Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_001561 Vanilla planifolia HOM05D003704 ORTHO05D005892 8.0e-94 347.1 171 100.0
TAR628G1325 Trochodendron aralioides HOM05D003704 ORTHO05D005892 1.2e-60 236.9 165 72.7
Hund15714 Selenicereus undatus HOM05D003704 ORTHO05D005892 9.8e-60 233.8 164 70.7
Cfa010865 Carpinus fangiana HOM05D003704 ORTHO05D005892 1.3e-59 233.4 164 71.3
CiPaw.13G011100 Carya illinoinensis HOM05D003704 ORTHO05D005892 2.9e-59 232.3 164 69.5
ClCG05G020780 Citrullus lanatus HOM05D003704 ORTHO05D005892 2.9e-59 232.3 164 70.1
Nitab4.5_0001888g0060 Nicotiana tabacum HOM05D003704 ORTHO05D005892 3.7e-59 231.9 169 69.2
Nitab4.5_0000316g0110 Nicotiana tabacum HOM05D003704 ORTHO05D005892 8.3e-59 230.7 169 68.6
THA.LOC104801743 Tarenaya hassleriana HOM05D003704 ORTHO05D005892 1.4e-58 229.9 166 69.3
Haze_03082 Corylus avellana HOM05D003704 ORTHO05D005892 2.4e-58 229.2 164 70.1
MELO3C012449.2 Cucumis melo HOM05D003704 ORTHO05D005892 2.4e-58 229.2 164 68.9
Actinidia21525 Actinidia chinensis HOM05D003704 ORTHO05D005892 3.2e-58 228.8 164 68.9
CsaV3_5G036520 Cucumis sativus L. HOM05D003704 ORTHO05D005892 3.2e-58 228.8 164 68.9
AT2G38770 Arabidopsis thaliana HOM05D003704 ORTHO05D005892 4.1e-58 228.4 165 70.9
Carub.0004s2079 Capsella rubella HOM05D003704 ORTHO05D005892 4.1e-58 228.4 165 70.9
Sc11g0006670 Simmondsia chinensis HOM05D003704 ORTHO05D005892 4.1e-58 228.4 167 67.7
AL4G36070 Arabidopsis lyrata HOM05D003704 ORTHO05D005892 5.4e-58 228.0 165 70.9
Ciclev10030496m.g Citrus clementina HOM05D003704 ORTHO05D005892 5.4e-58 228.0 165 72.1
Sp4g21160 Schrenkiella parvula HOM05D003704 ORTHO05D005892 5.4e-58 228.0 165 70.3
CDE02G2053 Ceratophyllum demersum HOM05D003704 ORTHO05D005892 7.1e-58 227.6 166 67.5
Thhalv10016138m.g Eutrema salsugineum HOM05D003704 ORTHO05D005892 7.1e-58 227.6 165 70.3
CSS0035088 Camellia sinensis var. sinensis HOM05D003704 ORTHO05D005892 9.2e-58 227.3 164 67.7
Rhsim01G0123500 Rhododendron simsii HOM05D003704 ORTHO05D005892 1.2e-57 226.9 173 66.5
Cc02_g29160 Coffea canephora HOM05D003704 ORTHO05D005892 1.6e-57 226.5 166 68.7
Manes.04G164800 Manihot esculenta HOM05D003704 ORTHO05D005892 1.6e-57 226.5 166 68.1
MBI05_g32455_MAGBIO Magnolia biondii HOM05D003704 ORTHO05D005892 2.1e-57 226.1 164 68.3
CAN.G1571.5 Capsicum annuum HOM05D003704 ORTHO05D005892 2.7e-57 225.7 164 70.7
Nn5g29073 Nelumbo nucifera HOM05D003704 ORTHO05D005892 4.6e-57 224.9 165 69.7
CARHR133480 Cardamine hirsuta HOM05D003704 ORTHO05D005892 1.0e-56 223.8 165 70.9
Solyc01g068480.4 Solanum lycopersicum HOM05D003704 ORTHO05D005892 1.0e-56 223.8 175 66.9
Sopen01g030440 Solanum pennellii HOM05D003704 ORTHO05D005892 1.0e-56 223.8 175 66.9
