHO05D005182 2.9e-09 65.5 111 40.5
Zm00001eb045280 Zea mays HOM05D004330 ORTHO05D005182 2.5e-08 62.4 97 39.2


User provided reference genes

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