Gene: COL.COLO4_37421

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_37421
  • Transcript Identifier COL.rna36101
  • Gene Type Coding gene
  • Location AWUE01023928.1 : 5262-7642 : positive

Gene Family Information

  • ID HOM05D003704
  • #Genes/#Species 185/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna36101
  • GenBank OMO52091.1
  • id gene37393
  • gene_name COLO4_37421
  • uniprot A0A1R3G1X6

Descriptions

  • Description Intron-binding protein, aquarius
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000398
IEA
GOA DatabasemRNA splicing, via spliceosome
GO:0000398
IEA
InterPromRNA splicing, via spliceosome

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT2G38770
GO:0004386
ISO
PLAZA Homology (enrichment)helicase activity HOM05D003704

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005681
IEA
GOA Databasespliceosomal complex
GO:0005681
IEA
InterProspliceosomal complex
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT2G38770

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR032174 Intron-binding protein aquarius, N-terminal
IPR045055 DNA2/NAM7-like helicase
IPR026300 CWF11 family
Mapman id Description
35.1 not assigned.annotated