Eucgr.G03254 Eucalyptus grandis HOM05D003704 ORTHO05D005892 1.3e-56 223.4 173 66.5
BcaB02g09152 Brassica carinata HOM05D003704 ORTHO05D005892 1.7e-56 223.0 164 67.7
EL10Ac2g02849 Beta vulgaris HOM05D003704 ORTHO05D005892 2.3e-56 222.6 166 67.5
Aa31LG5G20910 Aethionema arabicum HOM05D003704 ORTHO05D005892 5.1e-56 221.5 165 67.9
Lj2A1006G35 Lonicera japonica HOM05D003704 ORTHO05D005892 6.6e-56 221.1 166 68.7
Migut.N01826 Erythranthe guttata HOM05D003704 ORTHO05D005892 1.1e-55 220.3 166 68.1
Lsat_1_v5_gn_4_29820 Lactuca sativa HOM05D003704 ORTHO05D005892 1.1e-55 220.3 169 67.5
TWI15G0657 Tripterygium wilfordii HOM05D003704 ORTHO05D005892 1.1e-55 220.3 166 67.5
Dinv32045 Davidia involucrata HOM05D003704 ORTHO05D005892 1.5e-55 219.9 167 69.5
QL04p013824 Quercus lobata HOM05D003704 ORTHO05D005892 1.5e-55 219.9 171 65.5
Sabra03G0148800 Salix brachista HOM05D003704 ORTHO05D005892 1.9e-55 219.5 175 66.3
Migut.O00529 Erythranthe guttata HOM05D003704 ORTHO05D005892 2.5e-55 219.2 166 67.5
Lalb_Chr17g0337761 Lupinus albus HOM05D003704 ORTHO05D005892 2.5e-55 219.2 167 67.7
Atru.chr11.2463 Acer truncatum HOM05D003704 ORTHO05D005892 3.3e-55 218.8 164 68.9
PGR142G1874 Punica granatum HOM05D003704 ORTHO05D005892 4.3e-55 218.4 165 66.7
GSVIVG01029933001 Vitis vinifera HOM05D003704 ORTHO05D005892 4.3e-55 218.4 165 67.3
ATR0564G498 Amborella trichopoda HOM05D003704 ORTHO05D005892 5.6e-55 218.0 167 67.1
PSO541G6018 Papaver somniferum HOM05D003704 ORTHO05D005892 5.6e-55 218.0 164 63.4
AUR62026830 Chenopodium quinoa HOM05D003704 ORTHO05D005892 7.3e-55 217.6 165 65.5
vmacro12686 Vaccinium macrocarpon HOM05D003704 ORTHO05D005892 7.3e-55 217.6 173 64.2
Atru.chr11.2491 Acer truncatum HOM05D003704 ORTHO05D005892 9.5e-55 217.2 164 68.3
Cpa.g.sc2782.1 Carica papaya HOM05D003704 ORTHO05D005892 1.2e-54 216.9 165 67.9
Glyma.09G285300 Glycine max HOM05D003704 ORTHO05D005892 1.2e-54 216.9 166 66.9
HanXRQChr17g0564051 Helianthus annuus HOM05D003704 ORTHO05D005892 1.2e-54 216.9 167 65.9
PSO781G0253 Papaver somniferum HOM05D003704 ORTHO05D005892 1.6e-54 216.5 164 62.8
Potri.003G201200 Populus trichocarpa HOM05D003704 ORTHO05D005892 1.6e-54 216.5 176 65.9
AUR62037223 Chenopodium quinoa HOM05D003704 ORTHO05D005892 2.1e-54 216.1 165 64.8
Sed0025295 Sechium edule HOM05D003704 ORTHO05D005892 2.1e-54 216.1 164 66.5
ECA234G1951 Erigeron canadensis HOM05D003704 ORTHO05D005892 2.8e-54 215.7 168 65.5
RcHm_v2.0_Chr1g0319731 Rosa chinensis HOM05D003704 ORTHO05D005892 2.8e-54 215.7 166 68.7
Glyma.20G000700 Glycine max HOM05D003704 ORTHO05D005892 4.7e-54 214.9 164 67.1
arahy.Tifrunner.gnm1.ann1.RZB3JM Arachis hypogaea HOM05D003704 ORTHO05D005892 6.2e-54 214.5 164 65.9
