Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_006236 Vanilla planifolia HOM05D004330 ORTHO05D005182 3.5e-25 117.5 58 100.0
HPP92_006305 Vanilla planifolia HOM05D004330 ORTHO05D005182 4.6e-25 117.1 57 100.0
Atru.chr13.2589 Acer truncatum HOM05D004330 ORTHO05D005182 2.1e-22 108.2 57 91.2
Ah.11g049400 Amaranthus hybridus HOM05D004330 ORTHO05D005182 2.1e-22 108.2 57 89.5
EL10As5g23498 Beta vulgaris HOM05D004330 ORTHO05D005182 2.1e-22 108.2 57 89.5
Ciclev10019077m.g Citrus clementina HOM05D004330 ORTHO05D005182 2.1e-22 108.2 57 91.2
TWI12G0377 Tripterygium wilfordii HOM05D004330 ORTHO05D005182 2.1e-22 108.2 57 89.5
PGR031G1280 Punica granatum HOM05D004330 ORTHO05D005182 3.6e-22 107.5 57 89.5
THA.LOC104803377 Tarenaya hassleriana HOM05D004330 ORTHO05D005182 3.6e-22 107.5 57 91.2
AUR62011839 Chenopodium quinoa HOM05D004330 ORTHO05D005182 4.7e-22 107.1 57 87.7
AUR62024682 Chenopodium quinoa HOM05D004330 ORTHO05D005182 4.7e-22 107.1 57 87.7
Eucgr.C04264 Eucalyptus grandis HOM05D004330 ORTHO05D005182 4.7e-22 107.1 57 87.7
Hund19537 Selenicereus undatus HOM05D004330 ORTHO05D005182 4.7e-22 107.1 57 87.7
ATR0580G447 Amborella trichopoda HOM05D004330 ORTHO05D005182 6.2e-22 106.7 57 89.5
Carub.0002s1817 Capsella rubella HOM05D004330 ORTHO05D005182 6.2e-22 106.7 57 89.5
Cc10_g16170 Coffea canephora HOM05D004330 ORTHO05D005182 6.2e-22 106.7 57 87.7
Hma1.2p1_0016F.1_g011010 Hydrangea macrophylla HOM05D004330 ORTHO05D005182 6.2e-22 106.7 57 87.7
Lsat_1_v5_gn_6_109860 Lactuca sativa HOM05D004330 ORTHO05D005182 6.2e-22 106.7 57 86.0
Nn6g32085 Nelumbo nucifera HOM05D004330 ORTHO05D005182 6.2e-22 106.7 57 89.5
Oeu020638.1 Olea europaea HOM05D004330 ORTHO05D005182 6.2e-22 106.7 57 87.7
TAR628G0944 Trochodendron aralioides HOM05D004330 ORTHO05D005182 6.2e-22 106.7 57 89.5
Lj7C415G17 Lonicera japonica HOM05D004330 ORTHO05D005182 8.0e-22 106.3 57 86.0
Duzib177G1138 Durio zibethinus HOM05D004330 ORTHO05D005182 1.0e-21 105.9 57 87.7
Manes.15G103100 Manihot esculenta HOM05D004330 ORTHO05D005182 1.0e-21 105.9 57 87.7
CDE03G0141 Ceratophyllum demersum HOM05D004330 ORTHO05D005182 1.4e-21 105.5 57 87.7
COL.COLO4_33595 Corchorus olitorius HOM05D004330 ORTHO05D005182 1.4e-21 105.5 57 86.0
COL.COLO4_37491 Corchorus olitorius HOM05D004330 ORTHO05D005182 1.4e-21 105.5 57 86.0
Gohir.A05G251400 Gossypium hirsutum HOM05D004330 ORTHO05D005182 1.4e-21 105.5 57 86.0
Gohir.D05G252400 Gossypium hirsutum HOM05D004330 ORTHO05D005182 1.4e-21 105.5 57 86.0
Gorai.009G264800 Gossypium raimondii HOM05D004330 ORTHO05D005182 1.4e-21 105.5 57 86.0
Potri.006G027100 Populus trichocarpa HOM05D004330 ORTHO05D005182 1.4e-21 105.5 57 86.0
SEGI_21093 Sequoiadendron giganteum HOM05D004330 ORTHO05D005182 1.4e-21 105.5 57 87.7
Thecc.08G188100 Theobroma cacao HOM05D004330 ORTHO05D005182 1.4e-21 105.5 57 86.0