MSTRG.28042 Avicennia marina HOM05D003704 ORTHO05D005892 6.2e-54 214.5 165 67.3
FAN03G0678 Fragaria x ananassa HOM05D003704 ORTHO05D005892 6.2e-54 214.5 165 66.7
Medtr1g038815 Medicago truncatula HOM05D003704 ORTHO05D005892 6.2e-54 214.5 167 66.5
Prupe.2G030100 Prunus persica HOM05D003704 ORTHO05D005892 6.2e-54 214.5 165 67.3
GSVIVG01000835001 Vitis vinifera HOM05D003704 ORTHO05D005892 8.1e-54 214.2 164 64.0
DCAR_003239 Daucus carota HOM05D003704 ORTHO05D005892 1.1e-53 213.8 164 65.9
FAN10G3548 Fragaria x ananassa HOM05D003704 ORTHO05D005892 1.8e-53 213.0 165 66.7
SGA_v2.0_scaffold5G02930 Striga asiatica HOM05D003704 ORTHO05D005892 3.1e-53 212.2 167 68.3
BraA05t19706Z Brassica rapa HOM05D003704 ORTHO05D005892 6.8e-53 211.1 164 65.9
Phvul.003G001700 Phaseolus vulgaris HOM05D003704 ORTHO05D005892 6.8e-53 211.1 164 66.5
arahy.Tifrunner.gnm1.ann1.75MG08 Arachis hypogaea HOM05D003704 ORTHO05D005892 8.9e-53 210.7 164 64.6
BolC4t22475H Brassica oleracea HOM05D003704 ORTHO05D005892 8.9e-53 210.7 164 65.9
Psat4g010680 Pisum sativum HOM05D003704 ORTHO05D005892 8.9e-53 210.7 166 65.1
Ca_12375_v3 Cicer arietinum L. HOM05D003704 ORTHO05D005892 1.5e-52 209.9 167 66.5
A05p07400 Brassica napus HOM05D003704 ORTHO05D005892 2.6e-52 209.1 164 65.2
MD07G1033300 Malus domestica HOM05D003704 ORTHO05D005892 3.4e-52 208.8 165 66.1
MD02G1293500 Malus domestica HOM05D003704 ORTHO05D005892 4.4e-52 208.4 165 64.2
Gohir.D08G245550 Gossypium hirsutum HOM05D003704 ORTHO05D005892 5.8e-52 208.0 170 65.9
Gorai.004G262000 Gossypium raimondii HOM05D003704 ORTHO05D005892 5.8e-52 208.0 170 65.9
FAN01G0955 Fragaria x ananassa HOM05D003704 ORTHO05D005892 7.6e-52 207.6 165 64.2
VMungo0251G0473 Vigna mungo HOM05D003704 ORTHO05D005892 9.9e-52 207.2 167 65.9
CANSAT64G2305 Cannabis sativa HOM05D003704 ORTHO05D005892 1.3e-51 206.8 166 64.5
Ah.12g065080 Amaranthus hybridus HOM05D003704 ORTHO05D005892 1.7e-51 206.5 164 62.8
COL.COLO4_37421 Corchorus olitorius HOM05D003704 ORTHO05D005892 2.2e-51 206.1 170 64.1
Oeu003918.1 Olea europaea HOM05D003704 ORTHO05D005892 8.3e-51 204.1 212 54.7
C04p08870 Brassica napus HOM05D003704 ORTHO05D005892 1.1e-50 203.8 164 64.0
Thecc.05G198600 Theobroma cacao HOM05D003704 ORTHO05D005892 2.4e-50 202.6 168 64.3
BcaC02g07445 Brassica carinata HOM05D003704 ORTHO05D005892 3.2e-50 202.2 165 63.6
BolC4t28191H Brassica oleracea HOM05D003704 ORTHO05D005892 3.2e-50 202.2 165 63.6
Lj2g0008107 Lotus japonicus HOM05D003704 ORTHO05D005892 4.1e-50 201.8 170 62.4
Aqoxy1G04161 Aquilegia oxysepala HOM05D003704 ORTHO05D005892 9.2e-50 200.7 165 64.8
C04p66890 Brassica napus HOM05D003704 ORTHO05D005892 9.2e-50 200.7 165 63.6
Duzib128G1318 Durio zibethinus HOM05D003704 ORTHO05D005892 9.2e-50 200.7 170 64.7