Actinidia16901 Actinidia chinensis HOM05D004330 ORTHO05D005182 1.8e-21 105.1 57 86.0
Actinidia29358 Actinidia chinensis HOM05D004330 ORTHO05D005182 1.8e-21 105.1 57 86.0
CSS0001083 Camellia sinensis var. sinensis HOM05D004330 ORTHO05D005182 1.8e-21 105.1 57 86.0
Dinv22060 Davidia involucrata HOM05D004330 ORTHO05D005182 1.8e-21 105.1 57 86.0
MBI16_g23303_MAGBIO Magnolia biondii HOM05D004330 ORTHO05D005182 1.8e-21 105.1 57 87.7
Nitab4.5_0002887g0010 Nicotiana tabacum HOM05D004330 ORTHO05D005182 1.8e-21 105.1 57 86.0
PSO210G1668 Papaver somniferum HOM05D004330 ORTHO05D005182 1.8e-21 105.1 57 87.7
PSO761G0081 Papaver somniferum HOM05D004330 ORTHO05D005182 1.8e-21 105.1 57 87.7
CSS0008451 Camellia sinensis var. sinensis HOM05D004330 ORTHO05D005182 2.3e-21 104.8 57 86.0
ECA246G0284 Erigeron canadensis HOM05D004330 ORTHO05D005182 2.3e-21 104.8 57 84.2
HanXRQChr05g0150611 Helianthus annuus HOM05D004330 ORTHO05D005182 2.3e-21 104.8 57 84.2
Lalb_Chr04g0261991 Lupinus albus HOM05D004330 ORTHO05D005182 2.3e-21 104.8 57 87.7
Medtr1g079770 Medicago truncatula HOM05D004330 ORTHO05D005182 2.3e-21 104.8 57 87.7
Ca_09987_v3 Cicer arietinum L. HOM05D004330 ORTHO05D005182 3.1e-21 104.4 57 87.7
DCAR_024855 Daucus carota HOM05D004330 ORTHO05D005182 3.1e-21 104.4 57 84.2
AT1G71270 Arabidopsis thaliana HOM05D004330 ORTHO05D005182 4.0e-21 104.0 57 86.0
Cfa008036 Carpinus fangiana HOM05D004330 ORTHO05D005182 4.0e-21 104.0 57 86.0
CiPaw.04G008600 Carya illinoinensis HOM05D004330 ORTHO05D005182 4.0e-21 104.0 57 86.0
ClCG11G008260 Citrullus lanatus HOM05D004330 ORTHO05D005182 4.0e-21 104.0 57 86.0
Haze_02242 Corylus avellana HOM05D004330 ORTHO05D005182 4.0e-21 104.0 57 86.0
CsaV3_2G033380 Cucumis sativus L. HOM05D004330 ORTHO05D005182 4.0e-21 104.0 57 86.0
QL09p001201 Quercus lobata HOM05D004330 ORTHO05D005182 4.0e-21 104.0 57 86.0
Aa31LG4G9240 Aethionema arabicum HOM05D004330 ORTHO05D005182 5.2e-21 103.6 57 86.0
AL2G30885 Arabidopsis lyrata HOM05D004330 ORTHO05D005182 5.2e-21 103.6 57 86.0
BcaB03g14885 Brassica carinata HOM05D004330 ORTHO05D005182 5.2e-21 103.6 57 86.0
Thhalv10018205m.g Eutrema salsugineum HOM05D004330 ORTHO05D005182 5.2e-21 103.6 57 86.0
Glyma.19G249400 Glycine max HOM05D004330 ORTHO05D005182 5.2e-21 103.6 57 86.0
Lj5g0027584 Lotus japonicus HOM05D004330 ORTHO05D005182 5.2e-21 103.6 57 86.0
Os03g0417900 Oryza sativa ssp. japonica HOM05D004330 ORTHO05D005182 5.2e-21 103.6 57 87.7
SHI24508 Sapria himalayana HOM05D004330 ORTHO05D005182 5.2e-21 103.6 57 86.0
Sp5g26470 Schrenkiella parvula HOM05D004330 ORTHO05D005182 5.2e-21 103.6 57 86.0
Sc17g0000550 Simmondsia chinensis HOM05D004330 ORTHO05D005182 5.2e-21 103.6 57 84.2
Carub.0002s1815 Capsella rubella HOM05D004330 ORTHO05D005182 6.8e-21 103.2 57 86.0