BraA04t18425Z Brassica rapa HOM05D003704 ORTHO05D005892 1.2e-49 200.3 167 62.3
Zm00001eb018810 Zea mays HOM05D003704 ORTHO05D005892 1.2e-49 200.3 165 62.4
FvH4_7g02390 Fragaria vesca HOM05D003704 ORTHO05D005892 4.6e-49 198.4 165 63.6
FAN06G0794 Fragaria x ananassa HOM05D003704 ORTHO05D005892 4.6e-49 198.4 165 63.6
TPR.G35533 Trifolium pratense HOM05D003704 ORTHO05D005892 2.3e-48 196.1 166 62.7
SHI03978 Sapria himalayana HOM05D006558 ORTHO05D005892 6.6e-48 194.5 164 61.6
Peaxi162Scf00309g00333 Petunia axillaris HOM05D003704 ORTHO05D005892 5.6e-47 191.4 175 59.4
unitig_21.g20278 Utricularia gibba HOM05D003704 ORTHO05D005892 7.3e-47 191.0 164 60.4
Gohir.A08G225100 Gossypium hirsutum HOM05D003704 ORTHO05D005892 2.2e-43 179.5 152 65.8
PSO781G0329 Papaver somniferum HOM05D003704 ORTHO05D005892 7.8e-41 171.0 167 53.3
Mapoly0170s0020 Marchantia polymorpha HOM05D003704 ORTHO05D005892 2.5e-39 166.0 164 54.3
SEGI_24800 Sequoiadendron giganteum HOM05D003704 ORTHO05D005892 3.3e-39 165.6 157 56.7
RcHm_v2.0_Chr1g0320051 Rosa chinensis HOM05D003704 ORTHO05D005892 3.6e-38 162.2 145 63.4
Psat6g100680 Pisum sativum HOM05D003704 ORTHO05D005892 1.2e-36 157.1 166 54.8
CBR_g49869 Chara braunii HOM05D003704 ORTHO05D005892 4.9e-35 151.8 126 63.5
AagrBONN_evm.TU.Sc2ySwM_344.1100 Anthoceros agrestis HOM05D003704 ORTHO05D005892 1.9e-34 149.8 132 59.8
Cre06.g300750 Chlamydomonas reinhardtii HOM05D003704 ORTHO05D005892 3.6e-30 135.6 137 52.6
SMO230G0016 Selaginella moellendorffii HOM05D003704 ORTHO05D005892 4.6e-25 118.6 95 56.8
Psat5g110280 Pisum sativum HOM05D003704 ORTHO05D005892 5.1e-24 115.2 71 74.6
Pp3c21_9820 Physcomitrium patens HOM05D003704 ORTHO05D005892 7.4e-23 111.3 117 51.3
BcaNung07214 Brassica carinata HOM05D003704 ORTHO05D005892 9.6e-23 110.9 58 82.8
Lalb_Chr10g0094791 Lupinus albus HOM05D003704 ORTHO05D028681 1.4e-18 97.1 58 77.6
SGA_v2.0_scaffold354G49736 Striga asiatica HOM05D003704 ORTHO05D005892 4.1e-13 79.0 189 34.9
RcHm_v2.0_Chr1g0320091 Rosa chinensis HOM05D003704 ORTHO05D017707 9.0e-13 77.8 71 56.3
Gorai.010G147800 Gossypium raimondii HOM05D003704 ORTHO05D005892 1.2e-12 77.4 40 92.5
MCO01G629 Micromonas commoda HOM05D003704 ORTHO05D005892 2.6e-12 76.3 79 43.0
RcHm_v2.0_Chr1g0320421 Rosa chinensis HOM05D003704 ORTHO05D017707 2.6e-12 76.3 76 52.6
QL01p034783 Quercus lobata HOM05D003704 ORTHO05D005892 5.0e-11 72.0 45 75.6
CARHR288720 Cardamine hirsuta HOM05D003704 ORTHO05D005892 8.4e-11 71.2 123 37.4
Aqoxy263s005 Aquilegia oxysepala HOM05D003704 ORTHO05D005892 2.8e-06 56.2 31 80.6
Cfa026287 Carpinus fangiana HOM05D003704 ORTHO05D005892 6.3e-06 55.1 140 29.3


User provided reference genes

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