Nitab4.5_0007117g0020 Nicotiana tabacum HOM05D004330 ORTHO05D005182 6.8e-21 103.2 57 84.2
Sabra06G0020300 Salix brachista HOM05D004330 ORTHO05D005182 6.8e-21 103.2 57 84.2
Cpa.g.sc249.10 Carica papaya HOM05D004330 ORTHO05D005182 8.9e-21 102.8 57 86.0
FAN19G3045 Fragaria x ananassa HOM05D004330 ORTHO05D005182 8.9e-21 102.8 57 86.0
SMO304G0018 Selaginella moellendorffii HOM05D004330 ORTHO05D005182 8.9e-21 102.8 57 82.5
THA.LOC104823378 Tarenaya hassleriana HOM05D004330 ORTHO05D005182 8.9e-21 102.8 57 86.0
MSTRG.22475 Avicennia marina HOM05D004330 ORTHO05D005182 1.2e-20 102.4 57 84.2
BcaC08g46563 Brassica carinata HOM05D004330 ORTHO05D005182 1.2e-20 102.4 57 84.2
A07p37610 Brassica napus HOM05D004330 ORTHO05D005182 1.2e-20 102.4 57 84.2
C06p45370 Brassica napus HOM05D004330 ORTHO05D005182 1.2e-20 102.4 57 84.2
BolC6t39595H Brassica oleracea HOM05D004330 ORTHO05D005182 1.2e-20 102.4 57 84.2
BraA07t31323Z Brassica rapa HOM05D004330 ORTHO05D005182 1.2e-20 102.4 57 84.2
Phvul.006G106700 Phaseolus vulgaris HOM05D004330 ORTHO05D005182 1.2e-20 102.4 57 86.0
Psat6g142240 Pisum sativum HOM05D004330 ORTHO05D005182 1.2e-20 102.4 57 86.0
vmacro06107 Vaccinium macrocarpon HOM05D004330 ORTHO05D005182 1.2e-20 102.4 57 84.2
vmacro23409 Vaccinium macrocarpon HOM05D004330 ORTHO05D005182 1.2e-20 102.4 57 84.2
GSVIVG01012102001 Vitis vinifera HOM05D004330 ORTHO05D005182 1.2e-20 102.4 57 84.2
Aqoxy5G00868 Aquilegia oxysepala HOM05D004330 ORTHO05D005182 2.0e-20 101.7 57 84.2
AL2G30900 Arabidopsis lyrata HOM05D004330 ORTHO05D005182 2.0e-20 101.7 57 84.2
AT1G71300 Arabidopsis thaliana HOM05D004330 ORTHO05D005182 2.0e-20 101.7 57 84.2
CAN.G473.93 Capsicum annuum HOM05D004330 ORTHO05D005182 2.0e-20 101.7 57 82.5
Glyma.03G252000 Glycine max HOM05D004330 ORTHO05D005182 2.0e-20 101.7 57 84.2
Solyc02g094090.4 Solanum lycopersicum HOM05D004330 ORTHO05D005182 2.0e-20 101.7 57 82.5
Sopen02g038710 Solanum pennellii HOM05D004330 ORTHO05D005182 2.0e-20 101.7 57 82.5
CiPaw.03G012300 Carya illinoinensis HOM05D004330 ORTHO05D005182 2.6e-20 101.3 57 82.5
FvH4_2g00140 Fragaria vesca HOM05D004330 ORTHO05D005182 2.6e-20 101.3 57 84.2
FAN24G1765 Fragaria x ananassa HOM05D004330 ORTHO05D005182 2.6e-20 101.3 57 84.2
Nitab4.5_0000079g0120 Nicotiana tabacum HOM05D004330 ORTHO05D005182 2.6e-20 101.3 57 82.5
RcHm_v2.0_Chr6g0249411 Rosa chinensis HOM05D004330 ORTHO05D005182 2.6e-20 101.3 57 84.2
Sed0024292 Sechium edule HOM05D004330 ORTHO05D005182 2.6e-20 101.3 57 86.0
VMungo0540G0979 Vigna mungo HOM05D004330 ORTHO05D005182 2.6e-20 101.3 57 86.0
Rhsim01G0101300 Rhododendron simsii HOM05D004330 ORTHO05D005182 3.4e-20 100.9 57 82.5
TPR.G10262 Trifolium pratense HOM05D004330 ORTHO05D005182 3.4e-20 100.9 57 86.0
SalBow6G1408 Salvia bowleyana HOM05D004330 ORTHO05D005182 4.4e-20 100.5 57 84.2
SalBow6G7193 Salvia bowleyana HOM05D004330 ORTHO05D005182 4.4e-20 100.5 57 84.2
CANSAT01G1169 Cannabis sativa HOM05D004330 ORTHO05D005182 7.5e-20 99.8 57 80.7
MD08G1244900 Malus domestica HOM05D004330 ORTHO05D005182 7.5e-20 99.8 57 82.5
Prupe.1G566400 Prunus persica HOM05D004330 ORTHO05D005182 7.5e-20 99.8 57 82.5
Peaxi162Scf00078g01141 Petunia axillaris HOM05D004330 ORTHO05D005182 9.8e-20 99.4 57 80.7
arahy.Tifrunner.gnm1.ann1.7LJM3H Arachis hypogaea HOM05D004330 ORTHO05D005182 1.3e-19 99.0 57 82.5
arahy.Tifrunner.gnm1.ann1.A4ASB6 Arachis hypogaea HOM05D004330 ORTHO05D005182 1.3e-19 99.0 57 82.5
arahy.Tifrunner.gnm1.ann1.KU2W2N Arachis hypogaea HOM05D004330 ORTHO05D005182 1.3e-19 99.0 57 82.5
CBR_g54934 Chara braunii HOM05D004330 ORTHO05D005182 1.3e-19 99.0 58 77.6
Migut.G00904 Erythranthe guttata HOM05D004330 ORTHO05D005182 1.7e-19 98.6 57 80.7
Zm00001eb393130 Zea mays HOM05D004330 ORTHO05D005182 1.7e-19 98.6 57 84.2
Aqoxy2G00735 Aquilegia oxysepala HOM05D004330 ORTHO05D005182 2.2e-19 98.2 57 78.9
unitig_37.g12692 Utricularia gibba HOM05D004330 ORTHO05D005182 2.9e-19 97.8 57 77.2
AagrBONN_evm.TU.Sc2ySwM_228.5612 Anthoceros agrestis HOM05D004330 ORTHO05D005182 3.7e-19 97.4 57 77.2
AagrBONN_evm.TU.Sc2ySwM_228.5613 Anthoceros agrestis HOM05D004330 ORTHO05D005182 3.7e-19 97.4 57 77.2
MD15G1440000 Malus domestica HOM05D004330 ORTHO05D005182 3.7e-19 97.4 57 80.7
Mapoly0091s0001 Marchantia polymorpha HOM05D004330 ORTHO05D005182 8.3e-19 96.3 57 73.7
Nitab4.5_0007150g0080 Nicotiana tabacum HOM05D004330 ORTHO05D005182 4.1e-18 94.0 66 71.2
MELO3C008109.2 Cucumis melo HOM05D004330 ORTHO05D005182 9.2e-18 92.8 75 65.3
Pp3c4_27380 Physcomitrium patens HOM05D004330 ORTHO05D005182 9.2e-18 92.8 57 71.9
Zm00001eb045280 Zea mays HOM05D004330 ORTHO05D005182 1.2e-14 82.4 57 61.4
Os10g0488300 Oryza sativa ssp. japonica HOM05D004330 ORTHO05D005182 3.6e-14 80.9 57 59.6
Cre08.g367200 Chlamydomonas reinhardtii HOM05D004330 ORTHO05D005182 2.6e-12 74.7 52 57.7
MBI13_g40628_MAGBIO Magnolia biondii HOM05D004330 ORTHO05D005182 5.8e-12 73.6 39 87.2
Zm00001eb371470 Zea mays HOM05D003702 ORTHO05D004653 9.8e-12 72.8 40 87.5
Zm00001eb294100 Zea mays HOM05D003702 ORTHO05D004653 1.7e-11 72.0 41 82.9
Zm00001eb378040 Zea mays HOM05D004330 ORTHO05D000629 4.9e-11 70.5 39 87.2
C06p46260 Brassica napus HOM05D004330 ORTHO05D005182 7.1e-10 66.6 41 78.0
C06p46170 Brassica napus HOM05D004330 ORTHO05D005182 1.2e-09 65.9 39 82.1
C06p46210 Brassica napus HOM05D004330 ORTHO05D005182 1.2e-09 65.9 39 82.1
PRCOL_00005416 Prasinoderma coloniale HOM05D004330 ORTHO05D005182 2.7e-09 64.7 53 50.9
MCO11G104 Micromonas commoda HOM05D004330 ORTHO05D005182 2.5e-07 58.2 58 48.3


User provided reference genes

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